CcUC02G038510 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G038510
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr02: 33940487 .. 33945093 (+)
RNA-Seq ExpressionCcUC02G038510
SyntenyCcUC02G038510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTTATTCCTATATCTAGGAACGATAATAACCAAACAATAAAGAAATTCGAATGAAAAACGAAATAAATCCACGATTATCTGACACAAAACTAATCAAAAGATCGCGTTATTGCAATAACCAATGACAATAACAAAACACGAACACAAGAAAAAAAAACTTCGGATTGAGAGCACAGCAACTAGACAGCGCATCATCTTTCCTAACCATTGCTGTGCCGTTCAACATATTCTAAAATCTACGAGAAGCTAATATTAACCATTCCCGTCTCTAAAGTAACTACTGGATTCTCGATCTTTCAAATACGTATGATCCAGTTAAGCTATTCAAATCTCGACTATATTGTGTACTTTCCCTAAAACATTTGTTTCATCTCTACAAACAATTCAGAGCAACAAAATAGAAAGATGGAAAAAGAACATACCCCATGGTTAGTGTGAAAAAAGGATCTCCGAGTGCTAGATTGAGGTAGCAGAGCTCCGGAACCGGCAGAGAGGAAGCTACTTCGGATGACGCCGCCGCACCGTGTGTAAATGAAACCCTAGACTCCTTGGTCCCTTTTTATACTGTAGGGTTGAGTTGAAATACTACTGATTTGCCACCTTGGCAACGCCCTCTTTCAAAATTTGCTTTTATATTTATTTTTTTATTTATAAGTGAGTCGATTGGAAATTTTTAATATATGTTACATTGCAAAACAACAACAATAATAATAAATTAATTAATAAACAACCATAGTAATTAGGATTGGCAACAGGGAATTTACCCCATCCTCGTCGAGGACCCATTTCCAGTTAATCTCTGCAAGAGCGAGTGTAATTAGGATTTGGTTGGGTTTGGGCGTGAGAGAGTGAGAGCGAGACTGTCCTCGGTCAAACCGGGGATTTCCAACCCGATAGGGCCCTGCGGGTTTTTTTTGCCCACCTTAATAGTAAGAAAGGTTATGTCAATTATGATTAACTTTCACTTTGTCCGTTATAATGCAAATTTTATTTTGAAGAGAAGTCAAAATTTAGTCTTTTATAATTTATAATTAAGACTTAGTCCTATGATTTAATAATAGGTTTTACAAATCATACACAGTTTATGAGTTTTTAAGAACAATATGAATAAATCCTAACCTTTGAAACTATAAACACTAAATTCCAACTTTTCCCCAACCTATGAAACCTATGAACTAAACTTGTAATTTAACTTTATTTATTTGTATTTTTTTTTCTTTTTAAGGTTTCTTATTGCAAGTTGCAAGTTAATTAAATCACTTTTTACCTTAGTTATATGCTAGTAGCTAGTTAGTCAAATTGTTTCTAAAATTGTTTAACAAATTAGATTTATGACTTTGTTCTTTAAAAAATATGACTTAATAATGGAAGAAATTTATTTGTCCCTAAACTTGATGACAAATAAATAACAAATTTATTTAGAAAAAAAATTGAAGGAACTATTTCAATTGAATACAACAATCAGATTTTTCTTTTTTCAATTTAGATTTTAATAAATAAAAATTGTTTTAGATTTCATCGGTCTTTTTTTTCAGTTTTTCTATCTCAATCCTTATACAGTTATACAAATATAGACTACAATCTGTATTGCATTTTATCGTAGATAAACAGTATATTTTGCTATTAGTTGTAAATATATTAAACAATTTTGTCATTTAAGATAATTTCCTTTTTTTTTAAGTATAAGTTTTGTAGAAAATTTAAATTTTGATATCAAATGGTGTAGAAAAACTTTCTTTTAAACAAAAACTGGTGTAGAAAAACCTGTGCTACCATAACCAACCTTAAAAAAGAGAAACCTGAATCAATAAGAACTATCCATATGTATAATAAACTTAAGTATTAAACACATATCTTTCAAAATACAAGAATTATGCAATGTTCTGTTGCTAAAGATGACCGCAATCCTGGAAGTAATTCGAATGGTTTCAACAACCAATCCGCTTACAATAATAGTTCAGTCAGATAGTGTAAAGCCTATTCGATTGTTGAATAGAGAGGCCAAGAATCTTGCATCTCTCAAGTCCATACCGAGTGAAGTTCTTTGTTTAGCTCCTTACCATGCTTTTAGCAACAAATTTTTCTTCTAGTTCAGCACAACAAAATGATGTTCCAAAGAAGATAAAATGACATCTCACCTGATAAATAAAATCTAAACTGACTACAGCTCATTCGAGTGGCCAAGAAATATTGTTGGTTAGCATTGATAATACAACAAATTTCTTCCTTTTGAGTTTACAACAACATTTGGAGCGGAGGATTTGAATCATTGACTTCTTGATTGTAGTAACATTATAATACAAGAATGGAGATGATCATCCTCCTAGCGATAGTGTGCCTCACATGGTCTTCCTTCCTCGACAATATAGCATAGCGACAATAGCCTCCATTGAAGCAGACGTCATTTCTCAGTAGTTCCTGGTGTTGCAGCGTTTGATATGTTAAACTAGACTCTGCCTCCTTGTCTTGCACCATCTACATTCTTTTCAAAATTCTTGGTTTCCATTTCTGCACATAATCTACTCCTCTTCGTAAGAAGTTAACTTGACTGCTACATATAAAGCATTAGCAAAGAGGCCTATTTCAAAAGATTATCAACTTGCAGAGTTATAATTCTTTCAAGTATTCCACCTTTCTACACAATACTTTTCCAGCTATTCAATTAATGTATGCTCCTAAGCAAAAGAGAATCGTAGTACTTGCAAGTCAAATTCTTTTGCAAGAACTTTGAGTAACGGCCTGATTATGTAGAGAATATAAGTGCTTTCTGTTATCTATATTTTCAATCTGGGTTTGTTTGGTTTAGGACATAATCACTCTTTGATGGTATAAGTTAATTTTGATTAAAGACAAGGTTCAGGGTCATTTTAAGTATGACAAAATGATTTTAACTATTTTAAAATTACTCCTGAACATGTTCTTAATCTTTAATAGAGATTCCGTCAAGAGAGTGAGAGATGTTAAGTCTATAGAAAGAGATATTTTGAACTGGCAGTTAGCCAATCCGCAAAATGGAGCAATTTTCAGGAGTGAACTCTGTTATGGCTACAAAACAAGTTTGGCATTGGTGGTCCAAGAAGAGCTAGAGGAACATGTCTCAGTCAAATAACACTGTCTTAATCATCCTATTCTTTGTTTATGGCATTCCAATTGGGGGATTAACGAAAACCTAGCAATCAATAAAGATGAATTCTCCAAGAGGAAAGTACAGATGGAGAACTGACAACCCAGCTACATAGATACTCAAATGTTAAGAATATAACTAAAAGATTAAATACACACTACCTAGAATAAACTTTTGAGTTTAAGCCATAATTTAACATTCAAACTCCTGCTGTTGGCAGTCACTTCTAGAATCTCATTCTAATTTTTGCTCTTTGGATTTGGCATACTCTAACATCAAGTAATCTTTTATCTGGAGCATGTGATTATCAGTGTATATACTTTGAGAGGATAGGATCTTTACATTCAACATTGTTTTGTGTAATTGTAGTTATTCCTGAAAGATATGTGTATTTGAGTAATTCCTTACCCATAAAGCATTCAAGTTTAAAGTAATTGGAAGAATATGATAGTGATACTATATCATTTTCAAAACTCATCTGAAACTAGATCTGTTATGTGCCCTAGATAGTTGTTTTTCAATGTACATGAAGAACAATCATAAATTATCCACAATACAAAAACAAATAAAGAGCCTACATTATATCTTACTTGGTATAGTTCACACTTTTGCAGGATTTTCGCGGCACTGTTCTGGACTCCATCTTGTAACTGTGCGTTCTTCAATGGAGTAACTGTCCAAACACGAAGGAGAAACAAAACCGCTTCCATTATCATTGACAGTAAGAACTAACAGCGTTTTTGCAACGCTTCCACAAAGCCGAATTGTGCATAGAAAATCAGACCAAACCCTCAATCGCCCATTTTCATTGCTGCCTTCTCCTTTGGACAACACAAGAACAGCAAATTCAGAGTGAACAAGAGCTGGATGGTGACGATAAGCCACAAAATCAACCCCGTATTGAGATCCAGGTCTCACAACCCAATTCTTCAATCGGAGGTGTCGATAAGCGATGTAAAACTCAGGGAATGTAGACTTTTGGGACTTCATATCCTTCCAAATCTCTTGAAAATTCTTTTCACAGTCTTGTCCATCGACAATTTTAAGGCAGTTCAAATGGTACGACAAGTACAAAGCCTCTTCCATGCCGAATTGAAACCATTGCTTGTCCTTCTCGGCGGAAAGAATCGGTCGACCGAAACAAGCACGATTAAGAAGATCGGTTTGTTCTTCATCGGCTTGATAAAGTACAGTAGAACCAGATAATAATCCTTGAGCGTCCGACTGTGTCAGAGAAGATTGAAGTTGAAATACAGTGTTCGACATGGGATCTGCTAGAGCTTTGGCCTCAGAACCCTTCCCTTTCCATCTCGGCCCCATTGAAGCCGGCGGTGAAACAGTGAAATCGACGGCCTTCGAATTTCAACCAAGGATAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGCAAAAGTGAGGGATATCGCGCTGGGTAATGAGCAGTGGCCTCGGACTGAGCAATGA

mRNA sequence

ATGACTAGCTCCGGAACCGGCAGAGAGGAAGCTACTTCGGATGACGCCGCCGCACCGTGTATGACCGCAATCCTGGAAGTAATTCGAATGGTTTCAACAACCAATCCGCTTACAATAATAGTTCAGTCAGATAGTGTAAAGCCTATTCGATTGTTGAATAGAGAGGCCAAGAATCTTGCATCTCTCAAGTCCATACCGAGTGAATTAGCCAATCCGCAAAATGGAGCAATTTTCAGGAGTGAACTCTGTTATGGCTACAAAACAAGTTTGGCATTGGTGGTCCAAGAAGAGCTAGAGGAACATTCACTTCTAGAATCTCATTCTAATTTTTGCTCTTTGGATTTGGCATACTCTAACATCAAGATTTTCGCGGCACTGTTCTGGACTCCATCTTGTAACTGTGCGTTCTTCAATGGAGTAACTGTCCAAACACGAAGGAGAAACAAAACCGCTTCCATTATCATTGACACGTTTTTGCAACGCTTCCACAAAGCCGAATTGTGCATAGAAAATCAGACCAAACCCTCAATCGCCCATTTTCATTGCTGCCTTCTCCTTTGGACAACACAAGAACAGCAAATTCAGAGTGAACAAGAGCTGGATGGTGACGATAAGCCACAAAATCAACCCCGTATTGAGATCCAGGTCTCACAACCCAATTCTTCAATCGGAGTCTTGTCCATCGACAATTTTAAGGCAGTTCAAATGGTACGACAAGTACAAAGCCTCTTCCATGCCGAATTGAAACCATTGCTTGTCCTTCTCGGCGGAAAGAATCGGTCGACCGAAACAAGCACGATTAAGAAGATCGTGTTCGACATGGGATCTGCTAGAGCTTTGGCCTCAGAACCCTTCCCTTTCCATCTCGGCCCCATTGAAGCCGGCGGTGAAACAGTGAAATCGACGGCCTTCGAATTTCAACCAAGGATAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGCAAAAGTGAGGGATATCGCGCTGGGTAATGAGCAGTGGCCTCGGACTGAGCAATGA

Coding sequence (CDS)

ATGACTAGCTCCGGAACCGGCAGAGAGGAAGCTACTTCGGATGACGCCGCCGCACCGTGTATGACCGCAATCCTGGAAGTAATTCGAATGGTTTCAACAACCAATCCGCTTACAATAATAGTTCAGTCAGATAGTGTAAAGCCTATTCGATTGTTGAATAGAGAGGCCAAGAATCTTGCATCTCTCAAGTCCATACCGAGTGAATTAGCCAATCCGCAAAATGGAGCAATTTTCAGGAGTGAACTCTGTTATGGCTACAAAACAAGTTTGGCATTGGTGGTCCAAGAAGAGCTAGAGGAACATTCACTTCTAGAATCTCATTCTAATTTTTGCTCTTTGGATTTGGCATACTCTAACATCAAGATTTTCGCGGCACTGTTCTGGACTCCATCTTGTAACTGTGCGTTCTTCAATGGAGTAACTGTCCAAACACGAAGGAGAAACAAAACCGCTTCCATTATCATTGACACGTTTTTGCAACGCTTCCACAAAGCCGAATTGTGCATAGAAAATCAGACCAAACCCTCAATCGCCCATTTTCATTGCTGCCTTCTCCTTTGGACAACACAAGAACAGCAAATTCAGAGTGAACAAGAGCTGGATGGTGACGATAAGCCACAAAATCAACCCCGTATTGAGATCCAGGTCTCACAACCCAATTCTTCAATCGGAGTCTTGTCCATCGACAATTTTAAGGCAGTTCAAATGGTACGACAAGTACAAAGCCTCTTCCATGCCGAATTGAAACCATTGCTTGTCCTTCTCGGCGGAAAGAATCGGTCGACCGAAACAAGCACGATTAAGAAGATCGTGTTCGACATGGGATCTGCTAGAGCTTTGGCCTCAGAACCCTTCCCTTTCCATCTCGGCCCCATTGAAGCCGGCGGTGAAACAGTGAAATCGACGGCCTTCGAATTTCAACCAAGGATAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGCAAAAGTGAGGGATATCGCGCTGGGTAATGAGCAGTGGCCTCGGACTGAGCAATGA

Protein sequence

MTSSGTGREEATSDDAAAPCMTAILEVIRMVSTTNPLTIIVQSDSVKPIRLLNREAKNLASLKSIPSELANPQNGAIFRSELCYGYKTSLALVVQEELEEHSLLESHSNFCSLDLAYSNIKIFAALFWTPSCNCAFFNGVTVQTRRRNKTASIIIDTFLQRFHKAELCIENQTKPSIAHFHCCLLLWTTQEQQIQSEQELDGDDKPQNQPRIEIQVSQPNSSIGVLSIDNFKAVQMVRQVQSLFHAELKPLLVLLGGKNRSTETSTIKKIVFDMGSARALASEPFPFHLGPIEAGGETVKSTAFEFQPRIKEEEEEEEEEEEEEAAKVRDIALGNEQWPRTEQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 309..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..343

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G038510.1CcUC02G038510.1mRNA