CcUC02G037980 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G037980
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RAB GTPase homolog 8A
Location	CicolChr02: 33427607 .. 33430385 (+)
RNA-Seq Expression	CcUC02G037980
Synteny	CcUC02G037980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGGTGATGAGCCGCTCTGAATTTTCTTCCCCTTTTTTCGCTAAAATCGCTAAGATGACCCACAGATCACTGTCGATCTCTCTCTAAACTCCCACGCGCCACCTCACGCGTCTCACCGGAGACTCGGTTGCGGCTATTCTCCTGTTTCCTGTCTTGGAATCGGTATATTTCCCTAGCATTTGGGATTTTTCTGCCTTTCTAACTTTTGTTCGTTAATAATGGAGTTTGTTGAGTTTGTGTGTTTTTCTTTTCTTCATTTGGGGTTGTTTTGATGATGTTTTAGGTTATTTCTGAGGGCTGTTTGTTTTCCGAATCGATTTGATTGCAATTGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCAGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTTCGTAATTTCCTTTTCCGTTTCAAATATGGCCTCATTCTTAATATCTTCTTTGAGTTTATCTCATTATCGTTTGTTGATTGGGAAAAATGCGAACATTTTCAATCGGGCATGTTTGTTTTTCTTGGATCTGGGACTGCTCTCCATTTTAGTTTTTCTTTTGGATGATAATGTCGATTGCGCTGAAATTGATTTGGTGATTGAGGACGTTTGTTGCTGAGTCGATGTATTTTTACACTGTAATTTGAACATCTCTATTTTATAGATGTACTGCATTGTTTCTGTTCATTGTAATGCCACCTAATGCTAACGATGTTCTTTGTTTCTGTTCATTTTGGTTGCTTTTTTTTTTTTGCAGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTGTATGAACGTCGATTTTCTATGTGAATGTAAATGCCCATGTCTTGTGGGATTATGGAAGTCACATGGATTAATGTACTTAAAAAACTTTCTTCTGAACTAACTAGATAACTTTTTCCTCCTGCAGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGAATCAAGCTTCAAATTTGGGATACAGCTGGTCAAGAGCGCTTTCGTACAATCACCACAGGTATTATTTTCCACCCTTCATGATTATGGACTGGTTTGTTGCTAAGTGGTGAAATCATGATAGATATCAACATTGTATTGAATGAAATTGATTAGTCTATTCTTTACTGGATCTAATCCTAAATTGTAAATTTTTTGTGGATTCGGACTCTTGATGGTGATGTTGGACAGGATTAGGTTGCAATTTATTCTCTGCTGCATATGGAGATTGATTCTCTTTTCTTCGTTTAACAAGATGTTCTCAGTATTGTTTCATGTGCTAGATAGAGTGTATCATCAGGATTAATGGGGTCATGACTAATATATAGATTAGCAGAGTTTCTCAATTGTTATGTTTGTTGAAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTTAACAGTAAGTACCATTTTACCACTTCTTGCAGATTTTTCTTTTGGTGATTTAATCTTTGTACAAAATTTGCATCGAATCCAACATTTTCATCATTCATTATGGTTTTTCCGATGATGTGGATGGTTAAGGAAGTTTTATGGTCTCCATTTTCGTTGTCATTTTGCCTACTCATGTCCTATTCTCTTCTAACCATTTTCAGATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAATGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGTATGTTACATTCTGCTGTAAAAATGAAAAGAAAGGCATAAACTCTAAATGGTTGTGCTACTCACCTCGCAGCTTGTGAATAAACTGTTGTTGTTACGCACTTTGGACTTCTTATGTGTAGTTGTTACATCAAATTCAAGCAGAAAATACTTACCTAACAGATTTTTAGGGGACAAAAATGTTGTTTAATGAGAAATCTAGCTTCCAAGTCTTCTCTCTAAGAGTACTTTATCTCTGAAGCCCTCACTATTATCATATCTTTTAATATCCTTCTCTTATAGGCTGTCCCTACATCCAAAGGACAGGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTGTGAGTTGCTTGCTCTTCTAACTGTGTAATTTTTTGACAAGAGTGTAAAGTTGTAGGCTGAAAGACATTTGAATTACAGAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATCAAGCAACGTCTCGCTGATACTGATTCAAAAGCCGAGGTATTGTATTGTTTTTCTGCTATAATTTCACTCAAACAATAAGAATCACACAAGCTATAACTTTTTGTTTTCCCATTGTATGCCTAATGCTATAACTTCCCTTGATTTCATGAACCGAAAAGTCTGGCTTTTGTTACGTTTTGCAGCCTTCGACGATCAAGATTAATCAACAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCAGCTTGCTGTGGTTCTTAAGATTATCAAACCCTTTCAAGTAGTCATATATTGATTGAAGTCATACTTCATTGATGGGCGCTTCTAGTTATTTTGTAATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGTACTTTCATGATTTAGAATTTCATTTGTGATCATGTCTATATTATAAAGAGATTTATTTTATTTATTTGGTTTTTCAGAAACGATTATGTCCCAATTATTTGTTTTGCTATAACTTATAAGATGGTTTGTATATAACGCAACTAT

mRNA sequence

ACAGGTGATGAGCCGCTCTGAATTTTCTTCCCCTTTTTTCGCTAAAATCGCTAAGATGACCCACAGATCACTGTCGATCTCTCTCTAAACTCCCACGCGCCACCTCACGCGTCTCACCGGAGACTCGGTTGCGGCTATTCTCCTGTTTCCTGTCTTGGAATCGGTTATTTCTGAGGGCTGTTTGTTTTCCGAATCGATTTGATTGCAATTGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCAGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTATAACTTTTTCCTCCTGCAGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGAATCAAGCTTCAAATTTGGGATACAGCTGGTCAAGAGCGCTTTCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTTAACAATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAATGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTCCCTACATCCAAAGGACAGGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATCAAGCAACGTCTCGCTGATACTGATTCAAAAGCCGAGCCTTCGACGATCAAGATTAATCAACAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCAGCTTGCTGTGGTTCTTAAGATTATCAAACCCTTTCAAGTAGTCATATATTGATTGAAGTCATACTTCATTGATGGGCGCTTCTAGTTATTTTGTAATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGTACTTTCATGATTTAGAATTTCATTTGTGATCATGTCTATATTATAAAGAGATTTATTTTATTTATTTGGTTTTTCAGAAACGATTATGTCCCAATTATTTGTTTTGCTATAACTTATAAGATGGTTTGTATATAACGCAACTAT

Coding sequence (CDS)

ATGGCTGCTCCACCTGCAAGAGCTCGGGCAGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTATAACTTTTTCCTCCTGCAGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGAATCAAGCTTCAAATTTGGGATACAGCTGGTCAAGAGCGCTTTCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTTAACAATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAATGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTCCCTACATCCAAAGGACAGGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATCAAGCAACGTCTCGCTGATACTGATTCAAAAGCCGAGCCTTCGACGATCAAGATTAATCAACAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCAGCTTGCTGTGGTTCTTAA

Protein sequence

MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS

Homology

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BLAST of CcUC02G037980 vs. NCBI nr
Match: XP_008448379.1 (PREDICTED: ras-related protein RABE1c [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 7.8e-112
Identity = 216/224 (96.43%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS
Sbjct: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. NCBI nr
Match: XP_004148215.1 (ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Csa_022967 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 214/224 (95.54%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS
Sbjct: 181 IGRDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. NCBI nr
Match: XP_038900654.1 (ras-related protein RABE1c [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 215/224 (95.98%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRLADTDSKAEP TIKINQQDQGANAGQAAQKSACCGS
Sbjct: 181 IARDIKQRLADTDSKAEPLTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. NCBI nr
Match: XP_022148361.1 (ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-related protein RABE1c-like [Momordica charantia])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 214/223 (95.96%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCG 224
           IARDIKQRLADTDSKAEPSTIKIN QDQGANAGQAAQKSACCG
Sbjct: 181 IARDIKQRLADTDSKAEPSTIKIN-QDQGANAGQAAQKSACCG 214

[Close]

BLAST of CcUC02G037980 vs. NCBI nr
Match: KAG6570726.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010570.1 Ras-related protein RABE1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-109
Identity = 212/224 (94.64%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 160 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 219

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 220 KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 279

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 280 IEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFS 339

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRL+DTDSKAE STIKINQQDQGANAGQAAQKS+CCGS
Sbjct: 340 IARDIKQRLSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 375

[Close]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-109
Identity = 205/224 (91.52%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRL+DTDS+AEP+TIKI+Q DQ A AGQA QKSACCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.4e-108
Identity = 203/224 (90.62%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IA+DIKQRLADTD++AEP TIKINQ DQGA   QA QKSACCG+
Sbjct: 181 IAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.4e-102
Identity = 199/225 (88.44%), Postives = 204/225 (90.67%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPS-TIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRLAD+D++ E   +I I   DQ  N  QAA KSACCGS
Sbjct: 181 IARDIKQRLADSDTRQEAQPSITIKPADQSGN--QAAAKSACCGS 215

[Close]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98
Identity = 187/222 (84.23%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIG        IDF
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++N
Sbjct: 61  KIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF S
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACC 223
           IA+DIKQRL +TD+KAEP  IKI +QD  A++   A+KSACC
Sbjct: 181 IAKDIKQRLTETDTKAEPQGIKITKQDTAASS-STAEKSACC 213

[Close]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 9.6e-97
Identity = 184/223 (82.51%), Postives = 199/223 (89.24%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIG        IDF
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++N
Sbjct: 61  KIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF S
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQG-ANAGQAAQKSACC 223
           IA+DIKQRL ++D+KAEP  IKI +QD   A++    +KSACC
Sbjct: 181 IAKDIKQRLTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL
Match: A0A1S3BJJ0 (ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112
Identity = 216/224 (96.43%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS
Sbjct: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL
Match: A0A0A0KHW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 214/224 (95.54%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS
Sbjct: 181 IGRDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL
Match: A0A6J1D4V3 (ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.0e-110
Identity = 214/223 (95.96%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCG 224
           IARDIKQRLADTDSKAEPSTIKIN QDQGANAGQAAQKSACCG
Sbjct: 181 IARDIKQRLADTDSKAEPSTIKIN-QDQGANAGQAAQKSACCG 214

[Close]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL
Match: A0A6J1FYD5 (ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.9e-110
Identity = 212/224 (94.64%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRL+DTDSKAE STIKINQQDQGANAGQAAQKS+CCGS
Sbjct: 181 IARDIKQRLSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 216

[Close]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL
Match: A0A6J1CS03 (ras-related protein RABE1a-like OS=Momordica charantia OX=3673 GN=LOC111013648 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 212/224 (94.64%), Postives = 212/224 (94.64%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IARDIKQRLADTDSKAEP TIKINQ DQGA A QAAQKSACCGS
Sbjct: 181 IARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAAQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 397.9 bits (1021), Expect = 5.4e-111
Identity = 207/224 (92.41%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IA+DIKQRLADTDS+AEP+TIKI+Q DQ A AGQA QKSACCGS
Sbjct: 181 IAKDIKQRLADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of CcUC02G037980 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-110
Identity = 205/224 (91.52%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRL+DTDS+AEP+TIKI+Q DQ A AGQA QKSACCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CcUC02G037980 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-110
Identity = 205/224 (91.52%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRL+DTDS+AEP+TIKI+Q DQ A AGQA QKSACCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CcUC02G037980 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-110
Identity = 205/224 (91.52%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           I RDIKQRL+DTDS+AEP+TIKI+Q DQ A AGQA QKSACCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CcUC02G037980 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-109
Identity = 203/224 (90.62%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGCITFSSCSIDF 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG        IDF
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--------IDF 60

Query: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120
           KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN
Sbjct: 61  KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 120

Query: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180
           IEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFS
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFS 180

Query: 181 IARDIKQRLADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 225
           IA+DIKQRLADTD++AEP TIKINQ DQGA   QA QKSACCG+
Sbjct: 181 IAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of CcUC02G037980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448379.1	7.8e-112	96.43	PREDICTED: ras-related protein RABE1c [Cucumis melo]	[more]
XP_004148215.1	3.0e-111	95.54	ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Cs...	[more]
XP_038900654.1	3.9e-111	95.98	ras-related protein RABE1c [Benincasa hispida]	[more]
XP_022148361.1	1.2e-109	95.96	ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-relate...	[more]
KAG6570726.1	1.6e-109	94.64	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of CcUC02G037980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	2.2e-109	91.52	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	2.4e-108	90.63	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	3.4e-102	88.44	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	1.0e-98	84.23	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	9.6e-97	82.51	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of CcUC02G037980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJJ0	3.8e-112	96.43	ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1	[more]
A0A0A0KHW0	1.4e-111	95.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1	[more]
A0A6J1D4V3	6.0e-110	95.96	ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 P...	[more]
A0A6J1FYD5	7.9e-110	94.64	ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE...	[more]
A0A6J1CS03	1.3e-109	94.64	ras-related protein RABE1a-like OS=Momordica charantia OX=3673 GN=LOC111013648 P...	[more]

BLAST of CcUC02G037980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59840.1	5.4e-111	92.41	Ras-related small GTP-binding family protein	[more]
AT3G46060.1	1.6e-110	91.52	RAB GTPase homolog 8A	[more]
AT3G46060.2	1.6e-110	91.52	RAB GTPase homolog 8A	[more]
AT3G46060.3	1.6e-110	91.52	RAB GTPase homolog 8A	[more]
AT3G53610.1	1.7e-109	90.63	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 127..140 score: 51.25 coord: 16..37 score: 55.38 coord: 65..87 score: 57.68 coord: 163..185 score: 47.39 coord: 39..55 score: 24.86
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..221 e-value: 8.2E-6 score: 33.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..188 e-value: 3.5E-101 score: 352.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 17..188 e-value: 1.2E-32 score: 124.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..224
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..222
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 1..222
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..222 score: 36.913231
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..190 score: 11.766924
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 13..188 e-value: 2.45382E-118 score: 331.925
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..188 e-value: 8.9E-14 score: 56.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..186 e-value: 1.8E-62 score: 209.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..224 score: 20.924856
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..222 e-value: 1.3E-73 score: 248.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..204
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..178 e-value: 1.3E-28 score: 97.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G037980.1	CcUC02G037980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003925	G protein activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity