CcUC02G037620 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G037620
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr02: 33218007 .. 33221591 (-)
RNA-Seq Expression	CcUC02G037620
Synteny	CcUC02G037620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCGTTTGGGGAAGATCAAGAAGATTCAACCATTTTCCCAAGAACTCATAATTAAAACAAACAATGACCCCTAAAGAATTTAGACCTTTTGCCATTTACCAATTCCAACTTTGATATTACACATTTGGCAACGCCTTCTTCTTCCATACCAAAGTGGGCAAAAAAGTCTGCCACTTCGTTTTCGTTTTTCCTGAGGATGAAGCCTTGACCTATTCATTCTTTCACAGAAATTTACACAATCAATTAATGGCTCAATTGCTGTTTGTTGCGACAGTAACGAAATTGACAAGAAAAAAAACCGTAAAAGCATCAACAATAAAGATCGACATAGAGATTTACGTGGTTCACTAACAATGTGTTAGCTACATCCACGAACAAAGTTGATGACTCTTTTATTATTCGATAGAAATATCAAATAATACAAATCAAGAGGCGCCAATAAAATTAGAGAATTCACATATAACACCCCTTTAAGAGTCTAGATCCAAAGCTTTCCAACCTTCATTGTAATGATGGTCCTCATCCAGTCTATTCTTGATCTTTAGAATTTGCATTTATTGACCCCAAGAAAATGTGTTGATCAAACCTCGGAAAAATTAGGAAACAAGGTAACGAAGTGAGCCAACTGAAATCTACTATTCCCTTGGATTTTTACAGGTATACCAAAAAACAGAGAAAAAGGAGGAAGACCCTCCATATGCTATGCTTTCATTACCAAAGTAAGAGAGCAAAAGAATAAGCATGGTTTTTCACCAAGTCCTCACCAACCCAGGTGTCCAATTTCTCCAATCTAACTTCCCAAAAGATCTGTTTCTTAAACTCACCATATCTCTGAAATCAAAAACCTTCTTAAGATGACTAGTTCTATGTCTTGTAGTAGCAGGTTCAACTTCTGCCTCCTCTACACTTTCTTCCGTTGTTTCAACAATTCCGTCGACAGGTTGAACAATTGTTTCGTGATCTTGACATGATTCACTGATGATATTACCAAGAATCTCAACGACTTCACTCATTTTCGGGCGATTCTTAGGCTGCTTCATCAGGCATTTGTTAGCCAGTGATGCAAGTTTCTGTGCTGACTTGATGTTGCATTCTCCTTCAAGCCGTGGGTCGACAATAAGATGGAATTTCTTAGGGTCTGAGACATATGGTTTAATCCATTCCAAAAGCTTCTGCTCATTGCGCGGTAAGTTTCTCTCCACGGCTCGTCTACCAGTAATGAGTTCATAGAGAACTACTCCGAAACTCCACACGTCGCTCTTTGCAGTCAACCTGCCAGTCTGAACATACTCTGGAGCTGCATAGCCTATTGTGCCCACAACCTTCAAAGACAAGTAAATTGTCATCACATCAGAAGTAAACATCTACTGTACTTGAGAATTACTACAGGACCATTACTTCAGAGGTAATGAGCCAATGGCTTAAAAGCAATAATGTAACGCATGCCTATTTAGAAGCTAAAATCCAAAAAAAACATGCTATTGGAATCATTATAGTACTGAAAAGTTGTCCAATCCAATAAAATTAAGGAACTGTTTGGATTGATCTTCGAGGTGCTTAAAAACCCTTACTTCAGAAGCAATGATCCAATGGCTTAAAAGCAATAATGCAACATATGCCTATTTAGAAGCTAAAATCCAAAAGAACATACTAAAGGGACAAGTATAGTACTAAAACATTTTCCAATCCAATAAGATAAAGGATATGTTTAGATTATCTTTAAAGTGCTTAAAGACTCTTAATCCAGAAGTAATGATCCAATGAATGCAACATATGTCAATTTAAAAGCTAAAATCCAAAAGAACGTACTAAAGGGATTAGTATAGTACTAAAACATTTTCCAATCCAATAAGATTAAGAATCTGTTTGGATTGATCTACGTAATGCTTAAAAATATATTTTTTAAGTATTTAGAAGGTCAATCTGTTTTTAAGCATTTAGAAAGTGAATCCAAACAGATCCTAGACATACCGATGTTGACACATGACTGATTCCTTCCGGAGGACCCTGTCTAGCGAGTCCAAAATCCGAAAGCTTTGCATTAAATTCTTCATCTAACAGGATATTTGAAGCTTTTAAATCACGGAAAATTAGCTGCATCGTCCGAGAACAAAATCGAGTCACTTAAATATGAAAGCCAGAAGCAACTATCAACCACACACATACTTCCCACAAGACAAAGAAATCTATATTTACTTCACATGGCATGGCAGACAAGTTAACATCTGAAACGTCAGGGATGGAATAATAACAGTAGAATCAAAGAACCCACAGTCCGATTGTTGTTGTCAATTTCAGGCAACAAAGCAGAATATGATTTCATTTTGTACCTGAAAATCCATTTCTTCATGTAGATATGCAAGGCCACGAGCTGCATCCTGAGCAATTTTAAGCCTTGCCAACCATGACAATGGTGGAGATACTCTAACCAAAAGATGGTCTTCCAAGCTCCTGTTGCGCATAAGCTCATAAACCAAAAGCCTTTGCATTCCCCTTTCATCATCTTCTGCACAATATCCGACTAATTTCACTAGATTCGGATGTTTCACCACACCCAAAAAGTTCACCTCATTGATCCACTCCTTGTGCCCCTGAATACTAGAATTTGTTTGAAAATTCAATCAGATTTGAACCATTACCAATTTGGGGTTCCAATACATTTAAATACCATTAGTAATAAAACAGATTCAAACTTAGCATTCAATAAAACAAAGAGATTCCAAACATTGAAAAACAAAAATGAACACTAAGAAGGCAAAATAGAAAGACATGCCTGGAAGCCATTGCGATTGAGCTGTTTAATAGCAACCTCCATCTTCAAATCCGACTTGGAATTGGAGCCATCATTACCATCTTCATAAGCCCTAACAACTCCTTTAAACACACACCCAAAACCTCCTTCGCCAATCAACAGCGCTCTACTAAACCCTCGAGTGGCCGATCTCAACTCGGAAAAAGAAAAAACCCGCAAATCATTCGCTCTACGATGAGTCAAAAACTCATAAAACCCAATCGAGTCAGAAAAATCCCTAGAATACTCAGAGTCAAACTCAGACCTTCTGGTATCGAACGTGCTTGAAGCCATACTAAGCGAGCGAGCCCAGGAAACCTTGGAAGCTCTAGAAACGACACCGTCTTCATCATCCCTTCTCTCGCCATTGGTGAAGTGGAAGCACTTCATAGCTTCAAAACAAGTTCTGGGGTTGCAGAATCGGAATGTTGGAAAAGGGAAAAAGGGGGTTGTGAGGGAGAAGAAGACTAGTCAAATGAGAAGAAAATGGGAAAGAACAAGTGGGTTTGGTTGAGCGTTTACATATTGTAATTTGAAAATGGAAGAGCGTTAGGTAGCAGCACAAAGAAAGAGAGAGAAAGAGAAAGAGACCCATTTCCATTTGGGCCATTGTCGTTTATAGCGAGAGAATTCGGAAGAAAGGAGAGAGAATTGGAGGATCACGAGGGCTTGCTTTTGCTGCAGACCCAGACGCTGAACGCCAAAAATGGATCAGGTAGCTCAGTTGAAACTGGAAGGAGGGTCCCTCCCAGTCACAGCCGTTCGTTGAGGGACTTGCTTCGAAATTAG

mRNA sequence

ATGAGGTATACCAAAAAACAGAGAAAAAGGAGGAAGACCCTCCATATGCTATGCTTTCATTACCAAAGTTCAACTTCTGCCTCCTCTACACTTTCTTCCGTTGTTTCAACAATTCCGTCGACAGGCTGCTTCATCAGGCATTTGTTAGCCAGTGATGCAAGTTTCTGTGCTGACTTGATGTTGCATTCTCCTTCAAGCCGTGGGTCGACAATAAGATGGAATTTCTTAGGGTCTGAGACATATGGTTTAATCCATTCCAAAAGCTTCTGCTCATTGCGCGTTTCTCTCCACGGCTCGTCTACCAGTAATGAGTTCATAGAGAACTACTCCGAAACTCCACACGTCGCTCTTTGCAGTCAACCTGCCAGTCTGAACATACTCTGGAGCTGCATAGCCTATTGTGCCCACAACCTTCAAAGACAAGACCATTACTTCAGAGGATATTTGAAGCTTTTAAATCACGGAAAATTAGCTGCATCGTCCGAGAACAAAATCGAGTCACTTAAATATGAAAGCCAGAAGCAACTATCAACCACACACATACTTCCCACAAGACAAAGAAATCTATATTTACTTCACATGGCATGGCAGACAAGCAACAAAGCAGAATATGATTTCATTTTGTACCTGAAAATCCATTTCTTCATGCAAAATAGAAAGACATGCCTGGAAGCCATTGCGATTGAGCTGTTTAATAGCAACCTCCATCTTCAAATCCGACTTGGAATTGGAGCCATCATTACCATCTTCATAAGCCCTAACAACTCCTTTAAACACACACCCAAAACCTCCTTCGCCAATCAACAGCGCTCTACTAAACCCTCGAGTGGCCGATCTCAACTCGGAAAAAGAAAAAACCCGCAAATCATTCGCTCTACGATGAGTCAAAAACTCATAAAACCCAATCGAGTCAGAAAAATCCCTAGAATACTCAGAGTCAAACTCAGACCTTCTGGTATCGAACCCATACTAAGCGAGCGAGCCCAGGAAACCTTGGAAGCTCTAGAAACGACACCGTCTTCATCATCCCTTCTCTCGCCATTGGTGAAGTGGAAGCACTTCATAGCTTCAAAACAAGTTCTGGGGTTGCAGAATCGGAATGTTGGAAAAGGGAAAAAGGGGGTTGTGAGGGAGAAGAAGACTAGTCAAATGAGAAGAAAATGGGAAAGAACAAGTGGAGCGTTAGGTAGCAGCACAAAGAAAGAGAGAGAAAGAGAAAGAGACCCATTTCCATTTGGGCCATTGTCGTTTATAGCGAGAGAATTCGGAAGAAAGGAGAGAGAATTGGAGGATCACGAGGGCTTGCTTTTGCTGCAGACCCAGACGCTGAACGCCAAAAATGGATCAGGTAGCTCAGTTGAAACTGGAAGGAGGGTCCCTCCCAGTCACAGCCGTTCGTTGAGGGACTTGCTTCGAAATTAG

Coding sequence (CDS)

ATGAGGTATACCAAAAAACAGAGAAAAAGGAGGAAGACCCTCCATATGCTATGCTTTCATTACCAAAGTTCAACTTCTGCCTCCTCTACACTTTCTTCCGTTGTTTCAACAATTCCGTCGACAGGCTGCTTCATCAGGCATTTGTTAGCCAGTGATGCAAGTTTCTGTGCTGACTTGATGTTGCATTCTCCTTCAAGCCGTGGGTCGACAATAAGATGGAATTTCTTAGGGTCTGAGACATATGGTTTAATCCATTCCAAAAGCTTCTGCTCATTGCGCGTTTCTCTCCACGGCTCGTCTACCAGTAATGAGTTCATAGAGAACTACTCCGAAACTCCACACGTCGCTCTTTGCAGTCAACCTGCCAGTCTGAACATACTCTGGAGCTGCATAGCCTATTGTGCCCACAACCTTCAAAGACAAGACCATTACTTCAGAGGATATTTGAAGCTTTTAAATCACGGAAAATTAGCTGCATCGTCCGAGAACAAAATCGAGTCACTTAAATATGAAAGCCAGAAGCAACTATCAACCACACACATACTTCCCACAAGACAAAGAAATCTATATTTACTTCACATGGCATGGCAGACAAGCAACAAAGCAGAATATGATTTCATTTTGTACCTGAAAATCCATTTCTTCATGCAAAATAGAAAGACATGCCTGGAAGCCATTGCGATTGAGCTGTTTAATAGCAACCTCCATCTTCAAATCCGACTTGGAATTGGAGCCATCATTACCATCTTCATAAGCCCTAACAACTCCTTTAAACACACACCCAAAACCTCCTTCGCCAATCAACAGCGCTCTACTAAACCCTCGAGTGGCCGATCTCAACTCGGAAAAAGAAAAAACCCGCAAATCATTCGCTCTACGATGAGTCAAAAACTCATAAAACCCAATCGAGTCAGAAAAATCCCTAGAATACTCAGAGTCAAACTCAGACCTTCTGGTATCGAACCCATACTAAGCGAGCGAGCCCAGGAAACCTTGGAAGCTCTAGAAACGACACCGTCTTCATCATCCCTTCTCTCGCCATTGGTGAAGTGGAAGCACTTCATAGCTTCAAAACAAGTTCTGGGGTTGCAGAATCGGAATGTTGGAAAAGGGAAAAAGGGGGTTGTGAGGGAGAAGAAGACTAGTCAAATGAGAAGAAAATGGGAAAGAACAAGTGGAGCGTTAGGTAGCAGCACAAAGAAAGAGAGAGAAAGAGAAAGAGACCCATTTCCATTTGGGCCATTGTCGTTTATAGCGAGAGAATTCGGAAGAAAGGAGAGAGAATTGGAGGATCACGAGGGCTTGCTTTTGCTGCAGACCCAGACGCTGAACGCCAAAAATGGATCAGGTAGCTCAGTTGAAACTGGAAGGAGGGTCCCTCCCAGTCACAGCCGTTCGTTGAGGGACTTGCTTCGAAATTAG

Protein sequence

MRYTKKQRKRRKTLHMLCFHYQSSTSASSTLSSVVSTIPSTGCFIRHLLASDASFCADLMLHSPSSRGSTIRWNFLGSETYGLIHSKSFCSLRVSLHGSSTSNEFIENYSETPHVALCSQPASLNILWSCIAYCAHNLQRQDHYFRGYLKLLNHGKLAASSENKIESLKYESQKQLSTTHILPTRQRNLYLLHMAWQTSNKAEYDFILYLKIHFFMQNRKTCLEAIAIELFNSNLHLQIRLGIGAIITIFISPNNSFKHTPKTSFANQQRSTKPSSGRSQLGKRKNPQIIRSTMSQKLIKPNRVRKIPRILRVKLRPSGIEPILSERAQETLEALETTPSSSSLLSPLVKWKHFIASKQVLGLQNRNVGKGKKGVVREKKTSQMRRKWERTSGALGSSTKKERERERDPFPFGPLSFIAREFGRKERELEDHEGLLLLQTQTLNAKNGSGSSVETGRRVPPSHSRSLRDLLRN

Homology

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BLAST of CcUC02G037620 vs. ExPASy TrEMBL
Match: A0A2P2P243 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-04
Identity = 35/71 (49.30%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 29  STLSSVVSTIPST--------GCFIRHLLASDASFCADLMLHSPSSRGSTIRWNFLGSET 88
           S  S ++ TI +T         C  RH LA+ ASF ADL L  PSS GS I+ NF  SE 
Sbjct: 120 SVTSMILFTISTTSLILGRALACLARHRLATTASFWADLRLCFPSSLGSKIKRNFFESER 179

Query: 89  YGLIHSKSFCS 92
            GL HS SFCS
Sbjct: 180 CGLTHSNSFCS 190

The following BLAST results are available for this feature:

BLAST of CcUC02G037620 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G037620 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G037620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P2P243	4.2e-04	49.30	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of CcUC02G037620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G037620.1	CcUC02G037620.1	mRNA