CcUC02G037610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G037610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	flowering-promoting factor 1-like
Location	CicolChr02: 33205805 .. 33206194 (+)
RNA-Seq Expression	CcUC02G037610
Synteny	CcUC02G037610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGTGTTTGGGTGTTCGACAAAAGTGGCGTGGCTCGTTTAATATCCAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCTCCCCATCCAGGCACCGCCACCGCGCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCTAGTCATCCGGTCCTACGCCGAACTCGAGCAGTGCCTGGCCGAACTCGGGTGGAGTCGGTACCGAAATTTAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCCCATGACTCGGCTCACTTGATTTCCCTCCCCAAAAGCTTCGCTAAGTTCAAGCCCATGCATATGTACGACATTGTTGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGACCCTACGTCATCACTACCTTCCTAG

mRNA sequence

ATGTCCGGTGTTTGGGTGTTCGACAAAAGTGGCGTGGCTCGTTTAATATCCAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCTCCCCATCCAGGCACCGCCACCGCGCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCTAGTCATCCGGTCCTACGCCGAACTCGAGCAGTGCCTGGCCGAACTCGGGTGGAGTCGGTACCGAAATTTAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCCCATGACTCGGCTCACTTGATTTCCCTCCCCAAAAGCTTCGCTAAGTTCAAGCCCATGCATATGTACGACATTGTTGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGACCCTACGTCATCACTACCTTCCTAG

Coding sequence (CDS)

ATGTCCGGTGTTTGGGTGTTCGACAAAAGTGGCGTGGCTCGTTTAATATCCAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCTCCCCATCCAGGCACCGCCACCGCGCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCTAGTCATCCGGTCCTACGCCGAACTCGAGCAGTGCCTGGCCGAACTCGGGTGGAGTCGGTACCGAAATTTAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCCCATGACTCGGCTCACTTGATTTCCCTCCCCAAAAGCTTCGCTAAGTTCAAGCCCATGCATATGTACGACATTGTTGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGACCCTACGTCATCACTACCTTCCTAG

Protein sequence

MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQVRDPTSSLPS

Homology

[Close]

BLAST of CcUC02G037610 vs. NCBI nr
Match: KAG6570697.1 (Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010544.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 118/129 (91.47%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK+GVARLISNPTRESFECKDPP+PGTATAPGARPRVLVYLPTN VIRSYAEL
Sbjct: 1   MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIRSYAEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L ELGWSRYRN AEP+LLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNR FF+V
Sbjct: 61  EQRLGELGWSRYRNSAEPDLLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRHFFEV 120

Query: 121 RDPTSSLPS 130
           RDP SS PS
Sbjct: 121 RDPKSSHPS 129

[Close]

BLAST of CcUC02G037610 vs. NCBI nr
Match: XP_022148408.1 (flowering-promoting factor 1-like [Momordica charantia])

HSP 1 Score: 217.6 bits (553), Expect = 6.2e-53
Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK+GVARLI+NPTRESFE KDPP+PGTATAPGARPRVLVYLP N VI SYAEL
Sbjct: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60

Query: 61  EQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFF 120
           EQ L ELGW+RYRN  AEP EL++FHRSHDSA LISLPKSFAKFKPMHMYDIVVKNR FF
Sbjct: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPTSSLPS 130
           QVRDP S+  S
Sbjct: 121 QVRDPKSAAAS 131

[Close]

BLAST of CcUC02G037610 vs. NCBI nr
Match: KAG6760852.1 (hypothetical protein POTOM_034035 [Populus tomentosa])

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51
Identity = 99/126 (78.57%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVW+FDK+GVARLI+NPTRESFE K+PPHPGTATAPGARPRVLVYLP N VIRSY EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPHPGTATAPGARPRVLVYLPANHVIRSYTEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ LAELGW+RY N  +P LLQFH+S DS HLISLP+ F  FKP+HMYDIVVKNR FF+V
Sbjct: 61  EQRLAELGWTRYYNSNQPNLLQFHKSDDSTHLISLPRDFDSFKPLHMYDIVVKNRSFFEV 120

Query: 121 RDPTSS 127
           RDP +S
Sbjct: 121 RDPAAS 126

[Close]

BLAST of CcUC02G037610 vs. NCBI nr
Match: EOY34019.1 (FPF1-like protein 1 [Theobroma cacao])

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51
Identity = 98/123 (79.67%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK GVARLI+NPT+ESFE KDP +PGT+TAPGARPRVLVYLPTN VI SYAEL
Sbjct: 38  MSGVWVFDKKGVARLITNPTKESFEQKDPIYPGTSTAPGARPRVLVYLPTNQVISSYAEL 97

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQCLAELGW+RY N+++P+LLQFH+S  SAHLISLP++FA  +PMHMYDIVVKNR FF+V
Sbjct: 98  EQCLAELGWTRYNNISQPDLLQFHKSDASAHLISLPRNFANLRPMHMYDIVVKNRSFFEV 157

Query: 121 RDP 124
           RDP
Sbjct: 158 RDP 160

[Close]

BLAST of CcUC02G037610 vs. NCBI nr
Match: XP_017982496.1 (PREDICTED: flowering-promoting factor 1 [Theobroma cacao])

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51
Identity = 98/123 (79.67%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK GVARLI+NPT+ESFE KDP +PGT+TAPGARPRVLVYLPTN VI SYAEL
Sbjct: 1   MSGVWVFDKKGVARLITNPTKESFEQKDPIYPGTSTAPGARPRVLVYLPTNQVISSYAEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQCLAELGW+RY N+++P+LLQFH+S  SAHLISLP++FA  +PMHMYDIVVKNR FF+V
Sbjct: 61  EQCLAELGWTRYNNISQPDLLQFHKSDASAHLISLPRNFANLRPMHMYDIVVKNRSFFEV 120

Query: 121 RDP 124
           RDP
Sbjct: 121 RDP 123

[Close]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 61/122 (50.00%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVF K+GV RL+ NP +   +              +R +V+VYLPT  VI SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQSGGD------------TNSRRKVMVYLPTGEVISSYSTL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L  LGW RY    + +LLQFH+   S  LISLPK F KF  ++MYDIVVKN  +F V
Sbjct: 61  EQILRSLGWERYFGGGDTDLLQFHK-RSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHV 108

Query: 121 RD 123
           RD
Sbjct: 121 RD 108

[Close]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23
Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVF K+GV RL+ NP +   + ++            R +V+VYLPT  V+ SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQSGSDTQN------------RRKVMVYLPTGEVVSSYSTL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L  LGW RY    + +LLQFH+   S  LISLP+ F KF  ++MYDIVVKN  +F V
Sbjct: 61  EQILQSLGWERYFGGGDTDLLQFHK-RSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHV 108

Query: 121 RD 123
           RD
Sbjct: 121 RD 108

[Close]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAE 60
           MSGVWVF+K+GV RL+ NP  +S  +  +    G       R ++LV+LP++ V+ SY  
Sbjct: 1   MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60

Query: 61  LEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFF 120
           LE+ L  LGW RY +    + LLQFH+   S  LISLP+ F+KF  +HMYDIVVKN   F
Sbjct: 61  LEKILKNLGWERYYSGDNTDHLLQFHK-RTSIDLISLPRDFSKFNSIHMYDIVVKNPNVF 120

Query: 121 QVRD 123
            VRD
Sbjct: 121 HVRD 123

[Close]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-22
Identity = 61/123 (49.59%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNP-TRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAE 60
           M+GVWVF K G+ R + NP + ES    D          G R +VLV++P+  V+ SY  
Sbjct: 1   MAGVWVF-KDGIVRRVENPGSEESSSAGD-------GGGGGRRKVLVHVPSGEVVASYEV 60

Query: 61  LEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQ 120
           LE+ L ELGW RY  L +P LLQFH+   + HLIS+P+ F+KFK +HMYDIVVK R  F+
Sbjct: 61  LERRLRELGWERY--LTDPCLLQFHQ-RSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFE 112

Query: 121 VRD 123
           VRD
Sbjct: 121 VRD 112

[Close]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVF ++GV +L+ NP   +         G     G R + L+++PT  V+ SYA L
Sbjct: 1   MSGVWVF-RNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASL 60

Query: 61  EQCLAELGWSRYRN------LAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKN 120
           E+ LA LGW RY +       A   +LQFH+   S  LISLPK F++F  +HMYDIVVKN
Sbjct: 61  ERKLAALGWERYYSGGGGAAAAAAMMLQFHK-RSSVDLISLPKDFSQFGSVHMYDIVVKN 120

Query: 121 RQFFQVRD 123
           R  F+V D
Sbjct: 121 RDAFRVID 126

[Close]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL
Match: A0A0A0KE84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190350 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK+GVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTN VIRSYAEL
Sbjct: 1   MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNQVIRSYAEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ LAELGW+RY NLAEP+LLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNR FFQV
Sbjct: 61  EQRLAELGWTRYPNLAEPDLLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRHFFQV 120

Query: 121 RDPTSS 127
           RDPTSS
Sbjct: 121 RDPTSS 126

[Close]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL
Match: A0A6J1D405 (flowering-promoting factor 1-like OS=Momordica charantia OX=3673 GN=LOC111017063 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.0e-53
Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK+GVARLI+NPTRESFE KDPP+PGTATAPGARPRVLVYLP N VI SYAEL
Sbjct: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60

Query: 61  EQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFF 120
           EQ L ELGW+RYRN  AEP EL++FHRSHDSA LISLPKSFAKFKPMHMYDIVVKNR FF
Sbjct: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPTSSLPS 130
           QVRDP S+  S
Sbjct: 121 QVRDPKSAAAS 131

[Close]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL
Match: A0A061H020 (FPF1-like protein 1 OS=Theobroma cacao OX=3641 GN=TCM_041825 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 98/123 (79.67%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVFDK GVARLI+NPT+ESFE KDP +PGT+TAPGARPRVLVYLPTN VI SYAEL
Sbjct: 38  MSGVWVFDKKGVARLITNPTKESFEQKDPIYPGTSTAPGARPRVLVYLPTNQVISSYAEL 97

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQCLAELGW+RY N+++P+LLQFH+S  SAHLISLP++FA  +PMHMYDIVVKNR FF+V
Sbjct: 98  EQCLAELGWTRYNNISQPDLLQFHKSDASAHLISLPRNFANLRPMHMYDIVVKNRSFFEV 157

Query: 121 RDP 124
           RDP
Sbjct: 158 RDP 160

[Close]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL
Match: A0A1R3HBS3 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20321 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 97/124 (78.23%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVW+FDK GVARLISNPTRESFE KDP +PGT+TAPGARPRVLVYLPTN VIRSY+EL
Sbjct: 1   MSGVWIFDKKGVARLISNPTRESFEQKDPIYPGTSTAPGARPRVLVYLPTNQVIRSYSEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L ELGW+RY NL++PELLQFH+S++S HLISLP++FA F+ +HMYDIVVKNR FF+V
Sbjct: 61  EQRLGELGWTRYYNLSQPELLQFHKSNNSVHLISLPRNFANFRSLHMYDIVVKNRSFFEV 120

Query: 121 RDPT 125
           RDP+
Sbjct: 121 RDPS 124

[Close]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL
Match: A0A4U5QFB7 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000093850 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 98/126 (77.78%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVW+FDK+GVARLI+NPTRESFE K+PPHPGTATAPGARPRVLVYLP N  IRSY EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPHPGTATAPGARPRVLVYLPANHAIRSYTEL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ LAELGW+RY N  +  LLQFH+S DSAHLISLP+ F  FKP+HMYDIVVKNR FF+V
Sbjct: 61  EQRLAELGWTRYYNSNQTNLLQFHKSDDSAHLISLPRDFDSFKPLHMYDIVVKNRSFFEV 120

Query: 121 RDPTSS 127
           RDP +S
Sbjct: 121 RDPAAS 126

[Close]

BLAST of CcUC02G037610 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVF K+GV RL+ NP +   + ++            R +V+VYLPT  V+ SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQSGSDTQN------------RRKVMVYLPTGEVVSSYSTL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L  LGW RY    + +LLQFH+   S  LISLP+ F KF  ++MYDIVVKN  +F V
Sbjct: 61  EQILQSLGWERYFGGGDTDLLQFHK-RSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHV 108

Query: 121 RD 123
           RD
Sbjct: 121 RD 108

[Close]

BLAST of CcUC02G037610 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 107.5 bits (267), Expect = 8.4e-24
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAE 60
           MSGVWVF+K+GV RL+ NP  +S  +  +    G       R ++LV+LP++ V+ SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFF 120
           LE+ L  LGW RY +    + LLQFH+   S  LISLP+ F+KF  +HMYDIVVKN   F
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHK-RTSIDLISLPRDFSKFNSIHMYDIVVKNPNVF 177

Query: 121 QVRD 123
            VRD
Sbjct: 178 HVRD 180

[Close]

BLAST of CcUC02G037610 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 7.1e-23
Identity = 58/122 (47.54%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MSGVWVFDKSGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAEL 60
           MSGVWVF+ +GV RL+ NP +           G +T    R  VLVYLPT   + SY+ L
Sbjct: 1   MSGVWVFN-NGVIRLVENPNQSG---------GVSTQSHGRRNVLVYLPTGEAVSSYSSL 60

Query: 61  EQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRQFFQV 120
           EQ L  LGW RY +  + +L+Q+H+   S  LISLP+ F+KF  ++MYDIVVKN   F V
Sbjct: 61  EQILRSLGWERYFS-GDSDLIQYHK-RSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHV 110

Query: 121 RD 123
           RD
Sbjct: 121 RD 110

The following BLAST results are available for this feature:

BLAST of CcUC02G037610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570697.1	2.1e-61	91.47	Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022148408.1	6.2e-53	83.97	flowering-promoting factor 1-like [Momordica charantia]	[more]
KAG6760852.1	3.4e-51	78.57	hypothetical protein POTOM_034035 [Populus tomentosa]	[more]
EOY34019.1	3.4e-51	79.67	FPF1-like protein 1 [Theobroma cacao]	[more]
XP_017982496.1	3.4e-51	79.67	PREDICTED: flowering-promoting factor 1 [Theobroma cacao]	[more]

BLAST of CcUC02G037610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24340	1.4e-23	50.00	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]
O23624	1.8e-23	48.36	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
Q5Q0B3	1.2e-22	47.58	Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q0E1D7	1.5e-22	49.59	Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q8LR63	2.5e-20	45.31	Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of CcUC02G037610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE84	1.6e-62	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190350 PE=3 SV=1	[more]
A0A6J1D405	3.0e-53	83.97	flowering-promoting factor 1-like OS=Momordica charantia OX=3673 GN=LOC111017063...	[more]
A0A061H020	1.6e-51	79.67	FPF1-like protein 1 OS=Theobroma cacao OX=3641 GN=TCM_041825 PE=3 SV=1	[more]
A0A1R3HBS3	1.4e-50	78.23	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20321 PE=3 ...	[more]
A0A4U5QFB7	1.4e-50	77.78	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000093850 PE=3 SV=1	[more]

BLAST of CcUC02G037610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24860.1	1.3e-24	48.36	flowering promoting factor 1	[more]
AT4G31380.1	8.4e-24	47.58	FPF1-like protein 1	[more]
AT5G10625.1	7.1e-23	47.54	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF11	FLOWERING-PROMOTING FACTOR 1-LIKE	coord: 1..123
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G037610.1	CcUC02G037610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity