CcUC02G036900 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G036900
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	pentatricopeptide repeat-containing protein At2g30100, chloroplastic
Location	CicolChr02: 32631046 .. 32634421 (-)
RNA-Seq Expression	CcUC02G036900
Synteny	CcUC02G036900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTGCCATTGCAACCACTCACTCCGACTTCCACCGTCACCATCGCTCAATCCTCCGCCAGAAGATTAGGGTTTCTTTCTTTTGTTTCCGATCAACAATTCAATTCAATTCACCGCTTCTTGAAGGGGTTTCTTGCTGCCTCTCTGTACTCTTCTCTCTTTCTCTTCCGTCTTTCATTTGTTTCATTTTCTGTTACATTGTTACTGTTATAACGAGTTCACATTGCGCTCAAAATTGATGCGGTGGAAACCCTAATCTTCATTTCTTGTTTTACTTCATTCGGTTTTGAACTTTTCTCAACTCGTTCGAGATATCGTAACGCTTAAGTTCGCAGGTTATTCGAAATTTTAGTTTGAATTTAGTGATTTGGATTAGAATTACGAAATGATTTGTGCCCAGGGCTTTACCCCGTTAACCCAATTTGGGTTTTCATGTTCTTTATCTTCTGCACTGAAAACTGAGAGGCATGGGTTTTCTACTCCCCAATTGTATAGTCCTTCGCCGGTAAAGTTTTGCTTTGTGGTTTCTCGTATTTCTTGCAACTACCAGGATTCTACTTTCTCTGTTCCGCGAGCTAGTAAGTTTCGGGACTTAAGGTTGTTCAAATCGGTTGAGTTGGACCAGTTCATCACGAGTGATGACGAAGATGAAATGGGAGATGGGTTTTTTGAGGCAATTGAGGAATTGGAACGAATGACGAGGGAACCATCGGATGTTCTTGAAGAAATGAACGATCGCCTTTCGGCGAGGGAATTTCAGCTCGTGTTGGTGTACTTCTCCCAAGAAGGGAGAGATTCATGGTGTGCTCTTGAGGTTTTTGAGTGGCTCCAAAAGGAAAATCGGGTTGACAAGGAGACCATGGAGTTGATGGTGTCTATAATGTGTGGTTGGATCAAGAAGTTGGTCGAGGGACGACATAACGTCGGTGATGTTGTTGACCTTCTTGTGGATATGGATTGTGTAGGTTTGAAGCCCCATTTTAGCATGATAGAAAAGGTTATCTCTATGTACTGGGAAATGGGTGAGAAAGAAAAAGCAATTTCGTTCGTGAAAGAGGTCTTGGGACGCAAGCTTTCTTTTATTAAGGACGATTGGGAGGGACATAAAGGGGGCCCAAGCGGTTATCTCGCATGGAAGATGATGGTAAGCCTTCAGCTAATCAGGTTTTTCGTATCTTTAACCATTAACTTGCTTAAGAGTCAACAATGGTATTCTTTTGCTCTGTCTATCTATTACATTGAAACCTCGTATGAAATGCAAATGTCTTCAAGCATTGTTTACTAGATTTGAATGTCATATTTTGAATCCTGAAATTGGTTAGTCTCTCTACCTTCTTTATTTTACTCCTCTAGTTAATCATTTAGGTTAGTCTCTCGATCTTGTTAGATTTTGTTATTTGACCATAAGGTTTTTGTTGTGACGACTTTGGTCGATGTTGTAAAGGATATTTTTTTGTCATTGTGTTTGTTTAATTGTAATTGAGGGGGTTCTGGAAGAACTGTGTAGGTTTTTATCAGAGAGCTAGATGAGCGTTCAGCACACTATGGTTTGGTAGTACTTTTGGGATATATGGTTAAGCTAGGTTTTTATGTGGTTAGGCATGTTTGAATCTGTTGTTATGTTGGTGTTCGACATACTGAAGTTTATTCTACAGATGTTGGATTTAACAAAACCATGAATATCTTAGGGTTTTTTCACTAGAACTTTGTTGTTGTCATTAGTATCATTCATTGAAAACTTTTGGGCTTATCTTTATTCATTGTCAATTTCTTTGGAGCTTACTCTTCCATTAGTGAAAGTATACATCTTTCTGGTCTCTTCCAATTGTTATGTTTGTTCAGCATGACCCCAAGTGAAAATTCAATTGCTAATGGTCTCAAAAACCAATTTTCTTAGGTTGATGATGACTATAGGGGCGCAGTGAAAATGGTGCTACATCTTAGAGAATCTGGATTAAAGCCAGAGGTTTACTGCTATCTTATTGCCATGACTGCTGTGGTTAAAGAGCTGAATGAATTTGCAAAAGCTCTACGGAAACTCAAAAGTTATGCAAGAGACGGGATAGTGGCTGAACTCGATAAAAACAATGTTGAACTTGTTGAGAAGTATCAGACAGAGCTTCTAGCTGATGGAGTACGGTTATCCAACTGGGTGCTTGAAGAGGGAAACTTTTCAATTCATGGGGTGGTTCATGAGAGACTCCTTGCTATGTACATTTGTGCTGGGCAAGGACTCGAGGCAGAGAGACAGCTTTGGGAAATGAAGCTTGTAGGCAAGGAGGCCGATGCTGATCTGTACGATATTGTGCTAGCCATTTGTGCTTCACAGAAGGAGACAAAAGCAATGAAACGGTTGCTTACCAGGATTGAGATTACGAGTCCCATGCGTAAGAAGAAGAGTTTGACATGGCTACTAAGGGGTTACATAAAAGGAGGGCATTTCCGTGATGCTGCAGAAACGTTAGTAAAAATGGTAAATTTGGGTTTTCTCCCGGAGTACTTGGACAGAGTAGCTGTGATGCAAGGACTAAGAAGAAAAATTCGGGAACCTGAAAATGTCGATACTTATCTCGATCTCTGCAAGTGTCTCTCCAATGCAAATCTAATTGGACCTAGTCTTGTATATTTACATTTACAGAAACACAAGCTTTGGGTCATCAAAATGCTTTGAAGAAGCTCCTCAATACCTACATCTCTGCACAGGCAGCTAATAAAATGGAGCAAAAACCATATTCATATTATACAGCACCAGCTCTTTTTTTGGTGCTTTTGTATAGTTTGAGGGATATGCTTTTTCAGGCAGGTGAAGGTGACTCTTGAAGCTCTTTAAGCTGACCCTGAAGTGGAATACTTGTGTATATATATATATATAACTCTTTAGCTACTGTGCACAGAGAACCAATGTTTCAATGTATAGATTGTATAAGGAAATTACATATTCTGATATTTTTAGTGTACAGGCTTTGGTTTCTTCAGTGTTTTCACGTGTGAAGAATCAATCTGGTTTTGCTCTGTGAATCAAATGGAAAGACAATCAAAGTTTGTGAACTGTTGGTCGTGAAAGATGTGGCCATATTTTGCTTCTTCTTGCCCAGAAAACAACACGTGGTGTGTCCATTGATTGAACATCCAGGTTTTACACTATTGCATTATTACATTATTCTGTTGCTTTCACCTCAACAATTTATTGTCTGTATGATTCATACAAGATGTCTTTTACTCTTTTCTTATTATGGCCAGTAAAATGAAAAATCTGTTTGGAACAAGCGTATGTTTTCATATTGGGGAGGTGTAATGTAATTGTGTCGGTTGGGTCCGCACATATGTCTTTGAATTTATCTATTCAACATTTTAAAAATCGAAATTGAAAGTTCCGG

mRNA sequence

CGCTGCCATTGCAACCACTCACTCCGACTTCCACCGTCACCATCGCTCAATCCTCCGCCAGAAGATTAGGGTTTCTTTCTTTTGTTTCCGATCAACAATTCAATTCAATTCACCGCTTCTTGAAGGGGTTTCTTGCTGCCTCTCTGTACTCTTCTCTCTTTCTCTTCCGTCTTTCATTTGTTTCATTTTCTGTTACATTGTTACTGTTATAACGAGTTCACATTGCGCTCAAAATTGATGCGGTGGAAACCCTAATCTTCATTTCTTGTTTTACTTCATTCGGTTTTGAACTTTTCTCAACTCGTTCGAGATATCGTAACGCTTAAGTTCGCAGGTTATTCGAAATTTTAGTTTGAATTTAGTGATTTGGATTAGAATTACGAAATGATTTGTGCCCAGGGCTTTACCCCGTTAACCCAATTTGGGTTTTCATGTTCTTTATCTTCTGCACTGAAAACTGAGAGGCATGGGTTTTCTACTCCCCAATTGTATAGTCCTTCGCCGGTAAAGTTTTGCTTTGTGGTTTCTCGTATTTCTTGCAACTACCAGGATTCTACTTTCTCTGTTCCGCGAGCTAGTAAGTTTCGGGACTTAAGGTTGTTCAAATCGGTTGAGTTGGACCAGTTCATCACGAGTGATGACGAAGATGAAATGGGAGATGGGTTTTTTGAGGCAATTGAGGAATTGGAACGAATGACGAGGGAACCATCGGATGTTCTTGAAGAAATGAACGATCGCCTTTCGGCGAGGGAATTTCAGCTCGTGTTGGTGTACTTCTCCCAAGAAGGGAGAGATTCATGGTGTGCTCTTGAGGTTTTTGAGTGGCTCCAAAAGGAAAATCGGGTTGACAAGGAGACCATGGAGTTGATGGTGTCTATAATGTGTGGTTGGATCAAGAAGTTGGTCGAGGGACGACATAACGTCGGTGATGTTGTTGACCTTCTTGTGGATATGGATTGTGTAGGTTTGAAGCCCCATTTTAGCATGATAGAAAAGGTTATCTCTATGTACTGGGAAATGGGTGAGAAAGAAAAAGCAATTTCGTTCGTGAAAGAGGTCTTGGGACGCAAGCTTTCTTTTATTAAGGACGATTGGGAGGGACATAAAGGGGGCCCAAGCGGTTATCTCGCATGGAAGATGATGGTTGATGATGACTATAGGGGCGCAGTGAAAATGGTGCTACATCTTAGAGAATCTGGATTAAAGCCAGAGGTTTACTGCTATCTTATTGCCATGACTGCTGTGGTTAAAGAGCTGAATGAATTTGCAAAAGCTCTACGGAAACTCAAAAGTTATGCAAGAGACGGGATAGTGGCTGAACTCGATAAAAACAATGTTGAACTTGTTGAGAAGTATCAGACAGAGCTTCTAGCTGATGGAGTACGGTTATCCAACTGGGTGCTTGAAGAGGGAAACTTTTCAATTCATGGGGTGGTTCATGAGAGACTCCTTGCTATGTACATTTGTGCTGGGCAAGGACTCGAGGCAGAGAGACAGCTTTGGGAAATGAAGCTTGTAGGCAAGGAGGCCGATGCTGATCTGTACGATATTGTGCTAGCCATTTGTGCTTCACAGAAGGAGACAAAAGCAATGAAACGGTTGCTTACCAGGATTGAGATTACGAGTCCCATGCGTAAGAAGAAGAGTTTGACATGGCTACTAAGGGGTTACATAAAAGGAGGGCATTTCCGTGATGCTGCAGAAACGTTAGTAAAAATGGTAAATTTGGGTTTTCTCCCGGAGTACTTGGACAGAGTAGCTGTGATGCAAGGACTAAGAAGAAAAATTCGGGAACCTGAAAATGTCGATACTTATCTCGATCTCTGCAAGTGTCTCTCCAATGCAAATCTAATTGGACCTAGTCTTGTATATTTACATTTACAGAAACACAAGCTTTGGGTCATCAAAATGCTTTGAAGAAGCTCCTCAATACCTACATCTCTGCACAGGCAGCTAATAAAATGGAGCAAAAACCATATTCATATTATACAGCACCAGCTCTTTTTTTGGTGCTTTTGTATAGTTTGAGGGATATGCTTTTTCAGGCAGGTGAAGGTGACTCTTGAAGCTCTTTAAGCTGACCCTGAAGTGGAATACTTGTGTATATATATATATATAACTCTTTAGCTACTGTGCACAGAGAACCAATGTTTCAATGTATAGATTGTATAAGGAAATTACATATTCTGATATTTTTAGTGTACAGGCTTTGGTTTCTTCAGTGTTTTCACGTGTGAAGAATCAATCTGGTTTTGCTCTGTGAATCAAATGGAAAGACAATCAAAGTTTGTGAACTGTTGGTCGTGAAAGATGTGGCCATATTTTGCTTCTTCTTGCCCAGAAAACAACACGTGGTGTGTCCATTGATTGAACATCCAGGTTTTACACTATTGCATTATTACATTATTCTGTTGCTTTCACCTCAACAATTTATTGTCTGTATGATTCATACAAGATGTCTTTTACTCTTTTCTTATTATGGCCAGTAAAATGAAAAATCTGTTTGGAACAAGCGTATGTTTTCATATTGGGGAGGTGTAATGTAATTGTGTCGGTTGGGTCCGCACATATGTCTTTGAATTTATCTATTCAACATTTTAAAAATCGAAATTGAAAGTTCCGG

Coding sequence (CDS)

ATGATTTGTGCCCAGGGCTTTACCCCGTTAACCCAATTTGGGTTTTCATGTTCTTTATCTTCTGCACTGAAAACTGAGAGGCATGGGTTTTCTACTCCCCAATTGTATAGTCCTTCGCCGGTAAAGTTTTGCTTTGTGGTTTCTCGTATTTCTTGCAACTACCAGGATTCTACTTTCTCTGTTCCGCGAGCTAGTAAGTTTCGGGACTTAAGGTTGTTCAAATCGGTTGAGTTGGACCAGTTCATCACGAGTGATGACGAAGATGAAATGGGAGATGGGTTTTTTGAGGCAATTGAGGAATTGGAACGAATGACGAGGGAACCATCGGATGTTCTTGAAGAAATGAACGATCGCCTTTCGGCGAGGGAATTTCAGCTCGTGTTGGTGTACTTCTCCCAAGAAGGGAGAGATTCATGGTGTGCTCTTGAGGTTTTTGAGTGGCTCCAAAAGGAAAATCGGGTTGACAAGGAGACCATGGAGTTGATGGTGTCTATAATGTGTGGTTGGATCAAGAAGTTGGTCGAGGGACGACATAACGTCGGTGATGTTGTTGACCTTCTTGTGGATATGGATTGTGTAGGTTTGAAGCCCCATTTTAGCATGATAGAAAAGGTTATCTCTATGTACTGGGAAATGGGTGAGAAAGAAAAAGCAATTTCGTTCGTGAAAGAGGTCTTGGGACGCAAGCTTTCTTTTATTAAGGACGATTGGGAGGGACATAAAGGGGGCCCAAGCGGTTATCTCGCATGGAAGATGATGGTTGATGATGACTATAGGGGCGCAGTGAAAATGGTGCTACATCTTAGAGAATCTGGATTAAAGCCAGAGGTTTACTGCTATCTTATTGCCATGACTGCTGTGGTTAAAGAGCTGAATGAATTTGCAAAAGCTCTACGGAAACTCAAAAGTTATGCAAGAGACGGGATAGTGGCTGAACTCGATAAAAACAATGTTGAACTTGTTGAGAAGTATCAGACAGAGCTTCTAGCTGATGGAGTACGGTTATCCAACTGGGTGCTTGAAGAGGGAAACTTTTCAATTCATGGGGTGGTTCATGAGAGACTCCTTGCTATGTACATTTGTGCTGGGCAAGGACTCGAGGCAGAGAGACAGCTTTGGGAAATGAAGCTTGTAGGCAAGGAGGCCGATGCTGATCTGTACGATATTGTGCTAGCCATTTGTGCTTCACAGAAGGAGACAAAAGCAATGAAACGGTTGCTTACCAGGATTGAGATTACGAGTCCCATGCGTAAGAAGAAGAGTTTGACATGGCTACTAAGGGGTTACATAAAAGGAGGGCATTTCCGTGATGCTGCAGAAACGTTAGTAAAAATGGTAAATTTGGGTTTTCTCCCGGAGTACTTGGACAGAGTAGCTGTGATGCAAGGACTAAGAAGAAAAATTCGGGAACCTGAAAATGTCGATACTTATCTCGATCTCTGCAAGTGTCTCTCCAATGCAAATCTAATTGGACCTAGTCTTGTATATTTACATTTACAGAAACACAAGCTTTGGGTCATCAAAATGCTTTGA

Protein sequence

MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFSVPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGHKGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRKLKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYICAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKKSLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDLCKCLSNANLIGPSLVYLHLQKHKLWVIKML

Homology

[Close]

BLAST of CcUC02G036900 vs. NCBI nr
Match: XP_038901728.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Benincasa hispida])

HSP 1 Score: 989.9 bits (2558), Expect = 7.9e-285
Identity = 487/510 (95.49%), Postives = 502/510 (98.43%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           M+CAQGFTPLTQFGFS SLSSALKT+RHGFSTPQLYSP PVKFCF+VSRISCNYQDSTFS
Sbjct: 1   MVCAQGFTPLTQFGFSFSLSSALKTDRHGFSTPQLYSPPPVKFCFMVSRISCNYQDSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YWEMGEKEKAISFVKEVLGR L+F+KDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAISFVKEVLGRNLAFMKDDWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEG+FSIHGVVHERLLAMYI
Sbjct: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGSFSIHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHF DAAETLVKM++LGFLPEYLDRVAV+QGLR++IREPENVDTYLDL
Sbjct: 421 SLTWLLRGYIKGGHFHDAAETLVKMIDLGFLPEYLDRVAVLQGLRKQIREPENVDTYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQKHKLWV+KML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWVVKML 510

[Close]

BLAST of CcUC02G036900 vs. NCBI nr
Match: KAG7010495.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 942.2 bits (2434), Expect = 1.9e-270
Identity = 466/510 (91.37%), Postives = 492/510 (96.47%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGF+PLTQFGFS SLSS LK+ER GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAQGFSPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG  S HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLLTRIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. NCBI nr
Match: XP_023512972.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 940.6 bits (2430), Expect = 5.5e-270
Identity = 466/510 (91.37%), Postives = 491/510 (96.27%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGFTPLTQFGFS SLSS LK+ER GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG  S H VVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHRVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLLTRIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. NCBI nr
Match: XP_022944005.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita moschata])

HSP 1 Score: 940.6 bits (2430), Expect = 5.5e-270
Identity = 466/510 (91.37%), Postives = 491/510 (96.27%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGFTPLTQFGFS SLSS LK+ER GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
            DVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 RDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG  S HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLLTRIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. NCBI nr
Match: KAG6570645.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 940.3 bits (2429), Expect = 7.1e-270
Identity = 465/510 (91.18%), Postives = 491/510 (96.27%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGF+PLTQFGFS SLSS LK+ER GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAQGFSPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERM R+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMARDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG  S HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLLTRIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. ExPASy Swiss-Prot
Match: Q0WNN7 (Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g30100 PE=2 SV=2)

HSP 1 Score: 608.2 bits (1567), Expect = 8.4e-173
Identity = 305/474 (64.35%), Postives = 376/474 (79.32%), Query Frame = 0


Query: 48  SRISCNYQDSTFSVPRASKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELER 107
           SRI CN + +      A KFR++ L +SVELDQFITS++E    +E+G+GFFEAIEELER
Sbjct: 34  SRIICNLKLNY----SAGKFREMGLSRSVELDQFITSEEEEGEAEEIGEGFFEAIEELER 93

Query: 108 MTREPSDVLEEMNDRLSAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMV 167
           MTREPSD+LEEMN RLS+RE QL+LVYF+QEGRDSWC LEVFEWL+KENRVD+E MELMV
Sbjct: 94  MTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVFEWLKKENRVDEEIMELMV 153

Query: 168 SIMCGWIKKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVK 227
           SIMCGW+KKL+E   N   V DLL++MDCVGLKP FSM++KVI++Y EMG+KE A+ FVK
Sbjct: 154 SIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKVIALYCEMGKKESAVLFVK 213

Query: 228 EVLGRKLSFIKD-----DWEGHKGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVY 287
           EVL R+  F          EG KGGP GYLAWK MVD DYR AV MV+ LR SGLKPE Y
Sbjct: 214 EVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRKAVDMVMELRLSGLKPEAY 273

Query: 288 CYLIAMTAVVKELNEFAKALRKLKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNW 347
            YLIAMTA+VKELN   K LR+LK +AR G VAE+D ++  L+EKYQ+E L+ G++L+ W
Sbjct: 274 SYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVLIEKYQSETLSRGLQLATW 333

Query: 348 VLEEG--NFSIHGVVHERLLAMYICAGQGLEAERQLWEMKLVGKEADADLYDIVLAICAS 407
            +EEG  N SI GVVHERLLAMYICAG+G EAE+QLW+MKL G+E +ADL+DIV+AICAS
Sbjct: 334 AVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAGREPEADLHDIVMAICAS 393

Query: 408 QKETKAMKRLLTRIEITSPMRKKKSLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLD 467
           QKE  A+ RLLTR+E     RKKK+L+WLLRGY+KGGHF +AAETLV M++ G  PEY+D
Sbjct: 394 QKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEAAETLVSMIDSGLHPEYID 453

Query: 468 RVAVMQGLRRKIREPENVDTYLDLCKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           RVAVMQG+ RKI+ P +V+ Y+ LCK L +A L+GP LVY+++ K+KLW++KM+
Sbjct: 454 RVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503

[Close]

BLAST of CcUC02G036900 vs. ExPASy Swiss-Prot
Match: Q0WVV0 (Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g10910 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-06
Identity = 47/215 (21.86%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 262 VKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRKLKSYARDGIVAELDKNNVELV 321
           +K+   ++  GLKP+V  Y   +   +K  N + KA+          ++ EL  N +++ 
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE---------LIGELPHNGIQM- 245

Query: 322 EKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYICAGQGLEAERQLWEMKLVGKE 381
                                       V++  +LA+    G+  EAE  + +MK+ G  
Sbjct: 246 --------------------------DSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 305

Query: 382 ADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKKSLTWLLRGYIKGGHFRDAAET 441
            +   Y  +L   + + + K    L+T ++    +  K  +T LL+ YIKGG F  + E 
Sbjct: 306 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 364

Query: 442 LVKMVNLGFLPEYLDRVAVMQGLRR--KIREPENV 475
           L ++ + G+    +    +M GL +  K+ E  ++
Sbjct: 366 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364

[Close]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL
Match: A0A6J1FYE9 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448564 PE=4 SV=1)

HSP 1 Score: 940.6 bits (2430), Expect = 2.6e-270
Identity = 466/510 (91.37%), Postives = 491/510 (96.27%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGFTPLTQFGFS SLSS LK+ER GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
            DVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 RDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYCYLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG  S HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLLTRIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL
Match: A0A6J1JH85 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484464 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 5.0e-269
Identity = 462/510 (90.59%), Postives = 492/510 (96.47%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICA GFTPLT+FGFS SLSS LK++R GFS PQL S SPV FCF+VSRI+CN+Q+STFS
Sbjct: 1   MICAPGFTPLTKFGFSFSLSSGLKSKRLGFSAPQLCSRSPVNFCFIVSRITCNHQNSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVLEEMNDRLS
Sbjct: 61  VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG+HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YW+MGEKEKAISFVKEVLGRKL F+KD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVL+LRESGLKPEVYC+LIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCFLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG+VAELDK+NVELV++YQ+ELLADGVRLSNWVL+EG+ S HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGSSSSHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKET+AM RLL+RIEITSP  KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLSRIEITSPRLKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAV+QGLR++IREPENV+TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQK+KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510

[Close]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL
Match: A0A1S3CNE0 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502924 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 5.7e-265
Identity = 462/510 (90.59%), Postives = 480/510 (94.12%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGFTPLTQFGFS SLSS L+T+R+GFSTP+LY  SP         ISCNYQDSTFS
Sbjct: 1   MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSP---------ISCNYQDSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA+KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS
Sbjct: 61  VSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           ARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WI KLVEGRHNV
Sbjct: 121 AREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YWEMGEKEKAI FVKEVLGR L+F+KDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVLHLRESGL+PEVY YLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LKSYARDG VAELDKNNVELV KYQTELLADGVRLSNWVLEEG+ SIHGVVHERLLAMYI
Sbjct: 301 LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQG+EAERQLWEMKL+GKEADADLYDIVLAICASQKE KAMKRLLTRIEITSPM KKK
Sbjct: 361 CAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAA T+VKM+NLGFLPEYLDRVAV+QGLR+ IREPE V TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAGTVVKMINLGFLPEYLDRVAVLQGLRKGIREPEIVHTYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQKHKLW+IKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWIIKML 501

[Close]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL
Match: A0A0A0KC35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G182120 PE=4 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 7.5e-265
Identity = 461/510 (90.39%), Postives = 481/510 (94.31%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHGFSTPQLYSPSPVKFCFVVSRISCNYQDSTFS 60
           MICAQGFTPLTQFGFS SLSS L+++R GFSTP+LY  SP         ISCNYQDSTFS
Sbjct: 1   MICAQGFTPLTQFGFSFSLSSPLESQRCGFSTPRLYMVSP---------ISCNYQDSTFS 60

Query: 61  VPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
           V RA+KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS
Sbjct: 61  VSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120

Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHNV 180
           ARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEGRHNV
Sbjct: 121 AREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNV 180

Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEGH 240
           GDVVDLLVDMDCVGLKPHFSMIEKVIS+YWEMGEKEKA+ FVKEVLGR L+F+KDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGH 240

Query: 241 KGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
           KGGPSGYLAWKMMVD DYRGAVKMVLHLRESGL+PEVY YLIAMTAVVKELNEFAKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK 300

Query: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYI 360
           LK YARDG VAELDKNNVELV KYQTELLADGV+LSNWVLEEG+ SI GVVHERLLAMYI
Sbjct: 301 LKGYARDGFVAELDKNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYI 360

Query: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
           CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPM KKK
Sbjct: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKK 420

Query: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLDL 480
           SLTWLLRGYIKGGHFRDAA TLVKM+NLGFLPEYLDRVAV+QGLR++IREPE+V TYLDL
Sbjct: 421 SLTWLLRGYIKGGHFRDAAGTLVKMINLGFLPEYLDRVAVLQGLRKEIREPESVHTYLDL 480

Query: 481 CKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           CKCLS+ANLIGPSLVYLHLQKHKLW+IKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWIIKML 501

[Close]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL
Match: A0A6J1D3T2 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017036 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.1e-260
Identity = 453/511 (88.65%), Postives = 482/511 (94.32%), Query Frame = 0


Query: 1   MICAQGFTPLTQFGFSCSLSSALKTERHG-FSTPQLYSPSPVKFCFVVSRISCNYQDSTF 60
           MICAQGFTP+TQFGFS SLSSALKT+R   FSTPQLY  SPV FCF++S I+CN+++STF
Sbjct: 1   MICAQGFTPVTQFGFSFSLSSALKTQRQRFFSTPQLYCHSPVNFCFMISCITCNHRNSTF 60

Query: 61  SVPRASKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRL 120
           SV +A KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRL
Sbjct: 61  SVLKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRL 120

Query: 121 SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCGWIKKLVEGRHN 180
           SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMC WIKKLVEG HN
Sbjct: 121 SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHN 180

Query: 181 VGDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKDDWEG 240
           VGDVVDLLVDMDCVGLKPHFSMIEKVIS+YWEMGEKE+AISFVKEVLGRK++F+KDD EG
Sbjct: 181 VGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEQAISFVKEVLGRKIAFMKDDREG 240

Query: 241 HKGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALR 300
           HKGGPSGYLAWKMMVD DYRGAVK+VLHLRESGL PEVY YLIAMTAVVKELNEFAKALR
Sbjct: 241 HKGGPSGYLAWKMMVDGDYRGAVKLVLHLRESGLNPEVYSYLIAMTAVVKELNEFAKALR 300

Query: 301 KLKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMY 360
           KLKSY RDGIVAELDK+NV LVE YQTELLADGVRLSNWVLEEG+ SIHGV HERLLAMY
Sbjct: 301 KLKSYTRDGIVAELDKDNVGLVEIYQTELLADGVRLSNWVLEEGSSSIHGVAHERLLAMY 360

Query: 361 ICAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKK 420
           ICAG+GLEAERQLWEMKLVGKEAD+DLYDIVLAICASQKET+AM RLLTRIEI SP+ KK
Sbjct: 361 ICAGRGLEAERQLWEMKLVGKEADSDLYDIVLAICASQKETRAMNRLLTRIEIISPLLKK 420

Query: 421 KSLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVMQGLRRKIREPENVDTYLD 480
           KSL+WLLRGYIKGGHF DAAETLVKMV+LGFLPEYLDRVAV+QGLR++IREP +V+TY  
Sbjct: 421 KSLSWLLRGYIKGGHFSDAAETLVKMVDLGFLPEYLDRVAVLQGLRKRIREPGSVETYFK 480

Query: 481 LCKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           LCKCLS+ANLIGP LVYLHLQKHKLWVIKML
Sbjct: 481 LCKCLSDANLIGPGLVYLHLQKHKLWVIKML 511

[Close]

BLAST of CcUC02G036900 vs. TAIR 10
Match: AT2G30100.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 608.2 bits (1567), Expect = 6.0e-174
Identity = 305/474 (64.35%), Postives = 376/474 (79.32%), Query Frame = 0


Query: 48  SRISCNYQDSTFSVPRASKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELER 107
           SRI CN + +      A KFR++ L +SVELDQFITS++E    +E+G+GFFEAIEELER
Sbjct: 34  SRIICNLKLNY----SAGKFREMGLSRSVELDQFITSEEEEGEAEEIGEGFFEAIEELER 93

Query: 108 MTREPSDVLEEMNDRLSAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMV 167
           MTREPSD+LEEMN RLS+RE QL+LVYF+QEGRDSWC LEVFEWL+KENRVD+E MELMV
Sbjct: 94  MTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVFEWLKKENRVDEEIMELMV 153

Query: 168 SIMCGWIKKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVK 227
           SIMCGW+KKL+E   N   V DLL++MDCVGLKP FSM++KVI++Y EMG+KE A+ FVK
Sbjct: 154 SIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKVIALYCEMGKKESAVLFVK 213

Query: 228 EVLGRKLSFIKD-----DWEGHKGGPSGYLAWKMMVDDDYRGAVKMVLHLRESGLKPEVY 287
           EVL R+  F          EG KGGP GYLAWK MVD DYR AV MV+ LR SGLKPE Y
Sbjct: 214 EVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRKAVDMVMELRLSGLKPEAY 273

Query: 288 CYLIAMTAVVKELNEFAKALRKLKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNW 347
            YLIAMTA+VKELN   K LR+LK +AR G VAE+D ++  L+EKYQ+E L+ G++L+ W
Sbjct: 274 SYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVLIEKYQSETLSRGLQLATW 333

Query: 348 VLEEG--NFSIHGVVHERLLAMYICAGQGLEAERQLWEMKLVGKEADADLYDIVLAICAS 407
            +EEG  N SI GVVHERLLAMYICAG+G EAE+QLW+MKL G+E +ADL+DIV+AICAS
Sbjct: 334 AVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAGREPEADLHDIVMAICAS 393

Query: 408 QKETKAMKRLLTRIEITSPMRKKKSLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLD 467
           QKE  A+ RLLTR+E     RKKK+L+WLLRGY+KGGHF +AAETLV M++ G  PEY+D
Sbjct: 394 QKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEAAETLVSMIDSGLHPEYID 453

Query: 468 RVAVMQGLRRKIREPENVDTYLDLCKCLSNANLIGPSLVYLHLQKHKLWVIKML 511
           RVAVMQG+ RKI+ P +V+ Y+ LCK L +A L+GP LVY+++ K+KLW++KM+
Sbjct: 454 RVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503

[Close]

BLAST of CcUC02G036900 vs. TAIR 10
Match: AT1G10910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-07
Identity = 47/215 (21.86%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 262 VKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRKLKSYARDGIVAELDKNNVELV 321
           +K+   ++  GLKP+V  Y   +   +K  N + KA+          ++ EL  N +++ 
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE---------LIGELPHNGIQM- 245

Query: 322 EKYQTELLADGVRLSNWVLEEGNFSIHGVVHERLLAMYICAGQGLEAERQLWEMKLVGKE 381
                                       V++  +LA+    G+  EAE  + +MK+ G  
Sbjct: 246 --------------------------DSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 305

Query: 382 ADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKKSLTWLLRGYIKGGHFRDAAET 441
            +   Y  +L   + + + K    L+T ++    +  K  +T LL+ YIKGG F  + E 
Sbjct: 306 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 364

Query: 442 LVKMVNLGFLPEYLDRVAVMQGLRR--KIREPENV 475
           L ++ + G+    +    +M GL +  K+ E  ++
Sbjct: 366 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364

[Close]

BLAST of CcUC02G036900 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.9e-04
Identity = 35/126 (27.78%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 176 GRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISMYWEMGEKEKAISFVKEVLGRKLSFIKD 235
           GR N  D ++ L +M  VGLKP  +M   +I+ Y + G  E+A++  + +    L     
Sbjct: 563 GRFN--DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK---- 622

Query: 236 DWEGHKGGPSGYLAWKMMVD---DDYRG--AVKMVLHLRESGLKPEVYCYLIAMTAVVKE 295
                   PS  LA   +++   +D R   A  ++ +++E+G+KP+V  Y   M A+++ 
Sbjct: 623 --------PS-LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR- 672

Query: 296 LNEFAK 297
           +++F K
Sbjct: 683 VDKFQK 672

The following BLAST results are available for this feature:

BLAST of CcUC02G036900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901728.1	7.9e-285	95.49	pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Benincasa ...	[more]
KAG7010495.1	1.9e-270	91.37	Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper...	[more]
XP_023512972.1	5.5e-270	91.37	pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita ...	[more]
XP_022944005.1	5.5e-270	91.37	pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita ...	[more]
KAG6570645.1	7.1e-270	91.18	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of CcUC02G036900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WNN7	8.4e-173	64.35	Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidop...	[more]
Q0WVV0	1.6e-06	21.86	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidop...	[more]

BLAST of CcUC02G036900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYE9	2.6e-270	91.37	pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbit...	[more]
A0A6J1JH85	5.0e-269	90.59	pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbit...	[more]
A0A1S3CNE0	5.7e-265	90.59	pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucumis ...	[more]
A0A0A0KC35	7.5e-265	90.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G182120 PE=4 SV=1	[more]
A0A6J1D3T2	1.1e-260	88.65	pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Momordic...	[more]

BLAST of CcUC02G036900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30100.1	6.0e-174	64.35	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G10910.1	1.1e-07	21.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G42310.1	5.9e-04	27.78	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 252..486 e-value: 1.4E-10 score: 43.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 93..231 e-value: 3.8E-6 score: 28.5
None	No IPR available	PANTHER	PTHR47880	OS05G0353300 PROTEIN	coord: 3..510
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 418..452 score: 8.692369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G036900.1	CcUC02G036900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding