CcUC02G036580 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G036580
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CIPKS
Location	CicolChr02: 32373555 .. 32376613 (+)
RNA-Seq Expression	CcUC02G036580
Synteny	CcUC02G036580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGTGAGAAATAGCGGGGAGTGGGAAGAGAAAGAAGAAAGAATATGATTTATTATGAGGCTGGAAATGTTCAATTAGCAAATTAGTCAAAGATTAAGGGGTCCCATGCTAAGCTGTAATGTAATGAATAATCCTTTTATACTAATGGTTTTAAAGATTCCTATACCATTATTGCTAATAATAACTCGACAATCTTCCATTTGAATCATTGTAAGGAAAATTTCTCAAAGTATATCCTCATCATATGCATAAAGGGAATTTGTTTCATCAAAATTGGTATTTTTCTACGGAAAAATAAGTTAATATCTCATTTAGTGAAAGTGTTAAAATCAAAATTGGTATTTTTCTACAGAAAAATAAGTTAATATCTCATTTACTGAAAGTGTCAAAATATTAATGAAAAGATTACATACCACGTCAACATGAGTATAGCACAACTAACATAACTTATACTATCAACCGCAAGGACTAAAGTTGGATCTCTCCATCCTACATATTGTCAACAATAAAAAAATACATACGTACTAAAAAAATTTCTCGATAACCGAAACGTAAGTTGAAAGTAAATGTGGCCACAACCACCAAAACATTGTAGTGCTGTAAAATTATTTGTGAATGACTTGGAAGAATGACATTTGGGGATTGGAGTTACCAAAGAAGTCTCATTCACGCATGATCATTTGCAAACGTGTCTCCTCCTTTTTGCCAAACAAACCAAACCCCTATGCCAAATTGCCAATCTGTCATGACAGCAACTTCAGTTCAAAATCATTTGGACAACAAAGTATATCTTATGATGTATGAAGTTCACAGGTTTCAATTACATGAGAGCAGCTTTTGTTACTCCTGCTTCTGAGCATGTATTATTCATTGAGGCCTTTTTGATCAATCAGGCAGGATTTCAGAGTCTGCTCAGTGACAGGATACAGATTCTATATGTATTAGATTGTTAGGACAGCAAAAAGTTAGACCAATGAAACATATTGACAACAAGATGTGAATAGAGTAAAAGATATAAGTTGATAATAGATCTTGAAATTTTGTTATTACTAGAATGTAGTTTAACGTTAGTAGATGAACAAATGTACAAAGAAGTACGTCAATAGCACAAGTTGGGAGAGTTTGTCATTTCAGATCCTTCAAACCCCGGTTTTGTGAGTTGTGTTCTTTAAGCTGGCTGCTATTGCGGTTGTGATGCACCCTCTTGCTCTGTATAAGGATCTCGAACCCGATCCTGAGGTTGATGAGGCTGAGGCTGAGGATTTTGTTGCTGCTGCTCCTGCTCTCCTCGCCAAACCCATACAATATCCTGTAGAGCTGGCCTTATGTCCTCTTTCAATATTTTCTGATATTCCAATGTGTCTCCGCTTGATTTTTTCATTTCCACCAAATAAAAAGATGGAGTAACCTCAAAGATCTCTGTATCAATGGATAATACCCCCTTTCTTCCTTCTGTTAGTGCCTCAAATTTCAATAGGCCTGCTTCTTTCTTCTGTACTCGAAACCGAAGAAGTTTAGCCATTTCTTCTAGTTTTGAGAGAATAACAGAGGCTGGTTTTCTACAAGTAAACAATGTTTCTTTCTTCTTTGAATTGTCTTCAAATAAACTGGATAAATTGAACCCTGCGGAAAGGGAGATGATATCGAAAGCATTCAAAGTTGGAGGTCTATCTGGCTCTTGATTTCCTTCTGCTGGCACACTTCTCTCGAACAGTCCAGAAACAGCTGCTGCATCTTCAGTCGCTACAGCATTACTTTCTATTCCACTTCTTAGATTCTTAGACCTCAATCCCTTTTTGAACCAAGAACTTTGTCTTATCATTGCTATTGAAGTCCTAGCAATGGGGTCTGGATCAAGCATCCTGCTTAGCAACCGCCGCACTTCACGAGAGAACCAACTAGGGCATTTATACTCTGCTTTTCCAATCTTCCGATACATCTCCATCAAATTCGAATTGTGGAATGGGAGATAACCTGCCAATAGGACAAACAAAACTACTCCACAAGACCAGATATCAGCTTTTGCACCATCATAGCCCTTCCTATTGATGACTTCAGGGGCAACATAAGCTGGTGTACCACAAGTCGTGTGAAGCAACCCGTCTTGACGCTTGGACTCAGCTAAAGCACTTAAACCAAAATCAGACACCTTAAGATTCTCATTTTCATCAAGCAGTAGGTTCTCCGGCTTTATATCACGGTGATACACTCCCCTGCTGTGACAAAAATCAACAGCATTGATTAACTGATAAAAGTATTTCCAAGCAATGTCCTCCTGCAGCCTCCCTTTAGCAACTTTGTCAAAGAGCTCACCACCTTTAGCATATTCCAAAACAAAGTAGATCTTAGTCTTGGTGGCCATAACCTCATATAGACGTAGAATATTAGGATGTCTAACTAGTCTCATAATCGATATTTCACGCTTAATCTGATCGATTAGCGAAGCCTTCGTAATCTTTTCTTTATCAATCACCTTAATGGCCACACTTTGATTGTTTCCTGTATTCCTCGCATAATACACCTTTGCGAAGGTTCCTTGGCCAAGCAATCTCCCTAATTCATATCGTTGAACCATCACACTTGCCTTATTCTCCATCCCAATCTATCAAATCCTTAAATAGAAAAGTACAGAATACAATATCCTAATATCAACTAGATCAACAATGCAGAACTTAGTTAACAAATTGATGCTCAACCATCCTCGGATAAATCAAGCATCGACAAAGTAGGTGTTCGCACTCCACAATAACTTGCAGGTAAATCGAGCGTTTTAAAGCAGAGAGAAGGTGGGGATTCCTGGTTTATGACACTGTTTTCCTCCAATGCAAAACAAGAAAATTCAAGTGCATATGAACAATTATAGATGTTTGAGAAAGAATTGTGAAGGATAGGTGTCATTTTTCGGCATTCCCCGGAAAAACCAGAGATTTGGAGCACCACCTGGTTTCTCTTTAATGGAGATCAACCACCACAGCCCAGCCTTCAGCCCCCTGGCTGCAAAGGGAAATTTGCAACCATTCAAATCAATGAACTCCCAATTCAAACAAGATTATAA

mRNA sequence

ATGTATGGTTTCAATTACATGAGAGCAGCTTTTGTTACTCCTGCTTCTGAGCATCTGGCTGCTATTGCGGTTGTGATGCACCCTCTTGCTCTGTATAAGGATCTCGAACCCGATCCTGAGGTTGATGAGGCTGAGGCTGAGGATTTTGTTGCTGCTGCTCCTGCTCTCCTCGCCAAACCCATACAATATCCTGTAGAGCTGGCCTTATGTCCTCTTTCAATATTTTCTGATATTCCAATTGCCTCAAATTTCAATAGGCCTGCTTCTTTCTTCTGTACTCGAAACCGAAGAAGTTTAGCCATTTCTTCTAGTTTTGAGAGAATAACAGAGGCTGGTTTTCTACAAGTAAACAATGTTTCTTTCTTCTTTGAATTGTCTTCAAATAAACTGGATAAATTGAACCCTGCGGAAAGGGAGATGATATCGAAAGCATTCAAAGTTGGAGGTGTCATTTTTCGGCATTCCCCGGAAAAACCAGAGATTTGGAGCACCACCTGGTTTCTCTTTAATGGAGATCAACCACCACAGCCCAGCCTTCAGCCCCCTGGCTGCAAAGGGAAATTTGCAACCATTCAAATCAATGAACTCCCAATTCAAACAAGATTATAA

Coding sequence (CDS)

ATGTATGGTTTCAATTACATGAGAGCAGCTTTTGTTACTCCTGCTTCTGAGCATCTGGCTGCTATTGCGGTTGTGATGCACCCTCTTGCTCTGTATAAGGATCTCGAACCCGATCCTGAGGTTGATGAGGCTGAGGCTGAGGATTTTGTTGCTGCTGCTCCTGCTCTCCTCGCCAAACCCATACAATATCCTGTAGAGCTGGCCTTATGTCCTCTTTCAATATTTTCTGATATTCCAATTGCCTCAAATTTCAATAGGCCTGCTTCTTTCTTCTGTACTCGAAACCGAAGAAGTTTAGCCATTTCTTCTAGTTTTGAGAGAATAACAGAGGCTGGTTTTCTACAAGTAAACAATGTTTCTTTCTTCTTTGAATTGTCTTCAAATAAACTGGATAAATTGAACCCTGCGGAAAGGGAGATGATATCGAAAGCATTCAAAGTTGGAGGTGTCATTTTTCGGCATTCCCCGGAAAAACCAGAGATTTGGAGCACCACCTGGTTTCTCTTTAATGGAGATCAACCACCACAGCCCAGCCTTCAGCCCCCTGGCTGCAAAGGGAAATTTGCAACCATTCAAATCAATGAACTCCCAATTCAAACAAGATTATAA

Protein sequence

MYGFNYMRAAFVTPASEHLAAIAVVMHPLALYKDLEPDPEVDEAEAEDFVAAAPALLAKPIQYPVELALCPLSIFSDIPIASNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMISKAFKVGGVIFRHSPEKPEIWSTTWFLFNGDQPPQPSLQPPGCKGKFATIQINELPIQTRL

Homology

[Close]

BLAST of CcUC02G036580 vs. NCBI nr
Match: KYP42678.1 (hypothetical protein KK1_035922 [Cajanus cajan])

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-11
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SN N+P SFF T NR  L ISS+FE +TEAGF  VN +SF   +SSNK D+  P E+E+I
Sbjct: 37  SNLNKPPSFFLTLNRSRLQISSNFEIMTEAGFFDVNRISFLRTVSSNKPDRSKPVEKEII 96

Query: 142 SKAFKVGGV 151
           SKAFK+ G+
Sbjct: 97  SKAFKLLGL 105

[Close]

BLAST of CcUC02G036580 vs. NCBI nr
Match: RYR14728.1 (hypothetical protein Ahy_B04g071409 [Arachis hypogaea])

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-10
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNFN+P SFF T NR+ L +SS+ E + EA  L VN  SFF  +SSNK DK  P E+E++
Sbjct: 54  SNFNKPPSFFFTFNRKRLQMSSNLENMVEADLLDVNRTSFFCSVSSNKPDKSKPEEKEIM 113

Query: 142 SKAFKVGG 150
           SKAFK+ G
Sbjct: 114 SKAFKLKG 121

[Close]

BLAST of CcUC02G036580 vs. NCBI nr
Match: GAV58640.1 (hypothetical protein CFOL_v3_02173, partial [Cephalotus follicularis])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNF +P S F   + R  AIS+S E +TEAG L+ N  S F ELSSN  D+ NPAER+MI
Sbjct: 21  SNFKKPPSSFFAFSLRRFAISTSLETMTEAGCLEANLDSLFRELSSNSPDRSNPAERDMI 80

Query: 142 SKAFK 147
           SKAFK
Sbjct: 81  SKAFK 85

[Close]

BLAST of CcUC02G036580 vs. NCBI nr
Match: GAV62481.1 (hypothetical protein CFOL_v3_06004, partial [Cephalotus follicularis])

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-08
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNFN P S F   +RR LA SSSF+ I EA  L V   S F+  S+NK DK NP ER+MI
Sbjct: 39  SNFNTPPSLFFAFSRRCLATSSSFDIIAEAECLDVKLTSSFWSSSANKPDKSNPVERDMI 98

Query: 142 SKAFK 147
           SKAFK
Sbjct: 99  SKAFK 103

[Close]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL
Match: A0A151RJF1 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035922 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SN N+P SFF T NR  L ISS+FE +TEAGF  VN +SF   +SSNK D+  P E+E+I
Sbjct: 37  SNLNKPPSFFLTLNRSRLQISSNFEIMTEAGFFDVNRISFLRTVSSNKPDRSKPVEKEII 96

Query: 142 SKAFKVGGV 151
           SKAFK+ G+
Sbjct: 97  SKAFKLLGL 105

[Close]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL
Match: A0A444ZKQ6 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g071409 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.9e-11
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNFN+P SFF T NR+ L +SS+ E + EA  L VN  SFF  +SSNK DK  P E+E++
Sbjct: 54  SNFNKPPSFFFTFNRKRLQMSSNLENMVEADLLDVNRTSFFCSVSSNKPDKSKPEEKEIM 113

Query: 142 SKAFKVGG 150
           SKAFK+ G
Sbjct: 114 SKAFKLKG 121

[Close]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL
Match: A0A1Q3ASL4 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02173 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-09
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNF +P S F   + R  AIS+S E +TEAG L+ N  S F ELSSN  D+ NPAER+MI
Sbjct: 21  SNFKKPPSSFFAFSLRRFAISTSLETMTEAGCLEANLDSLFRELSSNSPDRSNPAERDMI 80

Query: 142 SKAFK 147
           SKAFK
Sbjct: 81  SKAFK 85

[Close]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL
Match: A0A1Q3B396 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06004 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-08
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 82  SNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAEREMI 141
           SNFN P S F   +RR LA SSSF+ I EA  L V   S F+  S+NK DK NP ER+MI
Sbjct: 39  SNFNTPPSLFFAFSRRCLATSSSFDIIAEAECLDVKLTSSFWSSSANKPDKSNPVERDMI 98

Query: 142 SKAFK 147
           SKAFK
Sbjct: 99  SKAFK 103

[Close]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL
Match: A0A0A9R2D9 (CIPKS OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 80  IASNFNRPASFFCTRNRRSLAISSSFERITEAGFLQVNNVSFFFELSSNKLDKLNPAERE 139
           + +NFN P SFF T + + LA S SF +   A  L+VN  S    LSSNKLD+ NP ERE
Sbjct: 35  VVANFNTPLSFFVTLSFKHLASSFSFAKTAVADCLEVNRASLRPYLSSNKLDRSNPVERE 94

Query: 140 MISKAFK 147
           MIS AFK
Sbjct: 95  MISNAFK 101

The following BLAST results are available for this feature:

BLAST of CcUC02G036580 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP42678.1	2.4e-11	57.97	hypothetical protein KK1_035922 [Cajanus cajan]	[more]
RYR14728.1	2.0e-10	55.88	hypothetical protein Ahy_B04g071409 [Arachis hypogaea]	[more]
GAV58640.1	1.9e-08	58.46	hypothetical protein CFOL_v3_02173, partial [Cephalotus follicularis]	[more]
GAV62481.1	5.6e-08	58.46	hypothetical protein CFOL_v3_06004, partial [Cephalotus follicularis]	[more]

BLAST of CcUC02G036580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G036580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151RJF1	1.2e-11	57.97	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035922 PE=4 SV=1	[more]
A0A444ZKQ6	9.9e-11	55.88	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g071409 PE=4 SV=1	[more]
A0A1Q3ASL4	9.3e-09	58.46	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
A0A1Q3B396	2.7e-08	58.46	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
A0A0A9R2D9	1.3e-07	53.73	CIPKS OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of CcUC02G036580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G036580.1	CcUC02G036580.1	mRNA