CcUC02G036200 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTCTTGTCTCCCCCTATTTCCCATCTCGCATTTGTTCTTGAATCTCCTCAGAGTATTCCCACAGAGACAGATCTCTGAGCCTCAGCCTTTCTCTCAGCTGCACACACACACACACACACAAAGAAAGAGAAAACAAAGACCCAAAGAGATCTCTAGAGAAAAATTATTCAGAATGTTCCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGCGATTCCGGTCTCGTCCTCACCACCGACCCCAAACCCCGCCTCCGTTGGACTGTCGAGCTCCACGAGCGCTTCGTCGACGCCGTCACTCAACTTGGAGGCCCCGATAGTACACACTACCCTTTCTCTATACACATCTACTAATAATTAATTATTTTCCTTCCTCCTCGTCTTAGGGTTTATATATTTTTTATCCCATATTTCCTCCGCAGAAGCCACCCCGAAAACCATCATGAGAGTTATGGGCGTCAAGGGTCTCACTCTCTACCATCTCAAGAGCCACCTCCAGGTATTTCTGATCATCGCGGCTCATCAACTTAAACTTTTCAATTAAGTAAGAATTTGATTCTAACACTATTGTATTACTTGTTAGGTTTTGCCCTAATTTAATTACAGTTTAAAATATATATGTTTACATACTATAATCCATCGAATTAAATTAAACTTTTGAATTTAGTAGTAATTTTAACCTCATTTTCGAGTTTAGAAGTTCAGACTTGGAAAGCAACCCCACAAGGAATTCAATGATCAATCAATAAAGGATGGTATGAGAGGTGAAGATTTTCAACCTAATTTTCTTCTAGTTTCTAACCTTTTCAATCATAATCTTAAAGAACAGAAAAAAAAAATTGCCTTACAAAATATTATTATTTTGTTTGTGATTATGATATTAATTATTGTTGCAGCTTCAGCCTTGGAACTTCAAAGAAACAGTGGATCTTCTTCCAGCTTAATGGACCGTAGTATGAACGAGTATGTCCATCTTATTATTATTTTTTTAATATTCCAAGTTTTTCTTTTCCTTTTTTCAAGGTTGTTTTTTGTAATTTAAAAAGAAAAAATTGGGTTAAGTTATTCTTTTACTTTCTTTTTCACTCTTTATTTATTTATTTTTTTTTCTTTTTTCTTTTTGGTTAGAGAAGGCTGGTGGGGCTTAGAGGGAACACTTTATTTTGTGTGTTTCTTGTACGACAAGTTCTGTCTGATAATTTTAATTTAACACATTTTTCTTAAATTGCTAATTTACCTAAAAATTTAAATTAATAGATAAAGACAAATTTAATATTATATCGTTTAACAATTAGAACAAAACACGGAACAAACAACTGACCTTAATTATACCGAAATAATTAATATATATATTTTTTCTGCTAGAATGCAAATGGAGGTCCAGAGAAGGCTGCATGAACAAATTGAGGTTAGCACATCATTATTTCTCTTCAACAATTTCACTGTTTGGGATTGATTTTTCTTTAAAGTTAGGGCAAAATTAAAATATTGATGTAACTTTTTTTTTTAAAATTTTGAATCTAATCTCGAAGTCAATAGTATATATTTGATGCTAGCCGAGTTTTGCTCATTTTGGTAATATTTAGAGATATTATTAAATCATCTAGTGCTTGGATGGTTAAATTGGTAGGTAGGTTTGTACCTGGGTTGGGTTGGTTGGATTTTTTTTTGGACGAATCCCAAAATTTAAGTTGGTCGGATTGGCAACCCGAAAGACTCAAACAAGGTCATCAACCCAACCCAACCCAAAATTTGAGTTGGGTTAGATTGGGTTCTTGGGTTATTATTTTTTATTATTAATTTAAAGTATTTAAATTTATCTACGACATGTCTAAAAACTAAAATCTCATAAAACTCAAATGTTAAATACCAAATATTCATGATATATATTACAAACTTTAACAAAAGACCAACATTCTTTACACATATATATAATTCAGATTGGGTTTTAGGACAAACTAAGATAAAATTTATTCAACCGAAGACCTACTTCAACCCAACAAAAATTGGAAAAATTTATTCAACCTAATCCTTATAATAGTTAGAGTTGTACGGATTGTTGGGTCATTTAAACACCATTTATTGGTAAGTGCCCAAATAACTTAATGGGAGGTGACTATTGATGTGGAAAAAGAAGAAGAAGAAAAAAAAATTATAGTAATAGCTGATATAAGAATTTAGGTTCATCTATGTTTGATATAAAAAAAAAAAAAGTGTATTATTAAATAATTGAGGTTGAAATAATCATTTTAGTTTTTGCACATTCAAATTTGCTTTATGTTAGTTTATGTGTCTAATTTAAAATATTTAAGTTTAGCTTCTATATTTTCATTAAACTTTAAGAATATCCTTTACTTTTGGTTCGTTAATTATTTTATTTTAAAAAAAGTCAAGCTTAGTTCTTATAAATTTGGAAAATATATCCACATTATTTTTTTAATAAAAATTATTATAAGCAACGTAATTATTTTAAATGGCAAAACTACTTGAAATATTTATAAATATAGCAAAATGTCACTATTTTTCAGTGATAGACAACGATAGATGCTGATAGACATCTATCAGTGTCTATCACTAATAGACAGTGATAGATGATAGCAGTCTATCAATGATAGACATGATATTTTGCTATATTGGTAAATATTTTGGCTCATTTTGCTATATTTAAAAACACACTTTATGATTATTTAACTAATGTCTATAAACTTCAATTGACTAATTTAAAGAGTTCTATAAATACATAGATTAAATTTGGATATTTGAAAATATAACAATGAAAAATGCTTGGTTGTGCCTATTAATCCCTATCCTTATATTTTGTTAAAAAGAATATATAAAAACTTAAATAGAATGAAATCTAAAGTATATAGTGGCTCAAAATGTTATTTTAACCAAATAAATCCATCCAACATTGAAAACTTTATAGTTAATTCGATTTTTTTTTTCTTAACAATATTACATCACATATACAAGATTAGGATAAATCTTTTACATGAATAGAAATGTCTTAAACTATATTAGGGCAAATTTATCATAGGCTCGGAGGGACTCGGGCCCCTCTCAACTTCAATGTGCTTTATATTATTATAAAACAGAGCATTTTAGTTATCAAAATGCCTATTTAGCAAGTAGTAGGATGCTTCAACCTCCTTTTAGTAAACTCAGGTACGAATCCCCTTTTGTATTAAATATGAAATTAAAAGTGTAAATACCTATTAGAAATTTTCAAATTTCAATAATCTATAAGACCTAAACTCAGGTACGAATCCCCTTTTGTATTAAATATGAAATTAAAAGTGTAAATACCTATTAGAAATTTTCAAATTTCAATAATCTATAAGACACAAAATTAAAAAGTAATGAACTAAATTTTTAATTTAAACCATTATCTAGATAGGCTAATAAAGTATATATATTGTGCAGCAAATTCAACATCTTTGTGGTCGAAGAATTGGGTGTGACATTTAAATAAAATCATGGAATTAATTATTAATTTATAGGTACAAAGACACCTTCAATTGAGAATTGAGGCTCAAGGCAAGTACATGCAAAGCATATTAGAGAAAGCTTGCCAAACCCTTGCCGGTGAAAACATGGCCGCCGCCAGCGCCGCCGCTGGCCCTTTCAAAACCACTTCCAACAATATGGGAACAACCACCAATCTTGTCTCAGAGGCTGCCATCAAAGACTTCATTTCACCTCCTCCACCTCACCACACCTTCCCTCCTTTTCAAGACATGAACAACCTATTTAACTCCGAACAGCCTCCGCCTCCACCGCCTCTCATCGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCAGGCGCAGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGGCTCCAAGACTTAGGAACCCCTTCAGCCACCTTAGCACCGCCACCTCCTTCCATTGGCGGCCCAGCCGAATTGGATCCCTTACAATTGGAAATGTATGAATCCAAACCACCACCGCCACCACCACTGCTCGCTGTTGGCAACAACGCAATGAATGAGAAGAAGTTTGACATGACGTTAAAGCTCGAGAAGTCGTCCCCACCGCGGTCGGGGCATTCCGACGAAAGGGTGAATAATAATGGTATGCCTAATAATAGCAACCCTACAATGTCACAGCCACAGGGAAGAAATTCATCATTTGGTTAATTAATTGATGTTATATGTGTAATAATTAGTGACTATAATTTGAATGTAATTAATTAAATGTAGATTAGGGGTTAGATCCTAACAAATGCTTATACTGACTATCGTGTTTGGAAGGAAAAG TATTCTTGTCTCCCCCTATTTCCCATCTCGCATTTGTTCTTGAATCTCCTCAGAGTATTCCCACAGAGACAGATCTCTGAGCCTCAGCCTTTCTCTCAGCTGCACACACACACACACACACAAAGAAAGAGAAAACAAAGACCCAAAGAGATCTCTAGAGAAAAATTATTCAGAATGTTCCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGCGATTCCGGTCTCGTCCTCACCACCGACCCCAAACCCCGCCTCCGTTGGACTGTCGAGCTCCACGAGCGCTTCGTCGACGCCGTCACTCAACTTGGAGGCCCCGATAAAGCCACCCCGAAAACCATCATGAGAGTTATGGGCGTCAAGGGTCTCACTCTCTACCATCTCAAGAGCCACCTCCAGAAGTTCAGACTTGGAAAGCAACCCCACAAGGAATTCAATGATCAATCAATAAAGGATGGTATGAGAGCTTCAGCCTTGGAACTTCAAAGAAACAGTGGATCTTCTTCCAGCTTAATGGACCGTAGTATGAACGAAATGCAAATGGAGGTCCAGAGAAGGCTGCATGAACAAATTGAGGTACAAAGACACCTTCAATTGAGAATTGAGGCTCAAGGCAAGTACATGCAAAGCATATTAGAGAAAGCTTGCCAAACCCTTGCCGGTGAAAACATGGCCGCCGCCAGCGCCGCCGCTGGCCCTTTCAAAACCACTTCCAACAATATGGGAACAACCACCAATCTTGTCTCAGAGGCTGCCATCAAAGACTTCATTTCACCTCCTCCACCTCACCACACCTTCCCTCCTTTTCAAGACATGAACAACCTATTTAACTCCGAACAGCCTCCGCCTCCACCGCCTCTCATCGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCAGGCGCAGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGGCTCCAAGACTTAGGAACCCCTTCAGCCACCTTAGCACCGCCACCTCCTTCCATTGGCGGCCCAGCCGAATTGGATCCCTTACAATTGGAAATGTATGAATCCAAACCACCACCGCCACCACCACTGCTCGCTGTTGGCAACAACGCAATGAATGAGAAGAAGTTTGACATGACGTTAAAGCTCGAGAAGTCGTCCCCACCGCGGTCGGGGCATTCCGACGAAAGGGTGAATAATAATGGTATGCCTAATAATAGCAACCCTACAATGTCACAGCCACAGGGAAGAAATTCATCATTTGGTTAATTAATTGATGTTATATGTGTAATAATTAGTGACTATAATTTGAATGTAATTAATTAAATGTAGATTAGGGGTTAGATCCTAACAAATGCTTATACTGACTATCGTGTTTGGAAGGAAAAG ATGTTCCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGCGATTCCGGTCTCGTCCTCACCACCGACCCCAAACCCCGCCTCCGTTGGACTGTCGAGCTCCACGAGCGCTTCGTCGACGCCGTCACTCAACTTGGAGGCCCCGATAAAGCCACCCCGAAAACCATCATGAGAGTTATGGGCGTCAAGGGTCTCACTCTCTACCATCTCAAGAGCCACCTCCAGAAGTTCAGACTTGGAAAGCAACCCCACAAGGAATTCAATGATCAATCAATAAAGGATGGTATGAGAGCTTCAGCCTTGGAACTTCAAAGAAACAGTGGATCTTCTTCCAGCTTAATGGACCGTAGTATGAACGAAATGCAAATGGAGGTCCAGAGAAGGCTGCATGAACAAATTGAGGTACAAAGACACCTTCAATTGAGAATTGAGGCTCAAGGCAAGTACATGCAAAGCATATTAGAGAAAGCTTGCCAAACCCTTGCCGGTGAAAACATGGCCGCCGCCAGCGCCGCCGCTGGCCCTTTCAAAACCACTTCCAACAATATGGGAACAACCACCAATCTTGTCTCAGAGGCTGCCATCAAAGACTTCATTTCACCTCCTCCACCTCACCACACCTTCCCTCCTTTTCAAGACATGAACAACCTATTTAACTCCGAACAGCCTCCGCCTCCACCGCCTCTCATCGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCAGGCGCAGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGGCTCCAAGACTTAGGAACCCCTTCAGCCACCTTAGCACCGCCACCTCCTTCCATTGGCGGCCCAGCCGAATTGGATCCCTTACAATTGGAAATGTATGAATCCAAACCACCACCGCCACCACCACTGCTCGCTGTTGGCAACAACGCAATGAATGAGAAGAAGTTTGACATGACGTTAAAGCTCGAGAAGTCGTCCCCACCGCGGTCGGGGCATTCCGACGAAAGGGTGAATAATAATGGTATGCCTAATAATAGCAACCCTACAATGTCACAGCCACAGGGAAGAAATTCATCATTTGGTTAA MFHATKKPSSMTSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQSIKDGMRASALELQRNSGSSSSLMDRSMNEMQMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAASAAAGPFKTTSNNMGTTTNLVSEAAIKDFISPPPPHHTFPPFQDMNNLFNSEQPPPPPPLIDCLKKPSPFISGAGKTPIFWPDDLRLQDLGTPSATLAPPPPSIGGPAELDPLQLEMYESKPPPPPPLLAVGNNAMNEKKFDMTLKLEKSSPPRSGHSDERVNNNGMPNNSNPTMSQPQGRNSSFG Homology
BLAST of CcUC02G036200 vs. NCBI nr
Match: XP_038900378.1 (myb family transcription factor IPN2-like [Benincasa hispida]) HSP 1 Score: 691.4 bits (1783), Expect = 4.1e-195 Identity = 349/364 (95.88%), Postives = 356/364 (97.80%), Query Frame = 0
BLAST of CcUC02G036200 vs. NCBI nr
Match: XP_004140019.1 (myb family transcription factor IPN2 [Cucumis sativus] >KAE8646869.1 hypothetical protein Csa_020612 [Cucumis sativus]) HSP 1 Score: 665.2 bits (1715), Expect = 3.2e-187 Identity = 341/366 (93.17%), Postives = 351/366 (95.90%), Query Frame = 0
BLAST of CcUC02G036200 vs. NCBI nr
Match: XP_008456284.1 (PREDICTED: myb family transcription factor APL-like [Cucumis melo] >TYJ95604.1 myb family transcription factor APL-like [Cucumis melo var. makuwa]) HSP 1 Score: 652.5 bits (1682), Expect = 2.1e-183 Identity = 336/367 (91.55%), Postives = 345/367 (94.01%), Query Frame = 0
BLAST of CcUC02G036200 vs. NCBI nr
Match: XP_023511848.1 (myb family transcription factor APL-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178 Identity = 332/367 (90.46%), Postives = 342/367 (93.19%), Query Frame = 0
BLAST of CcUC02G036200 vs. NCBI nr
Match: XP_022985858.1 (myb family transcription factor APL-like [Cucurbita maxima]) HSP 1 Score: 633.6 bits (1633), Expect = 1.0e-177 Identity = 330/367 (89.92%), Postives = 342/367 (93.19%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 9.2e-97 Identity = 222/386 (57.51%), Postives = 261/386 (67.62%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2) HSP 1 Score: 316.6 bits (810), Expect = 3.6e-85 Identity = 168/225 (74.67%), Postives = 187/225 (83.11%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy Swiss-Prot
Match: Q8VYI2 (Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 9.0e-52 Identity = 107/150 (71.33%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.1e-48 Identity = 112/189 (59.26%), Postives = 130/189 (68.78%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.6e-48 Identity = 111/168 (66.07%), Postives = 123/168 (73.21%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy TrEMBL
Match: A0A5D3B9J4 (Myb family transcription factor APL-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00200 PE=3 SV=1) HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183 Identity = 336/367 (91.55%), Postives = 345/367 (94.01%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy TrEMBL
Match: A0A1S3C2G3 (myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103496278 PE=3 SV=1) HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183 Identity = 336/367 (91.55%), Postives = 345/367 (94.01%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy TrEMBL
Match: A0A6J1JEU6 (myb family transcription factor APL-like OS=Cucurbita maxima OX=3661 GN=LOC111483783 PE=3 SV=1) HSP 1 Score: 633.6 bits (1633), Expect = 4.9e-178 Identity = 330/367 (89.92%), Postives = 342/367 (93.19%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy TrEMBL
Match: A0A6J1FU09 (myb family transcription factor APL-like OS=Cucurbita moschata OX=3662 GN=LOC111448435 PE=3 SV=1) HSP 1 Score: 624.4 bits (1609), Expect = 3.0e-175 Identity = 327/368 (88.86%), Postives = 341/368 (92.66%), Query Frame = 0
BLAST of CcUC02G036200 vs. ExPASy TrEMBL
Match: A0A5A7UMD5 (Myb family transcription factor APL-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005380 PE=3 SV=1) HSP 1 Score: 619.8 bits (1597), Expect = 7.4e-174 Identity = 320/350 (91.43%), Postives = 329/350 (94.00%), Query Frame = 0
BLAST of CcUC02G036200 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 316.6 bits (810), Expect = 2.6e-86 Identity = 168/225 (74.67%), Postives = 187/225 (83.11%), Query Frame = 0
BLAST of CcUC02G036200 vs. TAIR 10
Match: AT1G79430.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 206.5 bits (524), Expect = 3.7e-53 Identity = 111/159 (69.81%), Postives = 129/159 (81.13%), Query Frame = 0
BLAST of CcUC02G036200 vs. TAIR 10
Match: AT3G12730.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 205.7 bits (522), Expect = 6.4e-53 Identity = 107/150 (71.33%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of CcUC02G036200 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-49 Identity = 112/189 (59.26%), Postives = 130/189 (68.78%), Query Frame = 0
BLAST of CcUC02G036200 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 193.4 bits (490), Expect = 3.3e-49 Identity = 111/168 (66.07%), Postives = 123/168 (73.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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