CcUC02G035470 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G035470
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
LocationCicolChr02: 31256086 .. 31262067 (-)
RNA-Seq ExpressionCcUC02G035470
SyntenyCcUC02G035470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAATTCTTTTTCGAGATTGGAGTTTTTACAAGAAGTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCTGCAGGGATACAACAACGAATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTATTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCAGATCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCTGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTACTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCCGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATACCTCTACGTGTGATTCGTTGAGACCTAAACTTCTCCCACTTTTTTTTTTTGAGAAAAGGGGTGAAATGAATTGAATAGATATCTTCATTTTTATATTAATTATTTAGATTAATGAACTAAATTAGATAGTTATATGAGTGAAAGAAAACGGCTTATATAAATAAAAATTAGCAGTCAAAATATTGAGTCTCATTTTCTAGGTATAAGAGTTAAGCAGATATAGGCGAAAGAGAGCCTTTATCCCAAGATTGGTTCTCATCCTTCAGAGACTACGAGTGTAATAGGAGCATCCGTTGACAAAAGGATCACCCTAAGATGATCATCACATGGCTATTGAGTCTGCTAGATCCTCTATTTTCTATTCCTTCGCTGCAAGGTAAAAATGAATTCCATTGTGGAGCGGTATGCACTGCACAAAGGATGCATGTACAGTTGTTAATCCTATCTTTTTTTTATTATCTTTGACTCATCATGATCATGATGTGAGATAGAGAAAACCATTTATTAAATCATCAGGGTAATGATCCATCAACTTGCTAGTGCTTTTTATGAGACACAAGTGGGAGAATTTGTCCTCGAAGCGGAAGAACTACTAAAGTTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACAGGCAAACCCTTATGGGTTGTATCCGAAGACCCGGAAAGGGATGTTTTTATGTCAGCAACAGAAGCCCAAGCTCATGGAATTGTTGATCTTGTAGCGGTTCAATAAAAAATAGCAGGGATTTCACGCAAAAATCCGAAATTTGAGATTTTCTCTTTTTACCGGGGGTTAATATCATATTTTCTATTACTATTAATCTTATTAATTATTAATATCGAATATAGAAGTAATTCATAATCATCCGGTTAGGATTGATCTAAACCAACTCATTATGTATACAATTCGACATGCCAACTATTAAACAACTTATTAAAAACACAAGACAGCCAATCAGAAATGTCACCAAATTGCCCGCCCTTCGGGGATGCCCTCAGCGTCGAGGAACATGTACTAGGGTGTATGTGCGACTCGTTTAGACCATGGATCGGGACAAAAAAAAAAAGAAAGTACAAAATTTTTCCCGTATCAGTGATAAGTACCAGTGAATAGGATAGAAAGAATGGAAGAACTCCGTTCACTACCTAAAAATAAATAAAAAAATATTTATCGTATCCTTTTATTGTGTATCAAATTTATGGTTTCTATTGGTGCAAATCCAATCATCTCAATTTTCAATTTTAGATGAGAAAGAATTCCCCACTGGTAACAAATGCTTAGCCATTAAGCAGAGGAAATCCTATTTAACAGAAGGATTATGGCCTTATTCTTCCAAAAACAAACTAAGAGGGTCAGCTACCCAACTAATCTTCATAATTAAATACCGTTACTGTATAGGTAGATCTTGTTGTGAAAGACCGATTACTAGCTAATTCATGGGTAGAGCCAAAGAGGGTGAACTGTACAAGTTAACAATAACATTGATGAAATAAAAGAAGGAGCTCCAGTGTATAGAGAGGACCTCACCGTTTAAGAAGTAACCATAGAAACGAAGGAACCCACTATTTCTTTATCCATTTCTATTTTGATTTATTTACCTATGTTTGTTTTGATACCTAGTATGAATACAATTTCGTATTTTGGGGTGACTAGAACAAAAAAAGAAATCGTGGTCGGGAAGGTTATAGTAGCAAAAGCCATTGGAATTTTTATTTTATACATTGGAAAAATACGTTTTGTTATTAATAGACTAGGCAAGGAGAAAGGAATAACTGAAAGAAAGGAAATCAATTAGTTATTCATCAAAGTTTCATTTATTCAATGACTAGAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGACTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCAGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGATCGCTCGAATAAATGCAGTAATTCGATCTAATAAGGTAGACTACAGTTATAGTAGATTTATACACAATCTGTACAAGAGGCAGTTGCTTCTTAATCGTAAAATACTTGCCCAAATCGCTATATTAAATAGAAATTGTCTTTATATGATTTCCAATGAGATCATAAAATAAGAAGATTGGAAAGAATCCAGCGGAATGCTTAAAATGGAGTTCTCTGGAGAATGAACTCCGAGAAGGTAGAGTAGAAATTAGTATGATAAAATATGATAATATGATAAAGTGGTCAAAATGAGCAAATATGTTCAATAAAAAAACGATTTATTCTTCTTCCACTATTCTTTTTTTCTTACGACACGACAATCAAATCTAGATTTTCGGATTTTTCGAACAAAGCATCAATCTGCGGTTGAGTTTGGATTAGAATTTTAATTCAATTAAAGAGTAAGCCTATTTATTCCTGGTTCTAAGACCAATAGTTCTAGCGGTCGACTCGCTTCTTTCAAATTGTTTCTCATTATTAAGAAAAGGTAACAAAGATAAAATACGAGCTTGTTTTATAGCAATAGTAATTAAGCGTTGCTGTTTTAAGGTCAATCTATTTACCCGTCTAGATAATATTTTTCCTTGTTCACTAATAAATCGACTAATTAAACTCATGTTTCTATAATCAATTCGATCCCCCGATTGAATCGGGGGCAAACGCCTACGAAAAGATCGTTTGGATTTAAGAGGGAGTCGCTTGGATTTATCCATGGTTTGTTTATTCCTTATCCCGAAAATCCTATTTCGATCGGATCTAAAATGATTTAGAATTAAGAAATAGGATTTGGTTTGTTTATATTTAAATCGAAAATATGTCTAATATATGTAATTTTTAATCTTCCTTGCATTGGAAAAGGGTGACACACAGACGATCGGTTCGATCTATTTCTTTATCTCCCCATGAATCGTATGTTTGTAACAACGGGGACAGAATTTTCTCAATTCCAATCGACTAGGCGTATTGTGTCGATTCTTTTGAGTAATATATCTGGAAATCCCGATGGATTCCTTATTAACACCGTTTCGAACACAACGAGTACATTCCAAAATAACTGTTACTCGGGCATCTTTACCCTTGGCCATGAACCTCCCTTGGATTTTTGATTCACGCAACTCTTCTATTTTCCGATCCAAAATGAAGAAAAAAAGAGAAGTTGGTAACTCGAAATAAAATTATGAAAGATTTCGTTACAATCAAATATAAAATATAGTAATACAATGATTTCTAAATTGAGAATCGCAGTACAGTTTTTCATTTAAGTATCTTGTATGATATTGTTGCCCTAGCCATCACATTTTCGTTCTCATTCTTTTATTAATTCAATTTGAACCCGGCGCCGNGTGTATAGAGAGGACCTCACCGTTTAAGAAGTAACCATAGAAACGAAGGAACCCACTATTTCTTTATCCATTTCTATTTTGATTTATTTACTCTATGTTTGTTTTGATACCTAGTATGAATACAATTTCGTATTTTGGGGTGACTAGAACAAAAAAAGAAATCGTGGTCGGGAAGGTTATAGTAGCTTTTACTTGTTCAAATAACAATTAAGGTGAAGCAGGGTTAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTGTAATAGGAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCACATGGCTATTGAGAACGAATCGAATCAGATGGTTCTATTTCTCAATCTTTCTGACTTGCTCCTACGGAACTAAGGTCGAAAAGATTGAGAAAAATCAGTCATTCACAACCACTGATGAAGGATTCCTCGAAAAGTTAAGGATTAGTAATCATTTTTAGAAATCGAATGGATTCGGTCTTATACATACGCGAGGAAGGTAATCAAAAAAGGAAAGAAGATGAGTTCTTCTTTCTTTTATCACTTAGCTTAGGAGCCGTGCGAGATGAAAGTCTCATGCACGATTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGACTCTGACTCTCCCACTCCAGTCATTGCCTTTCTTTCTGTTACTTTGAAAGTAGCTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCCTTTTTATTTCTCATCAAACGAATAGCATCTTCTTCTGGAAATCCTAGCTATTCTTAGCATGATATTAGGGAATCTCATTGCTATTACTCAAACAAGCATGAAACTTATGCTTGCGTATTCGTCCATCGGTCAAATCGAATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATTGCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTCTTTTGGGCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTTTCTCCACTAGCAAGTATATATATATATATATATATATATATCGCTCTGTCTTGCTCTCTCTCTGTCTCGCTCTACTTATTAGTAGTAATTGGTCATGCATTTGAGCTCGCAGTCTCACTCCCTCTCAGTCTTGCTTGCTCTCCTCATCTCGTTGTCTCGCTCACCCTCTATCTCAAGGAATGGGTCCCTACAGGGACCCGTTTTCCCAACGAGGAATCTCCGCTTCCGTCTACAAATGGTGGGGATGGGGAACCCACCCCCCGCCTCCGTTGCCAACCCTATTGCTATACACTTAATTATTATATCCAAAAAGTGTTGTCTAATGTAATTATTTTTTTTAAAGAAAAAAAAACCAAATCTATCGTTCAACTTGCATTAAAATAATAGTTAAAATTGAAAGTTTTTAAGGTATAGGAAAGAAATCAATATAAATGTACTTGCAATAGATTCATGGGAAATAATAATAATAATAATATAATGATGATGATAAGGATAATTTTTTTAAATGACAAAATAGCTGCAAATATTTTGTAAATATAACAAAATGTCATTATTGATAGATTACTATTATCTATTAGTATCCATCAGTAATAGACGTCTATTAGCAATAATATTTTGTTGTATTTGTAAATATTTTGGCTCTATATTTGAAACGACGACGATAATAATGATAAGAATAAATCAACGGTATAGATAGATTACAACTTAACAATTTACCAGATTCCCGCCATATATTTGGACCAATGAATTTTGGCTAAGGATTAAAGTATCTGTTTTTCAATTGGAGTATTTGTTTTTCTTTTTCTTTTGTTTTTTCTACTACTACTACTTTAGTTTGTAAGTAGTAGTATTTCAACTATCATAGATA

mRNA sequence

ATCAATTCTTTTTCGAGATTGGAGTTTTTACAAGAAGTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCTGCAGGGATACAACAACGAATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTATTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCAGATCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCTGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTACTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCCGCTGCTCAATCAATTATGGGAGAATTTGTCCTCGAAGCGGAAGAACTACTAAAGTTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACAGGCAAACCCTTATGGGTTGTATCCGAAGACCCGGAAAGGGATGTTTTTATGTCAGCAACAGAAGCCCAAGCTCATGGAATTGTTGATCTTGTAGCGACAGCCAATCAGAAATGTCACCAAATTGCCCGCCCTTCGGGGATGCCCTCAGCGTCGAGGAACATAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGACTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCAGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGATCGCTCGAATAAATGCAATA

Coding sequence (CDS)

ATCAATTCTTTTTCGAGATTGGAGTTTTTACAAGAAGTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCTGCAGGGATACAACAACGAATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTATTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCAGATCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCTGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTACTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCCGCTGCTCAATCAATTATGGGAGAATTTGTCCTCGAAGCGGAAGAACTACTAAAGTTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACAGGCAAACCCTTATGGGTTGTATCCGAAGACCCGGAAAGGGATGTTTTTATGTCAGCAACAGAAGCCCAAGCTCATGGAATTGTTGATCTTGTAGCGACAGCCAATCAGAAATGTCACCAAATTGCCCGCCCTTCGGGGATGCCCTCAGCGTCGAGGAACATAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGACTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCAGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGATCGCTCGAATAAATGCAATA

Protein sequence

INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVLEAEELLKLRETITRVYVQRTGKPLWVVSEDPERDVFMSATEAQAHGIVDLVATANQKCHQIARPSGMPSASRNIIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWIARINAI
Homology
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BLAST of CcUC02G035470 vs. NCBI nr
Match: QZL38650.1 (NADH dehydrogenase subunit A [Citrullus naudinianus])

HSP 1 Score: 295.0 bits (754), Expect = 7.2e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

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BLAST of CcUC02G035470 vs. NCBI nr
Match: YP_009326045.1 (NADH dehydrogenase subunit 1 [Citrullus lanatus] >YP_009348087.1 NADH dehydrogenase subunit 1 [Citrullus mucosospermus] >YP_009420850.1 NADH dehydrogenase subunit 1 [Citrullus colocynthis] >YP_009431612.1 NADH dehydrogenase subunit 1 [Citrullus amarus] >YP_009431698.1 NADH dehydrogenase subunit 1 [Citrullus rehmii] >APW82518.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris] >QZL38738.1 NADH dehydrogenase subunit A [Citrullus ecirrhosus] >APD52537.1 NADH dehydrogenase subunit 1 [Citrullus lanatus] >APW82603.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris] >APW82688.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 295.0 bits (754), Expect = 7.2e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

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BLAST of CcUC02G035470 vs. NCBI nr
Match: YP_009456202.1 (NADH dehydrogenase subunit 1 [Lagenaria siceraria] >AUJ21967.1 NADH dehydrogenase subunit 1 [Lagenaria siceraria] >QNM38587.1 NADH-plastoquinone oxidoreductase subunit 1 [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 295.0 bits (754), Expect = 7.2e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. NCBI nr
Match: QZL38739.1 (NADH dehydrogenase subunit A [Citrullus ecirrhosus])

HSP 1 Score: 295.0 bits (754), Expect = 7.2e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

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BLAST of CcUC02G035470 vs. NCBI nr
Match: YP_009751702.1 (NADH dehydrogenase subunit A [Hodgsonia heteroclita] >QIT04435.1 NADH dehydrogenase subunit A [Hodgsonia heteroclita])

HSP 1 Score: 295.0 bits (754), Expect = 7.2e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

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BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 9.7e-76
Identity = 153/165 (92.73%), Postives = 155/165 (93.94%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           I+SFSRLEFL+E YGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  IHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENL PSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADL IG
Sbjct: 71  GVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match: Q06R75 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhA PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 144/165 (87.27%), Postives = 154/165 (93.33%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           I+SFSRLEFL+EVYG +WVL+PILT VLGIT+GVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 12  IHSFSRLEFLKEVYGSIWVLIPILTLVLGITLGVLVIVWLEREISAGIQQRIGPEYAGPL 71

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           G+LQALADGTKLLFKENLFPSRGDTRLF+I  SIAVISILLSYSVIPFGYRL+L DL IG
Sbjct: 72  GILQALADGTKLLFKENLFPSRGDTRLFTIGPSIAVISILLSYSVIPFGYRLILGDLSIG 131

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIA+SS+ PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 132 VFLWIAVSSLAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 176

[Close]
BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match: Q1KXQ8 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=4232 GN=ndhA PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-73
Identity = 146/165 (88.48%), Postives = 152/165 (92.12%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLE L+EVYGI+WVL+PI T VLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLESLKEVYGIIWVLIPIFTPVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           G+LQALADGTKLLFKENL PSRGDTRLFSI  SIAVISILLSY VIPFGYRLVLADL IG
Sbjct: 71  GILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLVIPFGYRLVLADLSIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISS+ P+GLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match: Q14FA3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus alba OX=43335 GN=ndhA PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.7e-73
Identity = 145/165 (87.88%), Postives = 151/165 (91.52%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRL+ L EVYGI+W+LVPILT VLGITIG+LVIVWLEREISAGIQQRIGPEYAGP 
Sbjct: 11  INSFSRLKSLNEVYGIIWMLVPILTLVLGITIGILVIVWLEREISAGIQQRIGPEYAGPF 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVIS LLSYSVIPFGY  VLADL+IG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISTLLSYSVIPFGYHFVLADLNIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISS+ PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match: A4GYX1 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=ndhA PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.7e-73
Identity = 145/165 (87.88%), Postives = 151/165 (91.52%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRL+ L EVYGI+W+LVPILT VLGITIG+LVIVWLEREISAGIQQRIGPEYAGP 
Sbjct: 11  INSFSRLKSLNEVYGIIWMLVPILTLVLGITIGILVIVWLEREISAGIQQRIGPEYAGPF 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVIS LLSYSVIPFGY  VLADL+IG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISTLLSYSVIPFGYHFVLADLNIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISS+ PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match: A0A1P8LE62 (NADH-quinone oxidoreductase subunit H OS=Citrullus mucosospermus OX=519315 GN=ndhA PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match: A0A1P8LDV6 (NADH-quinone oxidoreductase subunit H OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhA PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match: A0A6H0ERE2 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Hodgsonia heteroclita OX=386184 GN=ndhA PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match: A0A2I6C0A5 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lagenaria siceraria OX=3668 GN=ndhA PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match: A0A343A8G7 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Citrullus lanatus OX=3654 GN=ndhA PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 157/165 (95.15%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSFSRLEFL+EVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           GVLQALADGTKLLFKENLFPSRGDTRLFSI  SIAVISILLSYSVIPFGYRLVLADLHIG
Sbjct: 71  GVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           VFLWIAISSV PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 VFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 255.8 bits (652), Expect = 4.5e-68
Identity = 135/165 (81.82%), Postives = 146/165 (88.48%), Query Frame = 0 

Query: 1   INSFSRLEFLQEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPL 60
           INSF +LE L+EVYG++W+ VPI + VLGI  GVLVIVWLEREISAGIQQRIGPEYAGPL
Sbjct: 11  INSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPL 70

Query: 61  GVLQALADGTKLLFKENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIG 120
           G+LQALADGTKLLFKENL PSRG+T LFSI  SIAVISILLSYSVIPF   LVLADL+IG
Sbjct: 71  GILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIG 130

Query: 121 VFLWIAISSVTPIGLLMSGYGSNNKYSFLGGLRAAAQSIMGEFVL 166
           +FLWIAISS+ PIGLLMSGYGSNNKYSFLGGLRAAAQSI  E  L
Sbjct: 131 IFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL 175

[Close]
BLAST of CcUC02G035470 vs. TAIR 10
Match: ATCG00660.1 (ribosomal protein L20 )

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-24
Identity = 54/65 (83.08%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 240 IKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWIA 299
           IKRGYIARRRRTK+RLFASSFRGAHSRLTRT+TQQ+IRAL SA+RDRG++KR+FR+LWI 
Sbjct: 4   IKRGYIARRRRTKLRLFASSFRGAHSRLTRTMTQQRIRALVSAHRDRGKRKRDFRRLWIT 63

Query: 300 RINAI 305
           RINA+
Sbjct: 64  RINAV 68

[Close]
BLAST of CcUC02G035470 vs. TAIR 10
Match: ATCG00670.1 (plastid-encoded CLP P )

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-24
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0 

Query: 161 GEFVLEAEELLKLRETITRVYVQRTGKPLWVVSEDPERDVFMSATEAQAHGIVDLVA 218
           GEF+LEAEELLKLRETITRVYVQRTGKP+WV+SED ERDVFMSATEAQAHGIVDLVA
Sbjct: 138 GEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLVA 194

[Close]
BLAST of CcUC02G035470 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 105.9 bits (263), Expect = 5.8e-23
Identity = 60/147 (40.82%), Postives = 95/147 (64.63%), Query Frame = 0 

Query: 18  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 77
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 78  ENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVTPIGL 137
           E + PS  +  LF +      +  L++ +V+PF Y +VL+D +IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 138 LMSGYGSNNKYSFLGGLRAAAQSIMGE 163
           +++G  SN+KY+FLG LR+AAQ +  E
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYE 148

[Close]
BLAST of CcUC02G035470 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 105.9 bits (263), Expect = 5.8e-23
Identity = 60/147 (40.82%), Postives = 95/147 (64.63%), Query Frame = 0 

Query: 18  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 77
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 78  ENLFPSRGDTRLFSIRSSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVTPIGL 137
           E + PS  +  LF +      +  L++ +V+PF Y +VL+D +IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 138 LMSGYGSNNKYSFLGGLRAAAQSIMGE 163
           +++G  SN+KY+FLG LR+AAQ +  E
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYE 148

The following BLAST results are available for this feature:
BLAST of CcUC02G035470 vs. NCBI nr
Match NameE-valueIdentityDescription
QZL38650.17.2e-7695.15NADH dehydrogenase subunit A [Citrullus naudinianus][more]
YP_009326045.17.2e-7695.15NADH dehydrogenase subunit 1 [Citrullus lanatus] >YP_009348087.1 NADH dehydrogen... [more]
YP_009456202.17.2e-7695.15NADH dehydrogenase subunit 1 [Lagenaria siceraria] >AUJ21967.1 NADH dehydrogenas... [more]
QZL38739.17.2e-7695.15NADH dehydrogenase subunit A [Citrullus ecirrhosus][more]
YP_009751702.17.2e-7695.15NADH dehydrogenase subunit A [Hodgsonia heteroclita] >QIT04435.1 NADH dehydrogen... [more]
BLAST of CcUC02G035470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QD369.7e-7692.73NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36... [more]
Q06R751.2e-7387.27NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Jasminum nudiflorum O... [more]
Q1KXQ81.6e-7388.48NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=... [more]
Q14FA37.7e-7387.88NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus alba OX=43335... [more]
A4GYX17.7e-7387.88NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus trichocarpa O... [more]
BLAST of CcUC02G035470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1P8LE623.5e-7695.15NADH-quinone oxidoreductase subunit H OS=Citrullus mucosospermus OX=519315 GN=nd... [more]
A0A1P8LDV63.5e-7695.15NADH-quinone oxidoreductase subunit H OS=Citrullus lanatus subsp. vulgaris OX=26... [more]
A0A6H0ERE23.5e-7695.15NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Hodgsonia heteroclita... [more]
A0A2I6C0A53.5e-7695.15NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lagenaria siceraria O... [more]
A0A343A8G73.5e-7695.15NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Citrullus lanatus OX=... [more]
BLAST of CcUC02G035470 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01100.14.5e-6881.82NADH dehydrogenase family protein [more]
ATCG00660.14.0e-2483.08ribosomal protein L20 [more]
ATCG00670.15.2e-2492.98plastid-encoded CLP P [more]
ATMG01120.15.8e-2340.82NADH dehydrogenase 1B [more]
ATMG00516.15.8e-2340.82NADH dehydrogenase 1C [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005813Ribosomal protein L20PRINTSPR00062RIBOSOMALL20coord: 278..304
score: 53.84
coord: 248..277
score: 42.32
IPR005813Ribosomal protein L20PFAMPF00453Ribosomal_L20coord: 240..303
e-value: 4.1E-17
score: 62.2
IPR005813Ribosomal protein L20CDDcd07026Ribosomal_L20coord: 242..303
e-value: 1.31535E-26
score: 98.7105
NoneNo IPR availableGENE3D3.90.226.10coord: 135..229
e-value: 2.7E-11
score: 45.4
NoneNo IPR availableGENE3D6.10.160.10coord: 240..292
e-value: 4.1E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR11432:SF3NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1coord: 16..167
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 24..165
e-value: 3.0E-43
score: 148.3
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 16..167
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 161..218
e-value: 1.1E-11
score: 44.9
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved sitePROSITEPS00667COMPLEX1_ND1_1coord: 61..76
IPR035566Ribosomal protein L20, C-terminalSUPERFAMILY74731Ribosomal protein L20coord: 240..303
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 157..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G035470.1CcUC02G035470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006412 translation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0016020 membrane
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0048038 quinone binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome