CcUC02G035080 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTTTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCAATTTCTGAGAAAGAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTCATGGTACTTTTGCTTCTTCCTTTGTGTTGGGTGTGATGAAAAACAAATTTATGTTTGGTTGAGATAGTGTTGATCGTTTGATGAATTTACTTGTGGGTTCGTTGTGATTGTTGTTTTGAAGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTAATGTATTGAACTATCTAATAACTTGCACCTTGGAAATTTATCTTCTGTTTGATTGATAATAAGGATCAAGGTTATTATACGCCCATGAATTCATTAAGTAGATGTTCCTGTTGGTTTTCGAGTAGTAAAAGCCTATTTTAATGGAGGACATGGGACTTGGTCCTATCGTCTTTCTTCTGTTCTGTTCACTAGCCTAATGACGCACTTACTCCCTACGGACATCGTTAAAGCCCCTTGTACAACTTTTAACTCTGGTGCAAAATTAAGGGAAAAAGAGTGAGAGTGCATTACTGGGTTTAACAAGATCACTGTTTATGTTTGTTTTGATCACTAAATTGGAAATTTTGTGGCTGAGTTCTGGACAGAATATTTGGGAACGTTTTCTTTTCAAGACATTAAGTTGAGAACCAGACTTAAATCCAAGTGCAGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCCGAAGCTGAGGTAAGTTTAGCAATCAATTGGTGAGCTATACCACAACGTGAAGTTAATAAAATTTTGTTTTTCGAAATTTTGGTGTCTTGTTCAAAGCCTTAGATTCTATTTGTTAGGTAGGCGCATTTTCTCCCGTAGAGAGAGAGGGAAAGGTTGAGTAGTTTAGAGTGGATAAGGATTATGAGGTATACTTGGGAATTGCATTTACAGTTAAGTTTCTTGTTTGATAGGATTGAATTTTGTTTCTCTTTTAAAATAACTAGGATATAGTCTAAGTTGATGTTCTGAGAGAAATGAAGAAAAGGAGAAGGACCAATCTGGGACGTTAAAAATGGATGAAGAGCGTGAAACTAGTACTTAAGGATCTCTGCTCGACAATTTTGTTAATTGGCATGGAAATAATTGAATGGAAATTACTATTATAGTTACTCTTTCTTATTCAACAAATACTGGTTTCTAAAAAGTCCTGCACTATGACATTATTGACATGTAAACAAAAGTTATAATAAAGTAACTCTAGTTGGCTTGAATAAAAAGGAGAAAAAAAAAAGAGTAATTGATAAGGTGTTTAGGCAATGAGCTTTACCTAGAAGCTAGAACATGTACTTTTGCTATGTTGACTAGATTATCATACACTACTAATGTTGATGTTCATTTTATATTTCTATCAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGAAAACTTAGGTGAGCAGGAATCTGGATCAGGTTGGCTCTTATACCTTTCCTTCCTGTTGTTGCAATGTTATGTTTTGGTTGAGATTGAGACTTCATTGGTTAAGAGCTTAAGACTTCCTGGTGGCTGGTGGTATGAGTTTTCCTTCAAGTTAATCTTGGGTTGAATGTGTGAGTTAAGCTGAAATTTGACTTTTTTCCAAGTTGACTCATCTCCATCGTACTCTTTATGAAATATCTCTGGATTGACAAGTTGCCATTGAAAGACGCGTGAGGGCATGTCTACCATATTACACATATGAATAAATGTACTTAGGGGCTGTTTGGGGAATTGGAACGTAATAGGATCACTGGGAATCAGAGGAGTATTGAAATGTATGAGGAATTGAGGACGAAATGAAAATGAGATTGTGAAGCGTGAAAACAGTGAGAAATAAGGTTGGGTTGAAAACTGTTAGAACAGAATGAGTTTTGTATTACAAATCGAGCCCAAAATGCTCAATCCAAATATTGATTTTAGATTACATTACATTACAATCTCATTCAATTACAGTCCCCCAAACACCCCCTTAGCTTTTGGAGTTGTCACCTCCTTTGTATGCATCATAATTGGGTTTGGATTTTTATAAGAACTACTTGTAAGCATTGGTAAAACTGATGAATTATGATGATGTTAATGTTTCTTTTCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGATGGGCCAAAGATTGTAGAAGAGGATGCAGAATATGCCTGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGTAGTGTCAGGATTAAATGCCTTGACTTAGAGATTTAAAGCTCATTGACACATGGTCATCAACAAGCTTACTAGAAGGATTAGTGATGTATCATTAACCATTTCTGATGATTGCTTTCTTTGAAACTTTTTCAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGTAGTAAAGAGCTACTGGATAAGTATCAACAACAACAAGAGGCTTCTACCAATCCATCAAATGTGACTAAACTCTTATTTACTCATTCTTTTGCTTTTCTATCTATTACTATGTATTTTTGTTATTTAGTGAATAGAATTGTTTTGTTAAAACAGCATTCAGTCTCAAATTATGTACATTTTATCATGCAGTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGGTTAGTCTTCACCTCTTTACTTCCCTTCACTTGTCCAGTATCAAATGTTATTTGCCATGTACATGTGGCGGCATTATTTCATGTTTTATATCAGTTATAGGATGATAAACTATTCTTACCGCCATATCTTATCCTTTCCAACTCTACTTGTTAGAATGATTTCCCTGGTTTCCATAAATAATATAGAATAAATGCTAAAATGGTAAAACGGTTTCTCAACTTTTCAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGCTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATCGCCTCCATCTACCAGAGAGGTACTTAAAGCTTTTTTATCATATAGAACTTTTAGGTGCCCCGTTGGGCCAATATGGATTTTCCCTTAATTTTGAGGTTGTTAATATCAGATAACTTCGAGGCTAGTTATAATTTTTGGCCTCATTAATCCATGTTGTATCCTTTCTCTCGGGTGTAGGCTTTCACAGGATCCATAATCGAGCGCCCTCCTGCTATACCAAAAACTTCTAAGCAAGAAACAGGAACTCCATTGCAGGTGGGTTTGCTTAGTTCACGCCATTCTTATTGCCATCATCTTACTCTTTAAATTATTGATGAAATAGCTAATTACTTTTTGATTTGGCAGCCTTCAGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAGCAAGCTGCACACGACAATAACGTACTTGAAAAAAGCTGAAAGTTTTGCCAGCAATTGATTTTGTTTGCTAGTTTAGATAAAATTTTGTTCAAGTTCTTTACGCCTTGGTCTGGTTCTCCAACAATATTAACTAAAGAGATCGTATTGCCTTAGATTGCAACAGGCAGAAAGACCGACTAACTCTCTGATTAACATACTAAATTTATGGTATGAAACACTTGTGATGGTTCGC ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTTTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCAATTTCTGAGAAAGAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCCGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGAAAACTTAGGTGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGATGGGCCAAAGATTGTAGAAGAGGATGCAGAATATGCCTGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGTAGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGTAGTAAAGAGCTACTGGATAAGTATCAACAACAACAAGAGGCTTCTACCAATCCATCAAATGTGACTAAACTCTTATTTACTCATTCTTTTGCTTTTCTATCTATTACTATTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGGTTAGTCTTCACCTCTTTACTTCCCTTCACTTGTCCAGTATCAAATGTTATTTGCCATACGTGTCAAGTGGCAAAAATTCTTTGGCTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATCGCCTCCATCTACCAGAGAGGCTTTCACAGGATCCATAATCGAGCGCCCTCCTGCTATACCAAAAACTTCTAAGCAAGAAACAGGAACTCCATTGCAGCCTTCAGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAGCAAGCTGCACACGACAATAACGTACTTGAAAAAAGCTGAAAGTTTTGCCAGCAATTGATTTTGTTTGCTAGTTTAGATAAAATTTTGTTCAAGTTCTTTACGCCTTGGTCTGGTTCTCCAACAATATTAACTAAAGAGATCGTATTGCCTTAGATTGCAACAGGCAGAAAGACCGACTAACTCTCTGATTAACATACTAAATTTATGGTATGAAACACTTGTGATGGTTCGC ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTTTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCAATTTCTGAGAAAGAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCCGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGAAAACTTAGGTGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGATGGGCCAAAGATTGTAGAAGAGGATGCAGAATATGCCTGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGTAGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGTAGTAAAGAGCTACTGGATAAGTATCAACAACAACAAGAGGCTTCTACCAATCCATCAAATGTGACTAAACTCTTATTTACTCATTCTTTTGCTTTTCTATCTATTACTATTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGGTTAGTCTTCACCTCTTTACTTCCCTTCACTTGTCCAGTATCAAATGTTATTTGCCATACGTGTCAAGTGGCAAAAATTCTTTGGCTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATCGCCTCCATCTACCAGAGAGGCTTTCACAGGATCCATAATCGAGCGCCCTCCTGCTATACCAAAAACTTCTAAGCAAGAAACAGGAACTCCATTGCAGCCTTCAGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG MEAGRAKGTVTPLSFLFPAQDAHKAATRVQDAISEKERELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENLGEQESGSGVNKQDVPSVSGVDGPKIVEEDAEYACIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKVGSTSTWLRDENVGSKELLDKYQQQQEASTNPSNVTKLLFTHSFAFLSITIVQGCRYNLHPKVSLHLFTSLHLSSIKCYLPYVSSGKNSLAQTQRVRNPNPAAKSVTFAEVKEKNQRSPPSTREAFTGSIIERPPAIPKTSKQETGTPLQPSGSQPSKPVSRFKMQRR Homology
BLAST of CcUC02G035080 vs. NCBI nr
Match: XP_038901192.1 (RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida] >XP_038901193.1 RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida]) HSP 1 Score: 587.4 bits (1513), Expect = 9.5e-164 Identity = 331/411 (80.54%), Postives = 344/411 (83.70%), Query Frame = 0
BLAST of CcUC02G035080 vs. NCBI nr
Match: XP_031742955.1 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis sativus] >XP_031742956.1 RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 550.8 bits (1418), Expect = 9.8e-153 Identity = 315/411 (76.64%), Postives = 338/411 (82.24%), Query Frame = 0
BLAST of CcUC02G035080 vs. NCBI nr
Match: XP_016900539.1 (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo]) HSP 1 Score: 548.9 bits (1413), Expect = 3.7e-152 Identity = 313/411 (76.16%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. NCBI nr
Match: TYK04987.1 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 548.9 bits (1413), Expect = 3.7e-152 Identity = 313/411 (76.16%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. NCBI nr
Match: XP_004139947.1 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis sativus] >KAE8646850.1 hypothetical protein Csa_021051 [Cucumis sativus]) HSP 1 Score: 547.7 bits (1410), Expect = 8.3e-152 Identity = 312/411 (75.91%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy Swiss-Prot
Match: Q54HG4 (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum OX=44689 GN=rmp PE=3 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19 Identity = 71/213 (33.33%), Postives = 113/213 (53.05%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy Swiss-Prot
Match: Q3TLD5 (Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 4.2e-13 Identity = 67/220 (30.45%), Postives = 113/220 (51.36%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy Swiss-Prot
Match: O94763 (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 SV=3) HSP 1 Score: 76.6 bits (187), Expect = 7.1e-13 Identity = 66/240 (27.50%), Postives = 118/240 (49.17%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy Swiss-Prot
Match: Q3B7M7 (Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.0e-12 Identity = 63/242 (26.03%), Postives = 117/242 (48.35%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy Swiss-Prot
Match: Q9W148 (Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster OX=7227 GN=uri PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.5e-05 Identity = 68/259 (26.25%), Postives = 108/259 (41.70%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy TrEMBL
Match: A0A5D3BZL3 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002120 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.8e-152 Identity = 313/411 (76.16%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy TrEMBL
Match: A0A1S4DX32 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.8e-152 Identity = 313/411 (76.16%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy TrEMBL
Match: A0A0A0KB27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127400 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 4.0e-152 Identity = 312/411 (75.91%), Postives = 333/411 (81.02%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy TrEMBL
Match: A0A5A7V404 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003700 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 9.0e-152 Identity = 313/411 (76.16%), Postives = 332/411 (80.78%), Query Frame = 0
BLAST of CcUC02G035080 vs. ExPASy TrEMBL
Match: A0A1S3BK98 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 2.2e-150 Identity = 312/411 (75.91%), Postives = 332/411 (80.78%), Query Frame = 0
BLAST of CcUC02G035080 vs. TAIR 10
Match: AT1G03760.1 (Prefoldin chaperone subunit family protein ) HSP 1 Score: 210.3 bits (534), Expect = 2.9e-54 Identity = 162/413 (39.23%), Postives = 225/413 (54.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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