CcUC02G034160 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G034160
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein Ycf2
Location	CicolChr02: 29914326 .. 29914826 (-)
RNA-Seq Expression	CcUC02G034160
Synteny	CcUC02G034160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATCGAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATGTTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGA

mRNA sequence

ATGATTCATCGAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATGTTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGA

Coding sequence (CDS)

ATGATTCATCGAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATGTTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGA

Protein sequence

MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSIRSKKKDWNINLIDLISIIPNPIKISSLVGGRIRTNRIF

Homology

[Close]

BLAST of CcUC02G034160 vs. NCBI nr
Match: YP_009752370.1 (Ycf2 protein [Bryonia marmorata] >YP_009752388.1 Ycf2 protein [Bryonia marmorata] >QIT04344.1 Ycf2 protein [Bryonia marmorata] >QIT04362.1 Ycf2 protein [Bryonia marmorata])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. NCBI nr
Match: QJR53001.1 (hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical protein RF2 [Herpetospermum pedunculosum])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1318 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1377

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1378 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1437

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1438 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1467

[Close]

BLAST of CcUC02G034160 vs. NCBI nr
Match: YP_010131137.1 (hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75785.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75802.1 hypothetical protein RF2 [Benincasa hispida] >QSQ72354.1 Ycf2 protein [Benincasa hispida] >QSQ72372.1 Ycf2 protein [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. NCBI nr
Match: YP_009752286.1 (Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanthes baviensis] >QIT04260.1 Ycf2 protein [Trichosanthes baviensis] >QIT04277.1 Ycf2 protein [Trichosanthes baviensis])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. NCBI nr
Match: YP_009420838.1 (Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_009431686.1 Ycf2 [Citrullus rehmii] >YP_009431705.1 Ycf2 [Citrullus rehmii] >ASP44531.1 Ycf2 [Citrullus colocynthis] >ASP44534.1 Ycf2 [Citrullus colocynthis] >ASY96311.1 Ycf2 [Citrullus rehmii] >ASY96314.1 Ycf2 [Citrullus rehmii])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1314 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1373

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1374 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1433

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1434 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1463

[Close]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.2e-73
Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESP ISTHLRSPNVREFLYSILFLLLVA Y+VRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1315 MIHRNNESPLISTHLRSPNVREFLYSILFLLLVATYIVRTHLLFVSRAYSELQTEFEKVK 1374

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            S MIPSYM+ELRKLLDRYPTSELNSFWLKNLFLVALE+LGDSLEEI GSASGGNMLWGGG
Sbjct: 1375 SWMIPSYMMELRKLLDRYPTSELNSFWLKNLFLVALEKLGDSLEEIRGSASGGNMLWGGG 1434

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYG KSIRSKKK WNINLIDLISIIPNPI
Sbjct: 1435 PAYGFKSIRSKKKYWNINLIDLISIIPNPI 1464

[Close]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot
Match: B1NWJ3 (Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-71
Identity = 141/150 (94.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNE P ISTHLRSPNVREFLYSILFLLLVA YLV THLLFVS AYSELQTEFEKVK
Sbjct: 1311 MIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVCTHLLFVSHAYSELQTEFEKVK 1370

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEE+ GSASGGNMLWGGG
Sbjct: 1371 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDFLEEMRGSASGGNMLWGGG 1430

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKK WNINLIDLISIIPNPI
Sbjct: 1431 PAYGVKSIRSKKKFWNINLIDLISIIPNPI 1460

[Close]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-71
Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNE P IST LRSPNVREFLYSILFLLLVA YLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1319 MIHRNNEPPLISTRLRSPNVREFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVK 1378

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI GSASGGNMLWGGG
Sbjct: 1379 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGG 1438

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKK +NINLIDLISIIPNPI
Sbjct: 1439 PAYGVKSIRSKKKFFNINLIDLISIIPNPI 1468

[Close]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-71
Identity = 142/150 (94.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNE P IST LRSPNVREFLYSILFLLLVA YLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNEPPLISTRLRSPNVREFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI GSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKK  NINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKFLNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot
Match: Q2QD30 (Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLL+AVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1028 MIHRNNESPSISTHLRSPNVREFLYSILFLLLIAVYLVRTHLLFVSRAYSELQTEFEKVK 1087

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPT E NSFWLKNLFLVALEQLGDSLEEIWGSAS      GGG
Sbjct: 1088 SLMIPSYMIELRKLLDRYPTYERNSFWLKNLFLVALEQLGDSLEEIWGSAS------GGG 1147

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLI+LISIIPNPI
Sbjct: 1148 PAYGVKSIRSKKKDWNINLINLISIIPNPI 1171

[Close]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1314 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1373

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1374 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1433

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1434 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1463

[Close]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL
Match: A0A6H0ET42 (Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1313 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1372

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1373 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1432

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1433 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1462

[Close]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL
Match: A0A6H0EV63 (Protein Ycf2 OS=Corallocarpus boehmii OX=386154 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1324 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1383

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1384 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1443

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1444 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1473

[Close]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL
Match: A0A6M3RUH1 (Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL
Match: A0A6H0ESM3 (Protein Ycf2 OS=Trichosanthes tubiflora OX=1144424 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK
Sbjct: 1316 MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 1375

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG
Sbjct: 1376 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 1435

Query: 121  PAYGVKSIRSKKKDWNINLIDLISIIPNPI 151
            PAYGVKSIRSKKKDWNINLIDLISIIPNPI
Sbjct: 1436 PAYGVKSIRSKKKDWNINLIDLISIIPNPI 1465

[Close]

BLAST of CcUC02G034160 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-67
Identity = 136/153 (88.89%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNES  ISTHLRSPNVRE LYSILFLLLVA Y+VRTHLLFVSRAYSELQTEFEK+K
Sbjct: 1328 MIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIK 1387

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI G  SGGNMLWGG 
Sbjct: 1388 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGD 1447

Query: 121  PAYGVKSIRSKKKDWNIN---LIDLISIIPNPI 151
            PAYGVKSIRSKKKD  IN   +IDLISIIPNPI
Sbjct: 1448 PAYGVKSIRSKKKDLKINFIDIIDLISIIPNPI 1478

[Close]

BLAST of CcUC02G034160 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-67
Identity = 136/153 (88.89%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1    MIHRNNESPSISTHLRSPNVREFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVK 60
            MIHRNNES  ISTHLRSPNVRE LYSILFLLLVA Y+VRTHLLFVSRAYSELQTEFEK+K
Sbjct: 1328 MIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIK 1387

Query: 61   SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGG 120
            SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI G  SGGNMLWGG 
Sbjct: 1388 SLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGD 1447

Query: 121  PAYGVKSIRSKKKDWNIN---LIDLISIIPNPI 151
            PAYGVKSIRSKKKD  IN   +IDLISIIPNPI
Sbjct: 1448 PAYGVKSIRSKKKDLKINFIDIIDLISIIPNPI 1478

The following BLAST results are available for this feature:

BLAST of CcUC02G034160 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009752370.1	3.9e-76	100.00	Ycf2 protein [Bryonia marmorata] >YP_009752388.1 Ycf2 protein [Bryonia marmorata...	[more]
QJR53001.1	3.9e-76	100.00	hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical ...	[more]
YP_010131137.1	3.9e-76	100.00	hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protei...	[more]
YP_009752286.1	3.9e-76	100.00	Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanth...	[more]
YP_009420838.1	3.9e-76	100.00	Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_00...	[more]

BLAST of CcUC02G034160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT6	7.2e-73	94.00	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
B1NWJ3	1.0e-71	94.00	Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1	[more]
A4GYV4	1.8e-71	94.67	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]
Q14F97	3.9e-71	94.67	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
Q2QD30	1.1e-70	93.33	Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1	[more]

BLAST of CcUC02G034160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A343F2F1	1.9e-76	100.00	Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ET42	1.9e-76	100.00	Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1	[more]
A0A6H0EV63	1.9e-76	100.00	Protein Ycf2 OS=Corallocarpus boehmii OX=386154 GN=ycf2 PE=3 SV=1	[more]
A0A6M3RUH1	1.9e-76	100.00	Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ESM3	1.9e-76	100.00	Protein Ycf2 OS=Trichosanthes tubiflora OX=1144424 GN=ycf2 PE=3 SV=1	[more]

BLAST of CcUC02G034160 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	4.6e-67	88.89	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	4.6e-67	88.89	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 1..151 e-value: 2.4E-89 score: 300.1
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 6..150
None	No IPR available	PANTHER	PTHR33078:SF26	PROTEIN YCF2	coord: 6..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G034160.1	CcUC02G034160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity