CcUC02G033550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G033550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Superoxide dismutase [Cu-Zn]
Location	CicolChr02: 29232201 .. 29236465 (+)
RNA-Seq Expression	CcUC02G033550
Synteny	CcUC02G033550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTATTATGGAAAGATCCTTGTTTTGGTGGGTCGGTGGAATTAAAATCCTGAGTCCACACGTGGTGTCTTCTGGATTCGCAACGACGATTTCGAAATCATGATTTCATCCTTCGCCTTTTGCATGTTCGCTACCGATTCCTCCACCCTCCCATGCTTACAAATCTTGCGCCGCTTCATTCTTCTCTTCCTCTTCTCTTTCGACTACAGTGAAGCTGATCCTAGGTAATGTTTCTCTCCCATCTTTAGCTGATCCTACGAAGATAAATTATGCTTCACTGCTTTCCAGTTTCACGTGGTTGTTACGACTTACTAATTAAAATTCATCGCTGAGATTTGTATGGTTTTGATGGTGTGTTTGATATCATTTTCATTTCTCCTTACTTAGTGTTGAATAGAAAGAAAAATTCATGGCGATTTCTGGAATAATAACAGATCACGGATAGTTATCGGGTTTTTTTTAATACTTATTTTGGCATGTTGAAGTTCCAAAATACCAAAAGTTGTACTCGCCTACTTTCCAGTTTTCATGGTAGCCTAGCTGTGAGTTATAACTCATATGCTGTTGTTTTTTCAGTTCAATGTTCGCTGTTGGATATCGATTTCGCTCGTTTAATAGATAAGAGGGGGATTTCTAATGGTACAAGACCTTTTGTTAACTGTAGGTAAAAATGTTCAGTTTGAAAACTCAGGATCCAAATGCAATCTAAACCAAACTTCAGGAACCAAAAGTGTAAATTTTTAACATCCTCCCAACTCCCGCCTGGCCTCTTCTTGATTATTACATGTTGAACTGATGAGCCCCTTCATCAAACTGATGTAACAGTGTTTAACTGACCACACTTTGAACTTTTTTTAAGGATGTTGAACATTAGCATTGATCTTCTCACTCAAATTTGGCCACTGGGAATTATTTTTTGTGTCTTTCAGATGGTTCCATTTTGCTTTTATGCATTTGAATTGTTCGTTAACTTTTACTTTGATGAATATTTTTGAAAGTGAAATTTCCTTTAGTTGACTTTATTGATCAGTATCCAATTTTACCAGTTATTTCAGATGTTCTGATAACCTTCATTGGATTTGAGTCCAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAAGGAGTCAGTGGAACTGTCCTCTTTAGCCAAAATGGCAGTGGTAGCTCAAATCAGAGTTCGAAATTTAAAATTTAAATGCTTACAGATTCTTTGTTTTCTCTTTTTGTAGTTGTTGAAAAAGGAAAATATTTGGGAGATATTTTAGAATTTATCTCTTTCCTTATATATGTTTTCAATATTTTTTCCTTGTTTGAGTTTCTTATCTCTATTTATTCTTCCTCTTGTAATTCTTTGATTGTATCAAACAAATAAAGAAAAAGAGAAACTTCTATCGTGGTTTTTTCTCCCTAATCTAGGGTTTTCCACGTACACCTTTGTGTTATTTTTCTTTCTCTCTTTCAATAGTAGTTTTTAATTTTGTCCATATATTTTTCAGGTTCAACTACAGTTACAGGAAATATTTCTGGCCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACAAATGGTTGCTTATCAGCTGGTACATTCTCATGATAACGCCCTCTTAGTTCTTTCAAGTTAGATACAGAGTGTCTATTGGAACTACTGGAACATTATAATTCCACTCGCAAGCAAATTGGTTGTGCAGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCCAGTGATGAGAATCGTCATGTTGGTGATCTTGGAAATTTGGTTGCCGGTGATGATGGTCTGTTCAATGCTATTCCACACTTTTCATTTTCTCCCTGAAGTAAATTTGAGTAAACTCGAACCCAAACCATTAGCCCATCCAAAATGCATAATACTGGACTCCTTCAAGGAATCCAGTTTCCTCTCCACCCACCTATCAATTACAATATTTCAATAAATGTCACTGAATTTCATGTTAAAGCGCCCTTTCTTTTCCTTTTTGAGGATTAATTTGACACAACTGTTGTTACGTCTACTGTACAGGTACTGCTACTTTCACTATTATTGACAAGCAGGTTTGGACAATTTTATATTTATTTGGATTTTTCACCATCTCTCCTATCAACTAGTGAGCATTACGTATCTCTATGTGCAGATTTCCCTCGTTGGACCAAATTCCGTTCTTGGAAGGGCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTAATTTTATATATCTTCAATGCTATATTTCTAATAAGAATCCCATACGTTTAGGACTAATCTAATCATTCAAAGATTTTAATGCTTGGCCTAAAGAAGTTAACCTACAATTGCATTAATTGTAACCATGCTTCACTATCACCTTGGTATTAATTTCATCTTCTTTGAATTCAGTGATATACTTTTGGGGTTCCTCCCATACTTCACTTTGTATGAGCATAACATCCATTTTCTTCACATTTTTATCACCTTTTTTTTTATTTTTTTATTTTTTATTTTTTTATTTTTTATTTTTTTATTTTTACTATTATGTGGGGTAGGGGGATCGAACCTCAGACGGAGGTTGGTAGTACATATTGATACCGGTTGACCTATGTTCATGTTGTTTTGTATCACCAATTTTACTTAATCTTAAACGAAGAGATTATTTAATGTGCTGGAAGTATCAATCTTTGAAATATATGTTTCATCTCTGCTTGTCAAGGAGGTGACATCATCAGGATGACCAAATAAAGAAATCTGAAGCATAATCTGTGAACTGTTATGATCTTTTCTGCAGGTCGAACCGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATATCCTGTGGTAAGTTACCGTATGATACTAATTTTCACATTGCTTTTGATTATGCTCTGCTATCCATACGATTTGAAAGAGGGGACACTCACAATATGTATCAGCCTCTCATGTTTACTTGTTCAAACCCACATTTTTTCTTTTAATCAAACTTTAAATTTTGATGTTGATAATACAAGTTCATGTCAGTTGGGTAATGGTCACGTTGGCTCAAACTTGCAATTTTCTCTATTGTGGATATAAAGTGTTATACTCTTCTAACAAACATACAGTTCTAAATAATGTGGCTCTTACACTTAACATAAATGTATAGTGACGTTATGTGACAAATTGAACAATATATGACGAATGAAGCTGGTTAGACATTAGTGTCTTTTTATGGTTAAAATGCCATTGTTTCGTTTCATTGTAGCCCCTTTGTTCGTTTTGTTAGTTTGTTGTTGATTTTCTCTTTAAAAAAAAGTTAATCATTATTATCATGAAAATTAGTATCATTATTTAACCAATGAAAGTGCAATTACTTTATGTATACACACGCCATGACTTTGCTGGTTTTAAAAGTGCTTTGCTATACAATATACTTTACGTGCATCTTTTTTAACTGGCACAAACAGAGTTGGCATCTTGCATATAATGATTGGGACTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTGTGGGTTGGGAAAAATATGCCATCAAATACTGGAGCATGAACTTTTTGGTCGGCATAAGGGATTTGTTATTGTGTTTCTCGCAGGCGTTATTGGGGTGCAAGAGTGATGATACACTTCGACTTGCATGGTCTGTAATGATTGATGAAGATGCAAAGCTGTATTTTAGTTTGGAACTTATATGTTGTAGTTAAAATAAGATAGCTTCGATCAAGCCTTGTATCATAA

mRNA sequence

GATTATTATGGAAAGATCCTTGTTTTGGTGGGTCGGTGGAATTAAAATCCTGAGTCCACACGTGGTGTCTTCTGGATTCGCAACGACGATTTCGAAATCATGATTTCATCCTTCGCCTTTTGCATGTTCGCTACCGATTCCTCCACCCTCCCATGCTTACAAATCTTGCGCCGCTTCATTCTTCTCTTCCTCTTCTCTTTCGACTACAGTGAAGCTGATCCTAGTTATTTCAGATGTTCTGATAACCTTCATTGGATTTGAGTCCAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAAGGAGTCAGTGGAACTGTCCTCTTTAGCCAAAATGGCAGTGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACAAATGGTTGCTTATCAGCTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCCAGTGATGAGAATCGTCATGTTGGTGATCTTGGAAATTTGGTTGCCGGTGATGATGGTACTGCTACTTTCACTATTATTGACAAGCAGATTTCCCTCGTTGGACCAAATTCCGTTCTTGGAAGGGCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTCGAACCGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATATCCTGTGGCGTTATTGGGGTGCAAGAGTGATGATACACTTCGACTTGCATGGTCTGTAATGATTGATGAAGATGCAAAGCTGTATTTTAGTTTGGAACTTATATGTTGTAGTTAAAATAAGATAGCTTCGATCAAGCCTTGTATCATAA

Coding sequence (CDS)

ATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAAGGAGTCAGTGGAACTGTCCTCTTTAGCCAAAATGGCAGTGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACAAATGGTTGCTTATCAGCTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCCAGTGATGAGAATCGTCATGTTGGTGATCTTGGAAATTTGGTTGCCGGTGATGATGGTACTGCTACTTTCACTATTATTGACAAGCAGATTTCCCTCGTTGGACCAAATTCCGTTCTTGGAAGGGCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTCGAACCGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATATCCTGTGGCGTTATTGGGGTGCAAGAGTGA

Protein sequence

MVKAVAVLESNQGVSGTVLFSQNGSGLHGFHVHALGDTTNGCLSAGPHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHADPDDLGRGRTELSLTTGNAGERISCGVIGVQE

Homology

[Close]

BLAST of CcUC02G033550 vs. NCBI nr
Match: XP_004139207.1 (superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >KGN60844.1 hypothetical protein Csa_019273 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 126/152 (82.89%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNG--------------SGLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGVSG++ FSQNG              +GLHGFHVHALGDTTNGCLS G
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGN+VAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG TELSLTTGNAGERI CGVIG+QE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. NCBI nr
Match: KAG7030279.1 (Superoxide dismutase [Cu-Zn] 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 126/152 (82.89%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. NCBI nr
Match: XP_022999148.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 126/152 (82.89%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLIPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. NCBI nr
Match: XP_038890446.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 5.4e-63
Identity = 125/152 (82.24%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNG--------------SGLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESN+GVSGTV FSQN               +GLHGFHVHA GDTTNGCLS G
Sbjct: 1   MVKAVAVLESNRGVSGTVFFSQNDNGPTTVTGNISGLKAGLHGFHVHAFGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+I+DKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPHDENRHVGDLGNLVAGDDGTATFSIVDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. NCBI nr
Match: XP_022946180.1 (superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 125/152 (82.24%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVG NSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGTNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot
Match: P93258 (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.6e-56
Identity = 106/151 (70.20%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAV VL S++GVSGTV F+Q GS              GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNP GK+HGAP DE RH GDLGN+  GDDGTATFTIID QI L GPNS++GRA+VVHA
Sbjct: 61  PHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLGRG  ELS  TGNAG R++CGVIG+Q
Sbjct: 121 DPDDLGRGGHELSKATGNAGGRVACGVIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot
Match: Q43779 (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum OX=4081 GN=SODCC.5 PE=3 SV=3)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-54
Identity = 101/151 (66.89%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVL S++GVSGT+LF+Q+G+              GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PH+NP GK+HGAP DE RH GDLGN+  G+DGTA+FTI DKQI L GP S++GRA+VVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELS +TGNAG RI+CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot
Match: Q07796 (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-54
Identity = 101/151 (66.89%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVL S++GVSGT+ FSQ G               GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNP GK+HGAP D+NRH GDLGN+  G+DGTA+FTI DKQI L G NSV+GRA+VVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELS +TGNAG R++CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot
Match: P24704 (Superoxide dismutase [Cu-Zn] 1 OS=Arabidopsis thaliana OX=3702 GN=CSD1 PE=1 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 4.8e-54
Identity = 100/151 (66.23%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           M K VAVL S++GV+GT+ F+Q G               GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNP+GK HGAP D NRH GDLGN+  GDDGTATFTI D QI L GPNS++GRA+VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELSL TGNAG R++CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot
Match: P27082 (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 8.1e-54
Identity = 99/151 (65.56%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVL S++GVSGT+ F+Q+G               GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PH+NP GK+HGAP DE RH GDLGN+  G+DGTA+FT+ DKQI L GP S++GRA+VVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELS TTGNAG R++CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL
Match: A0A0A0LIH2 (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.3e-64
Identity = 126/152 (82.89%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNG--------------SGLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGVSG++ FSQNG              +GLHGFHVHALGDTTNGCLS G
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGN+VAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG TELSLTTGNAGERI CGVIG+QE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL
Match: A0A6J1KIS8 (Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=LOC111493618 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.9e-64
Identity = 126/152 (82.89%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLIPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL
Match: A0A6J1G334 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.8e-63
Identity = 125/152 (82.24%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVG NSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGTNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+CGVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL
Match: A0A1S3C1D1 (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.6e-63
Identity = 125/152 (82.24%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNG--------------SGLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGVSGT+ FSQNG              +GLHGFHVHALGDTTNGCLS G
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGN+VAGD+GTATF+IIDKQISLVG NSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQE 139
           DPDDLGRG TELSLTTGNAGERI CGVIG+QE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL
Match: A0A6J1KC95 (Superoxide dismutase OS=Cucurbita maxima OX=3661 GN=LOC111493618 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.8e-62
Identity = 126/156 (80.77%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           MVKAVAVLESNQGV GTV F+QNG+              GLHGFHVHALGDTTNGC S G
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLIPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGNLVAGDDGTATF+IIDKQISLVGPNSVLGR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISC----GVIGVQE 139
           DPDDLGRG+TELSLTTGNAGERI+C    GVIG+QE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACVFLAGVIGLQE 156

[Close]

BLAST of CcUC02G033550 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 100/151 (66.23%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           M K VAVL S++GV+GT+ F+Q G               GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNP+GK HGAP D NRH GDLGN+  GDDGTATFTI D QI L GPNS++GRA+VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELSL TGNAG R++CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 100/151 (66.23%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAG 60
           M K VAVL S++GV+GT+ F+Q G               GLHGFHVHALGDTTNGC+S G
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHA 120
           PHFNP+GK HGAP D NRH GDLGN+  GDDGTATFTI D QI L GPNS++GRA+VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           DPDDLG+G  ELSL TGNAG R++CG+IG+Q
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]

BLAST of CcUC02G033550 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-42
Identity = 86/148 (58.11%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 3   KAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAGPH 62
           KAVAVL+    V G V  +Q+ S              G HGFH+H  GDTTNGC+S GPH
Sbjct: 66  KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPH 125

Query: 63  FNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHADP 122
           FNP    HGAP DE RH GDLGN+ A  DG A  TI+D QI L GPNSV+GRA VVH   
Sbjct: 126 FNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELK 185

Query: 123 DDLGRGRTELSLTTGNAGERISCGVIGV 137
           DDLG+G  ELSLTTGNAG R++CGVIG+
Sbjct: 186 DDLGKGGHELSLTTGNAGGRLACGVIGL 213

[Close]

BLAST of CcUC02G033550 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-40
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 2   VKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAGP 61
           ++AVA++  +  V G + F Q+ S              G HGFH+H+ GDTTNGC+S GP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG +G A   I DK I L G  S+LGRA+VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRGRTELSLTTGNAGERISCGVIGVQ 138
           PDDLG+G  +LS +TGNAG R+ CG+IG+Q
Sbjct: 128 PDDLGKGGHKLSKSTGNAGSRVGCGIIGLQ 157

[Close]

BLAST of CcUC02G033550 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-32
Identity = 65/127 (51.18%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 2   VKAVAVLESNQGVSGTVLFSQNGS--------------GLHGFHVHALGDTTNGCLSAGP 61
           ++AVA++  +  V G + F Q+ S              G HGFH+H+ GDTTNGC+S GP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPSDENRHVGDLGNLVAGDDGTATFTIIDKQISLVGPNSVLGRAIVVHAD 115
           HFNP  + HG P++E RH GDLGN++AG +G A   I DK I L G  S+LGRA+VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

The following BLAST results are available for this feature:

BLAST of CcUC02G033550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139207.1	1.1e-63	82.89	superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dism...	[more]
KAG7030279.1	1.4e-63	82.89	Superoxide dismutase [Cu-Zn] 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999148.1	1.4e-63	82.89	superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima]	[more]
XP_038890446.1	5.4e-63	82.24	superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida]	[more]
XP_022946180.1	1.2e-62	82.24	superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CcUC02G033550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93258	6.6e-56	70.20	Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC...	[more]
Q43779	2.8e-54	66.89	Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum OX=4081 GN=SODCC.5 PE=3 S...	[more]
Q07796	2.8e-54	66.89	Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2	[more]
P24704	4.8e-54	66.23	Superoxide dismutase [Cu-Zn] 1 OS=Arabidopsis thaliana OX=3702 GN=CSD1 PE=1 SV=2	[more]
P27082	8.1e-54	65.56	Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ...	[more]

BLAST of CcUC02G033550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIH2	5.3e-64	82.89	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=...	[more]
A0A6J1KIS8	6.9e-64	82.89	Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=LOC111493618 PE=3 SV...	[more]
A0A6J1G334	5.8e-63	82.24	Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 ...	[more]
A0A1S3C1D1	7.6e-63	82.24	Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1	[more]
A0A6J1KC95	3.8e-62	80.77	Superoxide dismutase OS=Cucurbita maxima OX=3661 GN=LOC111493618 PE=3 SV=1	[more]

BLAST of CcUC02G033550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08830.1	3.4e-55	66.23	copper/zinc superoxide dismutase 1	[more]
AT1G08830.2	3.4e-55	66.23	copper/zinc superoxide dismutase 1	[more]
AT2G28190.1	4.3e-42	58.11	copper/zinc superoxide dismutase 2	[more]
AT5G18100.1	2.4e-40	52.00	copper/zinc superoxide dismutase 3	[more]
AT5G18100.2	9.0e-32	51.18	copper/zinc superoxide dismutase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 84..106 score: 58.4 coord: 29..51 score: 79.07 coord: 109..135 score: 65.29 coord: 65..74 score: 70.93
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 14..134 e-value: 5.9E-42 score: 143.1
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 2..131 e-value: 6.21776E-54 score: 164.356
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 1..138 e-value: 3.8E-55 score: 188.2
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 2..136
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 1..138
None	No IPR available	PANTHER	PTHR10003:SF84	SUPEROXIDE DISMUTASE [CU-ZN]	coord: 1..138
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00332	SOD_CU_ZN_2	coord: 123..134
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 29..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G033550.1	CcUC02G033550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0046872	metal ion binding