
CcUC02G033360 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGTCCCTACCAAATAAAATCCCAAGTAACCAAAAGAACCCAAACCACTCAATTTCTAATGGAACTAACACATCTTCACTCCCATTTTCCCTCTGTATTCCATGTCTCACCACATCTGAAACTCTTCATCTTCCCATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAACCCCAAACCTTCTTCTTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGACCAAATTTTGTTTCTCTCTCTAAGCCCATTTCCCTCTCCCTCAAAACCCCCTCTCCTCCAATCTCTCTCCGATCATCTCTCCCAGCTCCTTCCACTTGGCTCTCCCATCTCCAACATGGGCTGGCGGCCGTTGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGGCCACAACGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTGACTGTAAGTTCTTTTCAAATTCTAGATGGAGAAACTAAACTCTTGTGGGTCAGAAAAGTTGTTGGGTCTTGAATGTCCATTTTACTCTGCTGTCATCCAAATTGTAGAACCATTCTTGAAGAGTATCCTTCTACAGTGGAATGATTCTAATTTAGAGGAATTTGTTGATGAAGTTGGTGTATGTTTATGAAAATTTTAAAATATCTTTAAGATACATTATTAGAAAGTGGGCATCATTTTGTAATGTCTAGAAATACCTTCCATAGTCCTTGAAATATTTTTAAGTCAAATTTCAAAATAAAAATTATTTTCTTTAGTTTTAATAACTTTGACTTGATTTTTTCAAACATGATAGAAAGTAGATAACAAAAGGAAGAAGTTTATAGGTGGAACACGAAATTAGTGCTTATAAGTTCAATTTTTAAAACCCAAATAGTTTTTAAATGGGATTTTGATAATCCATGAAGGTTAGTTTTGGGTGGGGAAAGCCTCTTCAAAGAGTACCAAGGCAGGGGTAACGAGTGTAATGCAAGGAGTGAACCTATGATATACAAGAAAACGGGAGTATCTTGTTTGGTCTTTAGGGTTTTGAACTAATTTCTATTTGGTCTCTAAGTTTTAAAATGGTATAGATTTAGTTAATTTTGAGTTTGGTTTCAATTTAGTCCCTTGGTTTCAAACTATTACAATTTTATCCTTTATATTTGAGTTTTGGTAAAATTTAGTTCCTAGATTTGAAGGTTTACCCGCTTAACCTCAATTTTTTTGCACAAAATACCCACATATCAATCTTTAGTGTTAACTATATTTTGATAAATTTAAAATTAAAATAATTCTAATTAATTAAATTTTACTATTTTTCATAAATTTTAAAATTAAATTTGAAAATTTTATTTCATAATTATTTTAAATTAATTAAGAGACATTAATGTCAATGATTTGGAAGTGAGTGTTTCATGAAAATATTGAGGTTAAAAATTTAAAATCGAGAAACCTAGGGAACAAATTGAAACAAAATTCAAATCTCAAGGTAAGATTTCTAACCTTTTGAAATTTAGGGACTAAATTGAAACCAAACTCAAGACTTAAAAGACTAAAAATGTATGATATTTTGAAACCTAAGGACTAAATTTAAAATCTAAGAACAGTATTGTTTCCTTAAAAAAATAAATGAAAAGGGAAATGTATGAAATCTGATATGAACTTATAAACTGGTGGGTGTAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAAAAAGAAGGCGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAATCTCCCAGGTAAACTAACTTCCACTTATCTCACTCTTCACTGTCATCAACATTGAACACAACTCCCACTAAAAGCTGCTAGTGCAATTTCATCAGCCTCTTCACCCAACAAGTTCTACTATCTCTTGCTAAACTTAAATTGTAACACATGGCAACTAGTAGATGCCTTAAATGCACTCGTATCTTGTCTTGATTGTCTGTGTTTGATGCGAGTCGCCCTTGTTTATAAGTTTTATCAATTTCGGAAGAAAAGATAACCACAAACGATCTTGTATCTTAGCGAGTTGTCAATATCCTTCTCAGCTAGTAGTTGTTACTTTATTGTTTTTCAGACTGCAACTGACTAAGATTGTTTCTTATGTACCTGCAGTCTTAGCTACTGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCGGATCCGGGTGGTCCTTCATTTAAGGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTTCTCTCGTAGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAGGAAGTAACAGAAATATGTAAGAGGCAGATCTTCCCATCTATGTCCTTCACATTCAAATGTGTAACATTGATGTTGTACAAAGAGAACCGCTACAAGAAGATTTGCAAGAAACCTGTTATAAAACAAGAGTTTGGGTTTTTTTTTTTCCTGTCTCCCCTTTCTCTTTCT ATTTGTCCCTACCAAATAAAATCCCAAGTAACCAAAAGAACCCAAACCACTCAATTTCTAATGGAACTAACACATCTTCACTCCCATTTTCCCTCTGTATTCCATGTCTCACCACATCTGAAACTCTTCATCTTCCCATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAACCCCAAACCTTCTTCTTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGACCAAATTTTGTTTCTCTCTCTAAGCCCATTTCCCTCTCCCTCAAAACCCCCTCTCCTCCAATCTCTCTCCGATCATCTCTCCCAGCTCCTTCCACTTGGCTCTCCCATCTCCAACATGGGCTGGCGGCCGTTGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGGCCACAACGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTGACTTGGAATGATTCTAATTTAGAGGAATTTGTTGATGAAGTTGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAAAAAGAAGGCGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAATCTCCCAGTCTTAGCTACTGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCGGATCCGGGTGGTCCTTCATTTAAGGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTTCTCTCGTAGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAGGAAGTAACAGAAATATGTAAGAGGCAGATCTTCCCATCTATGTCCTTCACATTCAAATGTGTAACATTGATGTTGTACAAAGAGAACCGCTACAAGAAGATTTGCAAGAAACCTGTTATAAAACAAGAGTTTGGGTTTTTTTTTTTCCTGTCTCCCCTTTCTCTTTCT ATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAACCCCAAACCTTCTTCTTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGACCAAATTTTGTTTCTCTCTCTAAGCCCATTTCCCTCTCCCTCAAAACCCCCTCTCCTCCAATCTCTCTCCGATCATCTCTCCCAGCTCCTTCCACTTGGCTCTCCCATCTCCAACATGGGCTGGCGGCCGTTGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGGCCACAACGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTGACTTGGAATGATTCTAATTTAGAGGAATTTGTTGATGAAGTTGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAAAAAGAAGGCGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAATCTCCCAGTCTTAGCTACTGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCGGATCCGGGTGGTCCTTCATTTAAGGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTTCTCTCGTAGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAGGAAGTAA METILSPHSLSPLLNPKPSSSSKNLFPYSFQPRPNFVSLSKPISLSLKTPSPPISLRSSLPAPSTWLSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKESHVVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTWNDSNLEEFVDEVVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK Homology
BLAST of CcUC02G033360 vs. NCBI nr
Match: XP_008455096.1 (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo] >KAA0063677.1 UPF0603 protein [Cucumis melo var. makuwa] >TYK18350.1 UPF0603 protein [Cucumis melo var. makuwa]) HSP 1 Score: 518.1 bits (1333), Expect = 5.1e-143 Identity = 276/299 (92.31%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of CcUC02G033360 vs. NCBI nr
Match: KAE8651583.1 (hypothetical protein Csa_023423 [Cucumis sativus]) HSP 1 Score: 513.8 bits (1322), Expect = 9.7e-142 Identity = 270/311 (86.82%), Postives = 282/311 (90.68%), Query Frame = 0
BLAST of CcUC02G033360 vs. NCBI nr
Match: XP_022946287.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1 UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 503.4 bits (1295), Expect = 1.3e-138 Identity = 268/299 (89.63%), Postives = 280/299 (93.65%), Query Frame = 0
BLAST of CcUC02G033360 vs. NCBI nr
Match: XP_022999120.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 501.5 bits (1290), Expect = 5.0e-138 Identity = 268/302 (88.74%), Postives = 280/302 (92.72%), Query Frame = 0
BLAST of CcUC02G033360 vs. NCBI nr
Match: XP_004139197.1 (UPF0603 protein At1g54780, chloroplastic [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.9e-137 Identity = 263/299 (87.96%), Postives = 278/299 (92.98%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy Swiss-Prot
Match: Q9ZVL6 (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.1e-103 Identity = 205/299 (68.56%), Postives = 245/299 (81.94%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy Swiss-Prot
Match: A2Y4G9 (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2) HSP 1 Score: 358.6 bits (919), Expect = 6.8e-98 Identity = 198/306 (64.71%), Postives = 240/306 (78.43%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy Swiss-Prot
Match: Q6ATY4 (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 6.8e-98 Identity = 198/306 (64.71%), Postives = 240/306 (78.43%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy TrEMBL
Match: A0A5D3D492 (UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00650 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143 Identity = 276/299 (92.31%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy TrEMBL
Match: A0A1S3C0U8 (UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143 Identity = 276/299 (92.31%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy TrEMBL
Match: A0A6J1G3B4 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450415 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 6.3e-139 Identity = 268/299 (89.63%), Postives = 280/299 (93.65%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy TrEMBL
Match: A0A6J1KEE9 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493599 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.4e-138 Identity = 268/302 (88.74%), Postives = 280/302 (92.72%), Query Frame = 0
BLAST of CcUC02G033360 vs. ExPASy TrEMBL
Match: A0A0A0LGA5 (TPM_phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020910 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 9.1e-138 Identity = 263/299 (87.96%), Postives = 278/299 (92.98%), Query Frame = 0
BLAST of CcUC02G033360 vs. TAIR 10
Match: AT1G54780.1 (thylakoid lumen 18.3 kDa protein ) HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104 Identity = 205/299 (68.56%), Postives = 245/299 (81.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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