CcUC02G031620 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G031620
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Leucine aminopeptidase 2
Location	CicolChr02: 27376345 .. 27377542 (-)
RNA-Seq Expression	CcUC02G031620
Synteny	CcUC02G031620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTTCTTCATTGAAAATTCTTGCAGAAAGAACATCATTGTATTTTTGGGTAATCTTTAAGACCTCAGCTGCCAATGCCCCTAATCATATGGATGTAATTTCTCAAAGTCAGTACCATGTATGGTTACAAGCCATGACATGCTATATCAAGTTGAAACTTAATATCCATCAGCAAGAAAGTAAATGACAGATAAAAATAAAACATAAAAAGGAGCAAACCTGGTGTAAGTATATTTGCAGGTGAATTTACAAGTTCTCTTACAAACACAATCCCGGAACTGACATTTTGTGCATATTTCAGCTTTTTGTCCATATCAGGTCCAGATCCAAGACCAAGAACATCCACAGATTGAAGTACAGTCATTTTGGGGTCTGATCTATATCTGTTGTCGTCAAATATCCCAATGACAATCCCTATGATGCAGAGAAAATTTAGTGTCAAATAGGACATAAACGAACTATACAGTTAGGAAGTATGGAGTTAATATGTTGAAGTTAAGAAGACTCTGTCTAGAGTGCAGGGTTGTAAGATGAAATTTTTCGATAAAGATGCAAAATAGAGAAAGAGGGGAAGATGGAGTTCTTCGATAAATGTGCAAACTTCAATAGTAAACACTATCATTGAAGTTGAGTTATTTAACACTAATTTATGAGATTGGTAGACCAAACACCCTGAGTACTCAAGTACTAAGGTGTGTTTGTAGCTACTTTTCAATAGCAGTTTTGAGTAAGTACATAGTTTAAAGATTATAGAACATGTACCAAGTGCAATGGCCGAGGCAATTTCAGGCTTTGATTCATCCGAAAGGTCCTCTGAGAAGGCAAGAGCTACAGCAACTGAAATGGCTCGAGATGCATTTGCAGCTGCTGCAATGGCCTCACCTAGACCAACAAAGGCTGCTGCAGTAGAAGCTGATTGGCCAAGTCCAAATAAACCAACCCTCTTAAAGCTCAAGCCAGAAACTCTTAGAACAACAGATTGGCCAGACTTTCCAGAGAAATCTTCCTCTGAAGAAGCTTCAGCCAACAATCCACCCAAGCTTGCATCCAACTTGCGCAAAAGTGGATTCTTGAAGTTGGAGTTTTCATCTCTGACCACATCTTTCTCTGTGACACCCACAGCAAGCAAGTCTCCATTCCATTCCAAGACATCAATGTCTTTTGCAGCAAAAGTTATCTTTGAGACATTTTAA

mRNA sequence

ATGATTTCTTCTTCATTGAAAATTCTTGCAGAAAGAACATCATTGTATTTTTGGGTAATCTTTAAGACCTCAGCTGCCAATGCCCCTAATCATATGGATGTAATTTCTCAAAGTCAGTACCATGTATGGTTACAAGCCATGACATGCTATATCAAGTTGAAACTTAATATCCATCAGCAAGAAACTTTTTGTCCATATCAGGTCCAGATCCAAGACCAAGAACATCCACAGATTGAAGTACAGTCATTTTGGGAACATGTACCAAGTGCAATGGCCGAGGCAATTTCAGGCTTTGATTCATCCGAAAGGTCCTCTGAGAAGGCAAGAGCTACAGCAACTGAAATGGCTCGAGATGCATTTGCAGCTGCTGCAATGGCCTCACCTAGACCAACAAAGGCTGCTGCAGTAGAAGCTGATTGGCCAAGTCCAAATAAACCAACCCTCTTAAAGCTCAAGCCAGAAACTCTTAGAACAACAGATTGGCCAGACTTTCCAGAGAAATCTTCCTCTGAAGAAGCTTCAGCCAACAATCCACCCAAGCTTGCATCCAACTTGCGCAAAAGTGGATTCTTGAAGTTGGAGTTTTCATCTCTGACCACATCTTTCTCTGTGACACCCACAGCAAGCAAGTCTCCATTCCATTCCAAGACATCAATGTCTTTTGCAGCAAAAGTTATCTTTGAGACATTTTAA

Coding sequence (CDS)

ATGATTTCTTCTTCATTGAAAATTCTTGCAGAAAGAACATCATTGTATTTTTGGGTAATCTTTAAGACCTCAGCTGCCAATGCCCCTAATCATATGGATGTAATTTCTCAAAGTCAGTACCATGTATGGTTACAAGCCATGACATGCTATATCAAGTTGAAACTTAATATCCATCAGCAAGAAACTTTTTGTCCATATCAGGTCCAGATCCAAGACCAAGAACATCCACAGATTGAAGTACAGTCATTTTGGGAACATGTACCAAGTGCAATGGCCGAGGCAATTTCAGGCTTTGATTCATCCGAAAGGTCCTCTGAGAAGGCAAGAGCTACAGCAACTGAAATGGCTCGAGATGCATTTGCAGCTGCTGCAATGGCCTCACCTAGACCAACAAAGGCTGCTGCAGTAGAAGCTGATTGGCCAAGTCCAAATAAACCAACCCTCTTAAAGCTCAAGCCAGAAACTCTTAGAACAACAGATTGGCCAGACTTTCCAGAGAAATCTTCCTCTGAAGAAGCTTCAGCCAACAATCCACCCAAGCTTGCATCCAACTTGCGCAAAAGTGGATTCTTGAAGTTGGAGTTTTCATCTCTGACCACATCTTTCTCTGTGACACCCACAGCAAGCAAGTCTCCATTCCATTCCAAGACATCAATGTCTTTTGCAGCAAAAGTTATCTTTGAGACATTTTAA

Protein sequence

MISSSLKILAERTSLYFWVIFKTSAANAPNHMDVISQSQYHVWLQAMTCYIKLKLNIHQQETFCPYQVQIQDQEHPQIEVQSFWEHVPSAMAEAISGFDSSERSSEKARATATEMARDAFAAAAMASPRPTKAAAVEADWPSPNKPTLLKLKPETLRTTDWPDFPEKSSSEEASANNPPKLASNLRKSGFLKLEFSSLTTSFSVTPTASKSPFHSKTSMSFAAKVIFETF

Homology

[Close]

BLAST of CcUC02G031620 vs. NCBI nr
Match: KAA0039629.1 (leucine aminopeptidase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-50
Identity = 119/140 (85.00%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 91  MAEAISGFDSSERSSEKARATATEMARDAFAAAAMASPRPTKAAAVEADWPSPNKPTLLK 150
           M EA++GF SSERS+EKARA ATE ARDA AAAAMASPRPTKAAA EADWPS NKPTLLK
Sbjct: 1   MDEAMAGFHSSERSAEKARAKATETARDACAAAAMASPRPTKAAAREADWPSANKPTLLK 60

Query: 151 LKPETLRTTDWPDFPEKSSSEEASANNPPKLASNLRKSGFLKLEFSSLTTSFSVTPTASK 210
           LKPETLRT  WPDFPEKSSSEEASANNPPK ASN  KSG +KL  SSLTTSFSVTPTASK
Sbjct: 61  LKPETLRTIAWPDFPEKSSSEEASANNPPKSASNFCKSGLVKLLLSSLTTSFSVTPTASK 120

Query: 211 SPFHSKTSMSFAAKVIFETF 231
           SPFHSKTS+SFAAKVIF TF
Sbjct: 121 SPFHSKTSVSFAAKVIFGTF 140

[Close]

BLAST of CcUC02G031620 vs. NCBI nr
Match: KAF6162485.1 (hypothetical protein GIB67_026323, partial [Kingdonia uniflora])

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-06
Identity = 44/79 (55.70%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 120 FAAAAMASPRPTKAAAVEADWPSPNKPTLLKLKPETLRTTDWPDFPEKSSSEEASANNPP 179
           FAAAA ASPR    A    D+PSP  PTL    P TLR  D P FP KSSS E S N PP
Sbjct: 6   FAAAATASPRLLYPA---GDFPSPINPTLFDPNPGTLRIVDCPAFPVKSSSTETSPNKPP 65

Query: 180 KLASNLRKSGFLKLEFSSL 199
           K  SN     FLK+EFS+L
Sbjct: 66  KCVSN-----FLKIEFSNL 76

[Close]

BLAST of CcUC02G031620 vs. ExPASy TrEMBL
Match: A0A5A7TEH5 (Leucine aminopeptidase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G001090 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.5e-51
Identity = 119/140 (85.00%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 91  MAEAISGFDSSERSSEKARATATEMARDAFAAAAMASPRPTKAAAVEADWPSPNKPTLLK 150
           M EA++GF SSERS+EKARA ATE ARDA AAAAMASPRPTKAAA EADWPS NKPTLLK
Sbjct: 1   MDEAMAGFHSSERSAEKARAKATETARDACAAAAMASPRPTKAAAREADWPSANKPTLLK 60

Query: 151 LKPETLRTTDWPDFPEKSSSEEASANNPPKLASNLRKSGFLKLEFSSLTTSFSVTPTASK 210
           LKPETLRT  WPDFPEKSSSEEASANNPPK ASN  KSG +KL  SSLTTSFSVTPTASK
Sbjct: 61  LKPETLRTIAWPDFPEKSSSEEASANNPPKSASNFCKSGLVKLLLSSLTTSFSVTPTASK 120

Query: 211 SPFHSKTSMSFAAKVIFETF 231
           SPFHSKTS+SFAAKVIF TF
Sbjct: 121 SPFHSKTSVSFAAKVIFGTF 140

[Close]

BLAST of CcUC02G031620 vs. ExPASy TrEMBL
Match: A0A7J7N5Q0 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_026323 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.5e-07
Identity = 44/79 (55.70%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 120 FAAAAMASPRPTKAAAVEADWPSPNKPTLLKLKPETLRTTDWPDFPEKSSSEEASANNPP 179
           FAAAA ASPR    A    D+PSP  PTL    P TLR  D P FP KSSS E S N PP
Sbjct: 6   FAAAATASPRLLYPA---GDFPSPINPTLFDPNPGTLRIVDCPAFPVKSSSTETSPNKPP 65

Query: 180 KLASNLRKSGFLKLEFSSL 199
           K  SN     FLK+EFS+L
Sbjct: 66  KCVSN-----FLKIEFSNL 76

The following BLAST results are available for this feature:

BLAST of CcUC02G031620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039629.1	1.3e-50	85.00	leucine aminopeptidase 2 [Cucumis melo var. makuwa]	[more]
KAF6162485.1	1.6e-06	55.70	hypothetical protein GIB67_026323, partial [Kingdonia uniflora]	[more]

BLAST of CcUC02G031620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G031620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEH5	6.5e-51	85.00	Leucine aminopeptidase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A7J7N5Q0	7.5e-07	55.70	Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_026323 PE=4 SV=1	[more]

BLAST of CcUC02G031620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G031620.1	CcUC02G031620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0070006	metalloaminopeptidase activity