CcUC02G030780 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G030780
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr02: 26243354 .. 26245490 (-)
RNA-Seq ExpressionCcUC02G030780
SyntenyCcUC02G030780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAATCGAGGAACAAAACTATAACAGTGATGTCGTCGTGAAAATGCCTCCTTACCCCGCGGTCAATCTTCTTCAAGTCTGTGTATCTCATTTCTCTTTTTTTTGCAGCTTCATGAAGGGCGGCTTTAACGAGTTTCCTAGCAACCCCCTGTAAGTTAGTCATGGAAATGGCATAAGAGTCTTTTTTTTCTTTTTTTTTTTTTTTGTTAAATTTACATGTTTCATCATTTACAATATCAATATTGAACAAGTCAAAGGACATATTAGACACACCATCCAATATTTAGTGACCTATTGAACATAAAATTGAAAATTTAAAGACTTATAAGAACTTTTTAAATAAAGAATTCGGACCCAGGCCTATTTAGGATTCAAATAGACATATACCAACCTTCAAGAACCGAATTTGTAATTTAAAGTAGTGGCATATTGTCCCTACTTTTTAAACATTCTCCCTTTTCTCTCTCTCTCTTCTCTTCTTTTCTTTCTTTCTTTTTTTTCTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGTGTCAAAATGTCATCGAATGTACACTATATTCGTATTCTATAACAGAAAGGAATGACATATTCTACATGGAGAGAAATTGAAGAAAAATTGATACAAGAAAGTTAAGTAAATAGAAAACAAGGTAACAACCAAAAAAGGGAATCAAGAGCGATTATAGAGTCAAAATCAATTTTCTTGTAACCAAAAGAAAAGGGAGAATCACAGAAAGTCAAAAGGAGGCATCAGAGTGAACATCAGACCAAACTTCCTTCCAAGACTTCAGCCATTGGTATGATTGCTCCGATAGCTTGCCAATGGCAAGAAATCCTTTCCCACAGAGGGAGGCTGTACTTCTAAGCAAACGGAAGTGCCTAGCAAAGATAGAGCAAAAGAAGAAAAGAAAACTTAAACAGAAATCATACGTTACGTGGACAACTATGGACGATGTCGACAGCTTCCTGATTGCTTATATACTCCCAAAGACCATCTGAAGCAAATATAAGAAACTGATCCTCTGGGTACAGTTTCTGCACTACAATAGCAGGCTCGGCTTTAAGTATTGGCTTGTGGAATGGTTCTGGTAGTCTGAACTTCGGCAAAAGAGGCTCTTGGTTGAACTCTGTTTTCTTTAGATAAGCATCACCAAGGGATCTTGAGACCTACACATGAACAGCTACATCAGTAGAGTGAAACTTTCTAGTTTATAACCAATTGTTCAGCTACATTGGAAATGTTCTTTTTTCAATTTTCCTTTCTTATTCTGTCAAAGGGGTTCAAGAACAAACCTGTATAACGCCCTTCACGCGCCACACCTTGTGCTTTAGCACCACAATCTGTGGATCATTGGGATGCAACGAGTGCAGCTCCTCTCTCACAGATTCAATACTAGCATTGTGCTCAGATGACAATTGGATGGCTTTAACCTCTTTATGA

mRNA sequence

ATGCGAATCGAGGAACAAAACTATAACAGTGATGTCGTCGTGAAAATGCCTCCTTACCCCGCGGTCAATCTTCTTCAAGTCTGTGTATCTCATTTCTCTTTTTTTTGCAGCTTCATGAAGGGCGGCTTTAACGAGTTTCCTAGCAACCCCCTCTTGCCAATGGCAAGAAATCCTTTCCCACAGAGGGAGGCTGTACTTCTAAGCAAACGGAAGTGCCTAGCAAAGATAGAGCAAAAGAAGAAAAGAAAACTTAAACAGAAATCATACGTTACGTGGACAACTATGGACGATTTTCTGCACTACAATAGCAGGCTCGGCTTTAAGTATTGGCTTGTGGAATGGTTCTGCTACATTGGAAATGTTCTTTTTTCAATTTTCCTTTCTTATTCTGTCAAAGGGGTTCAAGAACAAACCTGTATAACGCCCTTCACGCGCCACACCTTGTGCTTTAGCACCACAATCTGTGGATCATTGGGATGCAACGAGTGCAGCTCCTCTCTCACAGATTCAATACTAGCATTGTGCTCAGATGACAATTGGATGGCTTTAACCTCTTTATGA

Coding sequence (CDS)

ATGCGAATCGAGGAACAAAACTATAACAGTGATGTCGTCGTGAAAATGCCTCCTTACCCCGCGGTCAATCTTCTTCAAGTCTGTGTATCTCATTTCTCTTTTTTTTGCAGCTTCATGAAGGGCGGCTTTAACGAGTTTCCTAGCAACCCCCTCTTGCCAATGGCAAGAAATCCTTTCCCACAGAGGGAGGCTGTACTTCTAAGCAAACGGAAGTGCCTAGCAAAGATAGAGCAAAAGAAGAAAAGAAAACTTAAACAGAAATCATACGTTACGTGGACAACTATGGACGATTTTCTGCACTACAATAGCAGGCTCGGCTTTAAGTATTGGCTTGTGGAATGGTTCTGCTACATTGGAAATGTTCTTTTTTCAATTTTCCTTTCTTATTCTGTCAAAGGGGTTCAAGAACAAACCTGTATAACGCCCTTCACGCGCCACACCTTGTGCTTTAGCACCACAATCTGTGGATCATTGGGATGCAACGAGTGCAGCTCCTCTCTCACAGATTCAATACTAGCATTGTGCTCAGATGACAATTGGATGGCTTTAACCTCTTTATGA

Protein sequence

MRIEEQNYNSDVVVKMPPYPAVNLLQVCVSHFSFFCSFMKGGFNEFPSNPLLPMARNPFPQREAVLLSKRKCLAKIEQKKKRKLKQKSYVTWTTMDDFLHYNSRLGFKYWLVEWFCYIGNVLFSIFLSYSVKGVQEQTCITPFTRHTLCFSTTICGSLGCNECSSSLTDSILALCSDDNWMALTSL
Homology
[Close]
BLAST of CcUC02G030780 vs. ExPASy TrEMBL
Match: A0A2P2LB07 (Uncharacterized protein MANES_02G109800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 137 QTCITPFTRHTLCFSTTICGSLGCNECSSSLTDSILALCSDDNWMALTS 186
           +TCI+PFTR TLCF TTIC S GC E  S  TDS+  LCSD++W+A TS
Sbjct: 7   ETCISPFTRQTLCFRTTICESSGCKENISCRTDSMATLCSDESWIARTS 55

The following BLAST results are available for this feature:
BLAST of CcUC02G030780 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC02G030780 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC02G030780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P2LB072.1e-0763.27Uncharacterized protein MANES_02G109800 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
BLAST of CcUC02G030780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G030780.1CcUC02G030780.1mRNA