CcUC02G030730 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G030730
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	serine/arginine-rich splicing factor RS2Z32-like isoform X2
Location	CicolChr02: 26199554 .. 26202351 (+)
RNA-Seq Expression	CcUC02G030730
Synteny	CcUC02G030730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAAAAAGAAATGAATATAAGATGGTATGGAGCGGCTTACGGAAATCAATTTTGCGAAAGACGTGAAATTTAGGGTTTCATATCCTTATTGTTTTCAGGTGCGCCTCGCCTCCTCCTTCGAATTTTCTAGGTTTTCTCTCCTCGATTCCTCCGACTCCATATTCATAGCGTTCTTCTATTGAATTTTTAGCTCAATCAAGGTTCTTGTTGTCTCTAACTTGATTATTAAAGAAATTTCTTAGCTTTTTCTCTTCGATTTCTCAAATAGTTGAATCGTATTTATGTTCATTTGTTTCGACGTATTTTGTTTTGAATACCTGCTCAAGTAATTGTCTTTTTGAATACTGTCGCCGATTGGGGTACTGTGGTTGTTGATTTTAGATAAAATGCCTCGATATGATGATCGTTATGGTGGTACTCGGCTCTACGTTGGGCGCCTTTCTTCACGGACGAGGTCCCGTGATCTTGATGACCTGTTCAGTCGTTATGGAAGGTATGTAGATTATTGCTGGGTGTACTATTCAACCATGGTCGAATTTGTGTGCTAACATTAATTTGATGAATTCGGAAAGTTCGTGTGTGTTTAGTTATGCCGTATGTTCTTCCTGTTGTCCCGGTTTTTCTATTGCTAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCTTGAGGTATTTGCCAAGCCCTATTTTGGGTACACAACTGTAAATGTGTATTTTGTTATATCCATGAAAGTGTGGAATTGTTGATGGGTCTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCCTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGATACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGTATGTATTTCCCTCCCTATACTTCTTTCATTTTTATTCAAGCTATACTTGGGAGGAAAAAAATGCTATATGTTGGCATCCTTTTTCTGTACTTAATGGTGCATGTTAAGTTTTGCAAGTGTGATCTTTTTCTTGGTCTATCTGCTTAAACATCTGATAACAGGAGTTTAGTGATCCCCGTGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGTATCATTGTGGAAATTGCTAAAGGGGTATGTATCATAATCTTTCCTGACAAAAGCCTTTTATAAACTGTTCAATTTCTTTCAGACAGTTGCCTCTGCTTTTCCAGGCTAGTTATCATTTTTATCTTTTAAGTGGTCAACTATGTCTCCCGTCTATGGTGGATTCATATCTTTTATGTGATTTTGAATTATTATTTTGGTACTTGGAACTTGGAAGATATCCTTCATCATGTTCGTGTACAATTTTACTCTTTTCATTGTCACATTTGTTCATTTTTATAAAGGCTTTGTGTAGTTTTCCTGGCTTGTGCAGGTAAGTTAAAGCTTGTTCATATCTTTTATATTCATTTATGAACTTTTTTTTTTGAATGTAATGGAATTTTACAATTTTGATTTAGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTCGGTCGAGGCCCTCCTGGAACTGGCCGTTGTTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTACCGATGTGGCGAAAGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCTAAGAAATTGAAGTATGTCATCTTTTCAATTGTTTTTTATCTTCCCTTTTAATTTTGCCTGTTGATCATTCTGAAAAATGAATTGTATGGCACAGGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCACAGTCGTAGTTACAGCAGAGGTCGTAGCTACAGGTATGTCTCAATTGAACCATCTTCATTTAGTCTGGTTGAAGTTTTCATCTTTCTCGAGTTTGTTGATTATGTATTGACTTAAGGTTTTATAACTTCCTGAGCATTTGTGTATTGTGTCCACAGCCGATCTAGATCGCCCGTAAAAAGAGAGAGAAGCCTCGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCGCCACCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCGGAAGAAGCAAGACGTAGTCTCTCCCCTGGAAATCGCGACAGTCCTAGAGGCAGAAGCAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCGATGGATGAAGGTGAGGACTTCAGTGGTGGTGGAAGTAGAAATTACCGAAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGCGGCAGCGAGTCTGCATAATAGACAGTTCCTTATTTTGCTTCTGCTTAAACACATGAGTTTGCGTTGGAATTTATAAGCGACTTGTCCCTCAAGAGAGACTTTTAAAATAGATCTGTATTGTGATTGAATCCCGCCTCAAATGTTCATCAGCACCGTATTTTGTCCATTTATCTCCCAGCTTAATTATGATAAATTATATATAATAATCCCTTTCTTATTAGCTGTTATATTCTATGTTTG

mRNA sequence

TTAGAAAAAGAAATGAATATAAGATGGTATGGAGCGGCTTACGGAAATCAATTTTGCGAAAGACGTGAAATTTAGGGTTTCATATCCTTATTGTTTTCAGGTGCGCCTCGCCTCCTCCTTCGAATTTTCTAGGTTTTCTCTCCTCGATTCCTCCGACTCCATATTCATAGCGTTCTTCTATTGAATTTTTAGCTCAATCAAGATAAAATGCCTCGATATGATGATCGTTATGGTGGTACTCGGCTCTACGTTGGGCGCCTTTCTTCACGGACGAGGTCCCGTGATCTTGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGTATCATTGTGGAAATTGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTCGGTCGAGGCCCTCCTGGAACTGGCCGTTGTTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTACCGATGTGGCGAAAGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCTAAGAAATTGAAGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCACAGTCGTAGTTACAGCAGAGGTCGTAGCTACAGCCGATCTAGATCGCCCGTAAAAAGAGAGAGAAGCCTCGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCGCCACCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCGGAAGAAGCAAGACGTAGTCTCTCCCCTGGAAATCGCGACAGTCCTAGAGGCAGAAGCAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCGATGGATGAAGGTGAGGACTTCAGTGGTGGTGGAAGTAGAAATTACCGAAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGCGGCAGCGAGTCTGCATAATAGACAGTTCCTTATTTTGCTTCTGCTTAAACACATGAGTTTGCGTTGGAATTTATAAGCGACTTGTCCCTCAAGAGAGACTTTTAAAATAGATCTGTATTGTGATTGAATCCCGCCTCAAATGTTCATCAGCACCGTATTTTGTCCATTTATCTCCCAGCTTAATTATGATAAATTATATATAATAATCCCTTTCTTATTAGCTGTTATATTCTATGTTTG

Coding sequence (CDS)

ATGCCTCGATATGATGATCGTTATGGTGGTACTCGGCTCTACGTTGGGCGCCTTTCTTCACGGACGAGGTCCCGTGATCTTGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGTATCATTGTGGAAATTGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTCGGTCGAGGCCCTCCTGGAACTGGCCGTTGTTTCAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGACTGGAAAAATAAATGTTACCGATGTGGCGAAAGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCTAAGAAATTGAAGCGTGGAAGTTACTCACGTTCACCAAGCCCTCGCCGTGGTAGAAGCCACAGTCGTAGTTACAGCAGAGGTCGTAGCTACAGCCGATCTAGATCGCCCGTAAAAAGAGAGAGAAGCCTCGAACGATCAGATAAAAGATCAAGGAGCCCAAGAGGCAGACCAAGCCCAAAGAGGCACAGTTTGTCGCCACCTCCTTCAAAAGCTATGAAACGTAGCCCCACTCCTGATGAGAGGAGTCCGGAAGAAGCAAGACGTAGTCTCTCCCCTGGAAATCGCGACAGTCCTAGAGGCAGAAGCAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCGATGGATGAAGGTGAGGACTTCAGTGGTGGTGGAAGTAGAAATTACCGAAGGGAAGAAAATGGCTACAGTCGCAGCCCCAGTCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGCGGCAGCGAGTCTGCATAA

Protein sequence

MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGNRDSPRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA

Homology

[Close]

BLAST of CcUC02G030730 vs. NCBI nr
Match: XP_038892927.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] >XP_038892928.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida])

HSP 1 Score: 578.2 bits (1489), Expect = 4.3e-161
Identity = 302/309 (97.73%), Postives = 302/309 (97.73%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGNRDSP 240
           RERSLERSDKRSRSPRGR SPKRHSLSPPP K MKRSPTPDERSPEEARRSLSPGNRDSP
Sbjct: 181 RERSLERSDKRSRSPRGRSSPKRHSLSPPP-KTMKRSPTPDERSPEEARRSLSPGNRDSP 240

Query: 241 RGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300
           RG  RSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDED NG
Sbjct: 241 RG--RSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDQNG 300

Query: 301 SPRGGSESA 310
           SPRGGSESA
Sbjct: 301 SPRGGSESA 306

[Close]

BLAST of CcUC02G030730 vs. NCBI nr
Match: XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])

HSP 1 Score: 572.4 bits (1474), Expect = 2.4e-159
Identity = 300/310 (96.77%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPGNRDS 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSPGNRDS
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 PRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300
              R RSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

Query: 301 GSPRGGSESA 310
           GSPRGGSESA
Sbjct: 301 GSPRGGSESA 309

[Close]

BLAST of CcUC02G030730 vs. NCBI nr
Match: XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])

HSP 1 Score: 570.9 bits (1470), Expect = 6.9e-159
Identity = 299/309 (96.76%), Postives = 301/309 (97.41%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPGNRDS 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSPGNRDS
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 PRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300
              R RSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

Query: 301 GSPRGGSES 309
           GSPRGGSES
Sbjct: 301 GSPRGGSES 308

[Close]

BLAST of CcUC02G030730 vs. NCBI nr
Match: KAG6601030.1 (Serine/arginine-rich splicing factor RS2Z32, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.0 bits (1447), Expect = 3.2e-156
Identity = 303/353 (85.84%), Postives = 304/353 (86.12%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 45  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 104

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDV GSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 105 RYSLNGRDVQGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 164

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 165 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 224

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGNRD-- 240
           RERSLERSDKRSRSPRGR SPKRHSLSPPPSKAMKRSPTPDERSPEEAR SLSPGNRD  
Sbjct: 225 RERSLERSDKRSRSPRGRSSPKRHSLSPPPSKAMKRSPTPDERSPEEARHSLSPGNRDSP 284

Query: 241 -------SPRGRSRSRSPRG-----------------------------------RSRSP 300
                  SPRGRSRSRSPRG                                   RSRSP
Sbjct: 285 RGGRSSRSPRGRSRSRSPRGRSMSPRGRSRSPRGRSRSPIDRSRSPIDRSRSPIDRSRSP 344

Query: 301 MDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA 310
           MDEGEDF+GGGSRNYRREENGYSRSPSPLPREE SPVNDEDNNGSPRGGSESA
Sbjct: 345 MDEGEDFNGGGSRNYRREENGYSRSPSPLPREEASPVNDEDNNGSPRGGSESA 397

[Close]

BLAST of CcUC02G030730 vs. NCBI nr
Match: XP_022942535.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata] >XP_022942536.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155
Identity = 299/326 (91.72%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSDKRSRSPR-GRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGN 240
           PVKR+RSLERS+KRSRSPR GR SPKRHSLSPPPSKAMKRSPTPD RSPEEARRS SPGN
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSPSPGN 240

Query: 241 RDSPRG-------------RSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPS 300
           RDSPRG             RSRSRSPRGRSRSPMDE EDF+GGGSRNYR+EENGYSRSPS
Sbjct: 241 RDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPS 300

Query: 301 PLPREERSPVNDEDNNGSPRGGSESA 310
           PLPREERSPVNDED NGSPRGGSESA
Sbjct: 301 PLPREERSPVNDEDANGSPRGGSESA 326

[Close]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.2e-78
Identity = 194/324 (59.88%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSHSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLS 240
           SRSPV +RERS+E   +RSRSP+        SLSP   +A  RSP  D+          S
Sbjct: 181 SRSPVRRRERSVE---ERSRSPKRMDD----SLSP---RARDRSPVLDDEG--------S 240

Query: 241 PGNRDSPRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPL-------P 300
           P   D         SP    +   + G D  GG       ++NG +   SP+        
Sbjct: 241 PKIIDG--------SPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 301 REERSPVND--EDNNGSPRGGSES 309
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

[Close]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-77
Identity = 181/285 (63.51%), Postives = 205/285 (71.93%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SHSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  S SRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRERSLE---RSDK---RSRSPRGRP---SPKRHSLSPPPSKAMKRSPTPD 240
           SYSRSRSPV+RE+S+E   RS K   RS SP+GR    SP R  +   P +      +P 
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPK 240

Query: 241 ERSPEEARRSLSP--GNRDSPRGRSRSRSPRGRSRSPMDEGEDFS 265
           E      R S SP  G  +SP G +      G+ RSP+D+  + S
Sbjct: 241 ENG--NGRNSASPIVGGGESPVGLN------GQDRSPIDDEAELS 274

[Close]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 97/245 (39.59%), Postives = 126/245 (51.43%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSR 180
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRR 180

Query: 181 SRS-PVKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLS 239
           SRS  +K  RS  RS  RSRS     S +  S SP P ++   S +P        RRS S
Sbjct: 181 SRSGSIKGSRSRSRSRSRSRSLSRPRSSRSKSRSPSPKRSRSPSGSP--------RRSAS 235

[Close]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot
Match: Q23121 (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=6239 GN=rsp-1 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 110/323 (34.06%), Postives = 138/323 (42.72%), Query Frame = 0


Query: 12  RLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
           R+Y+GRL+SR   +D++  F  YG++RDV +K  + FVEF D RDA+DA + LNG+++ G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 72  SRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARD---------------- 131
            R+I++ +K  PRG GG R   G G  G  R  +    G   RD                
Sbjct: 64  ERVILDYSK--PRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 123

Query: 132 ------------------CKAGDWKNKCYRCG-----ERGHIEKN----CQNSPKKLKR- 191
                                 D K++  R G        H   N    C  +P  LKR 
Sbjct: 124 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRC 183

Query: 192 -----------------------------GSYSRSPSPRRGRSHSRSYSRGRSYSRSRSP 251
                                         S SRS S  R R  SRS S  RS SRSRSP
Sbjct: 184 IEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP 243

Query: 252 VKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGNRD 262
            KR R   +S  RSRS R R +  R S SP       RSP   +RSP   R S SP  + 
Sbjct: 244 PKRSRRESKSKSRSRS-RSRSADNRKSRSP------SRSPKKVDRSPSPPRGSRSPSEKG 303

[Close]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 95/240 (39.58%), Postives = 124/240 (51.67%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSR 180
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRR 180

Query: 181 SRS----------PVKRERSLERSDKRSRSPRGR---PSPKRHSLSPPPSKAMKRSPTPD 222
           SRS             R RS  RS  R RS R +   PSPKR   S  PS + +RS +P+
Sbjct: 181 SRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKR---SRSPSGSPRRSASPE 235

[Close]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 300/310 (96.77%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPGNRDS 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSPGNRDS
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 PRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300
              R RSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 241 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300

Query: 301 GSPRGGSESA 310
           GSPRGGSESA
Sbjct: 301 GSPRGGSESA 309

[Close]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 3.3e-159
Identity = 299/309 (96.76%), Postives = 301/309 (97.41%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRSPVK
Sbjct: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242

Query: 181 RERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEE-ARRSLSPGNRDS 240
           R+RSLERSDKRSRSPRGR SPKRHSLSPPP KAMKRSPTPDERSPEE ARRSLSPGNRDS
Sbjct: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 302

Query: 241 PRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 300
              R RSRSPRGRSRSPMDEGEDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN
Sbjct: 303 RSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNN 362

Query: 301 GSPRGGSES 309
           GSPRGGSES
Sbjct: 363 GSPRGGSES 370

[Close]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL
Match: A0A6J1FWH1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447542 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.9e-156
Identity = 299/326 (91.72%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSDKRSRSPR-GRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGN 240
           PVKR+RSLERS+KRSRSPR GR SPKRHSLSPPPSKAMKRSPTPD RSPEEARRS SPGN
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSPSPGN 240

Query: 241 RDSPRG-------------RSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPS 300
           RDSPRG             RSRSRSPRGRSRSPMDE EDF+GGGSRNYR+EENGYSRSPS
Sbjct: 241 RDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPS 300

Query: 301 PLPREERSPVNDEDNNGSPRGGSESA 310
           PLPREERSPVNDED NGSPRGGSESA
Sbjct: 301 PLPREERSPVNDEDANGSPRGGSESA 326

[Close]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL
Match: A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.7e-156
Identity = 299/330 (90.61%), Postives = 303/330 (91.82%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR--GRSHSRSYSRGRSYSRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR  GRS SRSYSRGRSYSRSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGNRD 240
           +KRERSLERS+KRSRSPRGRPSPKRHSLSPPP KAMKRSPTPDERSPEEARRS SPGNRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKRSPTPDERSPEEARRSPSPGNRD 240

Query: 241 SPRGRS-------------------RSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYS 300
           SPRGRS                   RSRSPRGRSRSPMDE EDF  GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

Query: 301 RSPSPLPREERSPVNDEDNNGSPRGGSESA 310
           RSPSPLPREERSP+NDEDNNG+PRGGSESA
Sbjct: 301 RSPSPLPREERSPINDEDNNGTPRGGSESA 328

[Close]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL
Match: A0A6J1JVG4 (serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489058 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.9e-155
Identity = 296/317 (93.38%), Postives = 302/317 (95.27%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSHSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRS SRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSDKRSRSPR-GRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLSPGN 240
           PVKR+RSLERS+KRSRSPR GR SPKRHSLSPPPSKAMKRSPTPD RSPEEARRSLSP N
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSLSPEN 240

Query: 241 RDSPRG----RSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSP 300
           RDSPRG    RSRSRSPRGRSRSPMDE EDF+GGGSRNYR+EENGYSRSPSPLPREERSP
Sbjct: 241 RDSPRGRSRRRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPSPLPREERSP 300

Query: 301 VNDEDNNGSPRGGSESA 310
           VND++ NGSPRGGS SA
Sbjct: 301 VNDDEANGSPRGGSGSA 317

[Close]

BLAST of CcUC02G030730 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 292.4 bits (747), Expect = 4.4e-79
Identity = 194/324 (59.88%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSHSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDERSPEEARRSLS 240
           SRSPV +RERS+E   +RSRSP+        SLSP   +A  RSP  D+          S
Sbjct: 181 SRSPVRRRERSVE---ERSRSPKRMDD----SLSP---RARDRSPVLDDEG--------S 240

Query: 241 PGNRDSPRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPL-------P 300
           P   D         SP    +   + G D  GG       ++NG +   SP+        
Sbjct: 241 PKIIDG--------SPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 301 REERSPVND--EDNNGSPRGGSES 309
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

[Close]

BLAST of CcUC02G030730 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 291.6 bits (745), Expect = 7.5e-79
Identity = 181/285 (63.51%), Postives = 205/285 (71.93%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SHSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  S SRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRERSLE---RSDK---RSRSPRGRP---SPKRHSLSPPPSKAMKRSPTPD 240
           SYSRSRSPV+RE+S+E   RS K   RS SP+GR    SP R  +   P +      +P 
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPK 240

Query: 241 ERSPEEARRSLSP--GNRDSPRGRSRSRSPRGRSRSPMDEGEDFS 265
           E      R S SP  G  +SP G +      G+ RSP+D+  + S
Sbjct: 241 ENG--NGRNSASPIVGGGESPVGLN------GQDRSPIDDEAELS 274

[Close]

BLAST of CcUC02G030730 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-56
Identity = 157/283 (55.48%), Postives = 182/283 (64.31%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----S 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    S
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRS 120

Query: 162 PRRGRSHSRSYSRGRSYSRSRSPV-KRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAM 221
           PRR RS SRS SR RSYSRSRSPV +RERS+E   +RSRSP+        SLSP   +A 
Sbjct: 121 PRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSRSPKRMDD----SLSP---RAR 180

Query: 222 KRSPTPDERSPEEARRSLSPGNRDSPRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRRE 281
            RSP  D+          SP   D         SP    +   + G D  GG       +
Sbjct: 181 DRSPVLDDEG--------SPKIIDG--------SPPPSPKLQKEVGSDRDGGSP-----Q 240

Query: 282 ENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 309
           +NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 241 DNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248

[Close]

BLAST of CcUC02G030730 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-56
Identity = 144/244 (59.02%), Postives = 166/244 (68.03%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP--- 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP   
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKS 120

Query: 162 -SPRRGR--SHSRSYSRGRSYSRSRSPVKRERSLE---RSDK---RSRSPRGRP---SPK 221
            SPRR R  S SRSYSRGRSYSRSRSPV+RE+S+E   RS K   RS SP+GR    SP 
Sbjct: 121 RSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPD 180

Query: 222 RHSLSPPPSKAMKRSPTPDERSPEEARRSLSP--GNRDSPRGRSRSRSPRGRSRSPMDEG 265
           R  +   P +      +P E      R S SP  G  +SP G +      G+ RSP+D+ 
Sbjct: 181 RKVIDASPKRGSDYDGSPKENG--NGRNSASPIVGGGESPVGLN------GQDRSPIDDE 233

[Close]

BLAST of CcUC02G030730 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51
Identity = 149/275 (54.18%), Postives = 174/275 (63.27%), Query Frame = 0


Query: 50  EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 109
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 110 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSHS 169
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS S
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPS 139

Query: 170 RSYSRGRSYSRSRSPV-KRERSLERSDKRSRSPRGRPSPKRHSLSPPPSKAMKRSPTPDE 229
           RS SR RSYSRSRSPV +RERS+E   +RSRSP+        SLSP   +A  RSP  D+
Sbjct: 140 RSLSRSRSYSRSRSPVRRRERSVE---ERSRSPKRMDD----SLSP---RARDRSPVLDD 199

Query: 230 RSPEEARRSLSPGNRDSPRGRSRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSP 289
                     SP   D         SP    +   + G D  GG       ++NG +   
Sbjct: 200 EG--------SPKIIDG--------SPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVV 259

Query: 290 SPL-------PREERSPVND--EDNNGSPRGGSES 309
           SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 260 SPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259

The following BLAST results are available for this feature:

BLAST of CcUC02G030730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892927.1	4.3e-161	97.73	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] ...	[more]
XP_008445806.1	2.4e-159	96.77	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ...	[more]
XP_004143594.1	6.9e-159	96.76	serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004...	[more]
KAG6601030.1	3.2e-156	85.84	Serine/arginine-rich splicing factor RS2Z32, partial [Cucurbita argyrosperma sub...	[more]
XP_022942535.1	1.2e-155	91.72	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata]...	[more]

BLAST of CcUC02G030730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYA5	6.2e-78	59.88	Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9FYB7	1.1e-77	63.51	Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q3T106	3.1e-21	39.59	Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1	[more]
Q23121	1.2e-20	34.06	Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=62...	[more]
Q16629	1.6e-20	39.58	Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=...	[more]

BLAST of CcUC02G030730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDJ7	1.1e-159	96.77	serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3...	[more]
A0A0A0KS31	3.3e-159	96.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1	[more]
A0A6J1FWH1	5.9e-156	91.72	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1CET7	7.7e-156	90.61	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant...	[more]
A0A6J1JVG4	2.9e-155	93.38	serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima ...	[more]

BLAST of CcUC02G030730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37340.1	4.4e-79	59.88	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.2	7.5e-79	63.51	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.3	1.1e-56	55.48	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.1	2.4e-56	59.02	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.2	1.0e-51	54.18	arginine/serine-rich zinc knuckle-containing protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 12..77 e-value: 2.0E-19 score: 80.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 13..74 e-value: 6.6E-15 score: 54.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 11..81 score: 17.216459
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 102..118 e-value: 2.9E-4 score: 30.1 coord: 124..140 e-value: 0.0022 score: 27.3
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 123..139 e-value: 1.8E-4 score: 21.4 coord: 102..117 e-value: 2.1E-6 score: 27.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 102..117 score: 10.147202
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 124..140 score: 10.575755
None	No IPR available	GENE3D	4.10.60.10		coord: 94..121 e-value: 1.7E-6 score: 29.6 coord: 122..160 e-value: 9.8E-6 score: 27.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..169
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 6..290
None	No IPR available	PANTHER	PTHR23147:SF152	SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33	coord: 6..290
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..87 e-value: 1.5E-22 score: 81.6
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 95..141
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G030730.1	CcUC02G030730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding