CcUC02G029260 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCAAAAACAACGGGAGACGTTGATGTTAGAAGATGTGGAGGAAATCCTTCGAATTCTTGTATATCCAACTAATAGGGCTGATCGTTGGATTTGGCACTATGGTAACAAGGGGGAGTACTCAGTGAAGAGCGGCTATAAATGTGCTATTTTTCATAAAATTTTGAGCTGGGGGTACGGGTCAGTTGTTGGGACGGCGTGGTGGAATCATCTTTGGAAGCTTCCTATTCCTGCTAAAGTTGCTTTGTTTGTTTGGAAGTCATGCCATGAGAGTATTCTGGCGTTTGTTCCACTGCATAGAGGTATAGCAGTTCGTCCTTGGTGTCAGGTATGTAAGGAGAAATCAGCGGGCTCTATTTGGGTGTAGTCGTGCTAAATGCATCTGGTCGTCTTTATTTGGATCAAGATGGTGTGTTAATGCTAAGCACTTTAGTTGTCTGGATATATGGATTGAGTTGTCTAATGATGATTTAGCTTGTGATTGTATAACTGCTTGGGCCATTTGGGGGATCGAAATAAAGTTGTTCATTCAGCTCTTGTCCCTTCGGTGGACAAAAATATGTCTGACTTGTTGGACAAAAATCTTAACATTATTCATTGTGATGCTGCCTTTAAACTTGGTGATCACATAGTGGAAACTGGTGGGGTTGTTGATTCATCATCAGGAGAGAACTTAGCCTCTTTGAGTGGGTTCAGAGATTTCTCTGAGAATGCTCTAACAATTTCTTTGTCCTCAACGCCTCTAAATTTCCAGGAATTAGTCACTTCNTCGTTCTAGTGCCCGAAAATAATATTCCAAAGCTTTCGTATGTTCTCCGTTCCTTGTGTGGATAAGACCTATGTTATAGAGTATATAACTTCGATCATAGGGATCGATTTCTAGTCGCATAGCTTCATAATAATTCTGTAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCCGTTACGGTCGTTCGTTATTCCATTCAAAGAATCTCCGTTCCAGAACCGTACGTGAGATTTTCATCTCATACGGCTCCCCCTTTATGTGATGCGCATAATGAGATGAGAATAATACATGAAATCAAAAAAGATTGAAATACTCTCATTATGAACTCATGGGACTAGCGTTTTTACAAAAAATCTCTAGCCAACCTTCCTGTAAAAGATCTTTTCTTAACATCAAGCATGGTGTTACTAGATAAAAAAAAAAGGGTAACTCTAACAATTTCTTTGTCCTCAACGCCTCTAAATTTCCAGGAATTAGTCACTTCAACAGTCTTCGATGGTTCTACA ATGCATCAAAAACAACGGGAGACGTTGATGTTAGAAGATGTGGAGGAAATCCTTCGAATTCTTGTATATCCAACTAATAGGGCTGATCGTTGGATTTGGCACTATGGTAACAAGGGGGAGTACTCAGTGAAGAGCGGCTATAAATGTGCTATTTTTCATAAAATTTTGAGCTGGGGGTACGGGTCAGTTGTTGGGACGGCGTGGTGGAATCATCTTTGGAAGCTTCCTATTCCTGCTAAAGTTGCTTTGTTTGTTTGGAAGTCATGCCATGAGAGTATTCTGGCGTTTGTTCCACTGCATAGAGGTATAGCAGTTCGTCCTTGGTGTCAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCCGTTACGGTCGTTCGTTATTCCATTCAAAGAATCTCCGTTCCAGAACCGTACGTGAGATTTTCATCTCATACGGCTCCCCCTTTATATAAAAAAAAAAGGGTAACTCTAACAATTTCTTTGTCCTCAACGCCTCTAAATTTCCAGGAATTAGTCACTTCAACAGTCTTCGATGGTTCTACA ATGCATCAAAAACAACGGGAGACGTTGATGTTAGAAGATGTGGAGGAAATCCTTCGAATTCTTGTATATCCAACTAATAGGGCTGATCGTTGGATTTGGCACTATGGTAACAAGGGGGAGTACTCAGTGAAGAGCGGCTATAAATGTGCTATTTTTCATAAAATTTTGAGCTGGGGGTACGGGTCAGTTGTTGGGACGGCGTGGTGGAATCATCTTTGGAAGCTTCCTATTCCTGCTAAAGTTGCTTTGTTTGTTTGGAAGTCATGCCATGAGAGTATTCTGGCGTTTGTTCCACTGCATAGAGGTATAGCAGTTCGTCCTTGGTGTCAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCCGTTACGGTCGTTCGTTATTCCATTCAAAGAATCTCCGTTCCAGAACCGTACGTGAGATTTTCATCTCATACGGCTCCCCCTTTATATAAAAAAAAAAGGGTAACTCTAACAATTTCTTTGTCCTCAACGCCTCTAAATTTCCAGGAATTAGTCACTTCAACAGTCTTCGATGGTTCTACA MHQKQRETLMLEDVEEILRILVYPTNRADRWIWHYGNKGEYSVKSGYKCAIFHKILSWGYGSVVGTAWWNHLWKLPIPAKVALFVWKSCHESILAFVPLHRGIAVRPWCQLPHNFLRIEPTSVTVVRYSIQRISVPEPYVRFSSHTAPPLYKKKRVTLTISLSSTPLNFQELVTSTVFDGST Homology
BLAST of CcUC02G029260 vs. NCBI nr
Match: XP_030479077.1 (uncharacterized protein LOC115696311 [Cannabis sativa]) HSP 1 Score: 81.3 bits (199), Expect = 9.8e-12 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CcUC02G029260 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 80.5 bits (197), Expect = 1.7e-11 Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of CcUC02G029260 vs. NCBI nr
Match: TXG50764.1 (hypothetical protein EZV62_023288 [Acer yangbiense]) HSP 1 Score: 79.7 bits (195), Expect = 2.8e-11 Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of CcUC02G029260 vs. NCBI nr
Match: KAF4380039.1 (hypothetical protein F8388_018163 [Cannabis sativa]) HSP 1 Score: 79.0 bits (193), Expect = 4.8e-11 Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of CcUC02G029260 vs. NCBI nr
Match: XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]) HSP 1 Score: 78.6 bits (192), Expect = 6.3e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of CcUC02G029260 vs. ExPASy TrEMBL
Match: A0A803QG02 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.7e-12 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CcUC02G029260 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 8.1e-12 Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of CcUC02G029260 vs. ExPASy TrEMBL
Match: A0A803QFX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11 Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of CcUC02G029260 vs. ExPASy TrEMBL
Match: A0A5C7H1A9 (zf-RVT domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023288 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11 Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of CcUC02G029260 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-11 Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0
BLAST of CcUC02G029260 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.5e-05 Identity = 29/103 (28.16%), Postives = 50/103 (48.54%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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