CcUC02G029220 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G029220
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	F-box protein
Location	CicolChr02: 24119870 .. 24123273 (-)
RNA-Seq Expression	CcUC02G029220
Synteny	CcUC02G029220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTAGGTTTTATATATTCAATAAATATTAAATTTTGTCTATGTATTTTTAAGAAAAGAAAAATTAACTTTTTGGTCCGTAAATTTTGAGTATAATTTTCATTTAGTCATTTTAAATTATAAAATTGTTAAAAATATTTTTAAATATATATAAAAAAAAACTTTTTCAAACGAAATCACCGTTAGGCAATGACAGGCTTTATTATCTGCATAAGTTAATTAATTTGGCTATATATGAAACAATCCTAGTTAGATTTTTCTTAATTAATGAAGAAAAATTAATAAAGTCTACATAAGTTAATTAATTTGGCTATATATATGAAACAATCCTAGTTAAATTTTTCTTAATTAATGAAGAAAAATTAAAATGATTATTAAGTGAAAAAATTGAAGTTAAAAGTGTATACTACAAAACCTAACTAACTAACCAACTAAAAAGGTATTTTCTCCTTCAATAAACTTCAATTAACGATAAACTAACCACTTGAACTAAATTGTTAATACATTTGGGAGGAAGCATAATGATATTGCAACGAAAAAGGTTTTTAGTTGTTGAATTGGTCTATGAAATTGGTAGATGAATTCAATACAGCGAAGTTCATGCGAGAAGGAGACAAAGATCAGAGCGCCATCGTGGCGAGCTCCTAGATTCATGAAAAACTCATCGCTCGTATAATTTGGATATTTTTGAAGCTCAGAATCTTGACATGGTGGCGATATCATGTCAACATCCTCTCTTTCTCTCTCTTCTTTGAATCTTCCCTTTGCTTTTTTATGCTTCTCTTCTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCCACCCATTTTCGTCTTTCAACGCCACGAACTTCTTCTTTTTCCAAATTCATATTCCAAGTGGACAGCGGAGGATCGGGATGGATTCGGCTGCTTTGTGGTCGGAAGGGATGGAGTTGGAGCCGGAGATCGATCGCTTGCCGATTGACCTACTGGCTCATATTTTTGCCATGATCACCTCCTTCACCGATTTGGCTCAGTAATTCATTCTTAATTTCGGTTTTATGAGTGTTTTTTTTTTTTTTTTTGCTTCAATTGCTCTGGTTCTTGTTCCCTAATTTTTGAGGGTTTATGCGATTCCGGAAAAACGCAGGGCATGCGGTGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATGTAATCTCTCTCTCTCTCTCTGTGAAATTTCAGTCTGCTACTTAATTTTTCTTCAGATTGTTTTTCTTCGAGTAGTTTCTTATTACAGATAGCTATTGGTATTGTAAGCAGTGAGAGATTTCCATTTTCCGTTTATAATGTCAGCAATTTGATTATGAACCACAAAAACAAAGGTTTCTCTTAAGATATGATGTTGTTTGGGCATATTTTCGGTAGAAAGTTCTTCAAAATTGTTTTGTAAAGATAGTTTTATTCTTCTATAAAAAAATATGGATGATAACTCCACTTCTTGCCTTATTCGACATGCCTACAGTTTTCGAGAGCTCGCCATGTAATCTCTCCATCTTTCTCTGAAATTTCAGTTTGCTTCTGAAATTTTCATCAGTTTGCTTTTCTTCGAGTAGTTTCTGTTTACAGATGGCTATTGGTGTTGTGGGCAGTGAGATGAAACGAGTTTTTCAAATTCGCCAGGTTAATCAATTCAATTGGCTTTCCGTTTCCATTATTCAGCCAATTTGATTATGAACCACAAAAACAGAGGTTTCTCTTAAGATACGATGTTGTTTGGGCATATTTTCGAGAGAAAGTTCTTTAAAATTGTTTTGTAAGGCTGGTCATATTCTTGATGTTTATGGCTCGTATTTTTGGTTGACCTTGAGGACGTTTTGTTTTTCAGCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATATCTCGTGCAAAGTGCATCCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGGTATGATATTATCTTATCTTATAACATACATTCCTAAAGAAATAGGCCTTAAGTTGTTATCGGAGTATGAGTTTAGGTGGAAAATGAACTACTGAATTTCCGTAAATTTTACATGTTCTAGAATATCTGTTGTTTGTAGTTTTTGATCTTCTAGAGTCTACCTTCAAAAAGTAAACACCAGTTTGAGAAATTTTCTGGTCCTGAAATTTCATGTTCTTCAGAGGAATCTATTTTCTACTTCAGAAATTTTTGAAGAGCAACTTTGGAAGTACAGTTCTACTTGTTCTTAAAAGTAGACCTTCATAACCAAAAAAGCAACTTTCAAAAAATAGTAATCATATGCCAACATGAGCACAAGTCACTAACATAAAGTATGCATTTTGAACCAAAATGTCGTAAGTTCGAATTCTTCGGCCCCATATTGTTGAACGAAAAAAAGAAAAGAAAAAAAAAAGTTAATACTTCACATGTGCTTCACTTCACTTTTGTTCTAAAATGCAGAATTATTTTTGAAAAACTCCTAATTCCCACATCTTGAATAGTTCATTAACATTTAGATTCCCTTTCTAAAACTGTGTTTGGTTGTGTTCTCAGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATATCGGTGGAACCTTTGTCACAGATGTATCTCTGTTTGCAATCGCGGATAACTGTCCAAATTTGAAGGTAAATTCTAAGAATCTCCTTTCTCATGAATCATATGATACATACATGTCTTGCACAATCTTTAAGCAGTGTATTTCTTTCTTAATTTTGTAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCAATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCATTCTATGTGGCCTGTTCTGTGAAATATGCTCAAATATTCACATCCTGTAAAGCTTCAATTGTACGTATGTCTTCATCTTTGTGTTTCCCCTCGTTAAAGTCAAATATAGATTTGTCATAATTTCCTCAATAAGCTGATTATGGTACTTTCAGTTCATTTAAAACTAAATTATACTCTCCCTGTGTAAATATAAGTGTACGTAAAAACTAAGCTCGCTTATTTTGGAGCTAATTGTGCTTATATTCTTATAATCCCGTAAATACATTTCATTGGCACCTAAATGTCAAGATTTGGCCAGTAATGTCTTTATATCCGAATAATCCTTTTAGTTTATAAGTTTATTATCCC

mRNA sequence

CAAATTTAGGTTTTATATATTCAATAAATATTAAATTTTGTCTATGTATTTTTAAGAAAAGAAAAATTAACTTTTTGGTCCGTAAATTTTGAGTATAATTTTCATTTAGTCATTTTAAATTATAAAATTGTTAAAAATATTTTTAAATATATATAAAAAAAAACTTTTTCAAACGAAATCACCGTTAGGCAATGACAGGCTTTATTATCTGCATAAGTTAATTAATTTGGCTATATATGAAACAATCCTAGTTAGATTTTTCTTAATTAATGAAGAAAAATTAATAAAGTCTACATAAGTTAATTAATTTGGCTATATATATGAAACAATCCTAGTTAAATTTTTCTTAATTAATGAAGAAAAATTAAAATGATTATTAAGTGAAAAAATTGAAGTTAAAAGTGTATACTACAAAACCTAACTAACTAACCAACTAAAAAGGTATTTTCTCCTTCAATAAACTTCAATTAACGATAAACTAACCACTTGAACTAAATTGTTAATACATTTGGGAGGAAGCATAATGATATTGCAACGAAAAAGGTTTTTAGTTGTTGAATTGGTCTATGAAATTGGTAGATGAATTCAATACAGCGAAGTTCATGCGAGAAGGAGACAAAGATCAGAGCGCCATCGTGGCGAGCTCCTAGATTCATGAAAAACTCATCGCTCGTATAATTTGGATATTTTTGAAGCTCAGAATCTTGACATGGTGGCGATATCATGTCAACATCCTCTCTTTCTCTCTCTTCTTTGAATCTTCCCTTTGCTTTTTTATGCTTCTCTTCTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCCACCCATTTTCGTCTTTCAACGCCACGAACTTCTTCTTTTTCCAAATTCATATTCCAAGTGGACAGCGGAGGATCGGGATGGATTCGGCTGCTTTGTGGTCGGAAGGGATGGAGTTGGAGCCGGAGATCGATCGCTTGCCGATTGACCTACTGGCTCATATTTTTGCCATGATCACCTCCTTCACCGATTTGGCTCAGGCATGCGGTGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATATCTCGTGCAAAGTGCATCCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATATCGGTGGAACCTTTGTCACAGATGTATCTCTGTTTGCAATCGCGGATAACTGTCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCAATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCATTCTATGTGGCCTGTTCTGTGAAATATGCTCAAATATTCACATCCTGTAAAGCTTCAATTGTACGTATGTCTTCATCTTTGTGTTTCCCCTCGTTAAAGTCAAATATAGATTTGTCATAATTTCCTCAATAAGCTGATTATGGTACTTTCAGTTCATTTAAAACTAAATTATACTCTCCCTGTGTAAATATAAGTGTACGTAAAAACTAAGCTCGCTTATTTTGGAGCTAATTGTGCTTATATTCTTATAATCCCGTAAATACATTTCATTGGCACCTAAATGTCAAGATTTGGCCAGTAATGTCTTTATATCCGAATAATCCTTTTAGTTTATAAGTTTATTATCCC

Coding sequence (CDS)

ATGGATTCGGCTGCTTTGTGGTCGGAAGGGATGGAGTTGGAGCCGGAGATCGATCGCTTGCCGATTGACCTACTGGCTCATATTTTTGCCATGATCACCTCCTTCACCGATTTGGCTCAGGCATGCGGTGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATATCTCGTGCAAAGTGCATCCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATATCGGTGGAACCTTTGTCACAGATGTATCTCTGTTTGCAATCGCGGATAACTGTCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCAATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCATTCTATGTGGCCTGTTCTGTGA

Protein sequence

MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL

Homology

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BLAST of CcUC02G029220 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >KAA0045774.1 F-box protein [Cucumis melo var. makuwa] >TYJ99508.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 221/232 (95.26%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDS  +WS  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGL+EIS AKCIPNLKSISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTIVLWSCRHVTET
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL+SMWPV+
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of CcUC02G029220 vs. NCBI nr
Match: XP_004149695.1 (F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_006050 [Cucumis sativus])

HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122
Identity = 220/232 (94.83%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDSA +WS  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 63

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGC ITDHGL+EIS AKCIPNLKSISL
Sbjct: 64  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISL 123

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTIVLWSCRHVTET
Sbjct: 124 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 183

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL+SMW V+
Sbjct: 184 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSVV 235

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BLAST of CcUC02G029220 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida])

HSP 1 Score: 444.9 bits (1143), Expect = 4.3e-121
Identity = 220/236 (93.22%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 1   MDSAALWSEGMEL----EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSL 60
           MD AA+W   ME     EPEIDRLPIDLLAHIFAMITSFTDLAQACGV RKWKEGVKLSL
Sbjct: 1   MDLAAVWPVAMESESEPEPEIDRLPIDLLAHIFAMITSFTDLAQACGVSRKWKEGVKLSL 60

Query: 61  GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLK 120
           GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEIS AKCIPNL+
Sbjct: 61  GRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISLAKCIPNLR 120

Query: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRH 180
           SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRH
Sbjct: 121 SISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRH 180

Query: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS+L+SMWPV+
Sbjct: 181 VTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSMLNSMWPVV 236

[Close]

BLAST of CcUC02G029220 vs. NCBI nr
Match: XP_022947259.1 (F-box protein At5g67140 [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 5.2e-119
Identity = 217/233 (93.13%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           M S  +W   MELEPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKWKEGVKLSLGRR+
Sbjct: 1   MSSGDMWPIEMELEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSLGRRE 60

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDD STARLI HAYSLR+LDISRSRWGCQITDHGLHEIS AKCIPNLKSISL
Sbjct: 61  SLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLKSISL 120

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTI LWSCRHVTET
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRHVTET 180

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LL+SMWPVL
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of CcUC02G029220 vs. NCBI nr
Match: XP_022927967.1 (F-box protein At5g67140-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 212/233 (90.99%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDSAA+W+ GM+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR++
Sbjct: 10  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE 69

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG QITDHGLH+IS A CIPNL SISL
Sbjct: 70  SLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISL 129

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIADNCPNLK+IVLWSCRHVTE+
Sbjct: 130 WGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTES 189

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LL+SMWPV+
Sbjct: 190 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 242

[Close]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.0e-85
Identity = 148/215 (68.84%), Postives = 182/215 (84.65%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMD 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ RR++LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 71  DNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISLWGMAGITDKG 130
           D+ST+RL+  A++L+ELDISRSRWGC ITD+GL++I+ A+C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 131 VVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCR 190
           VVQLISR +SLQ+LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 191 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 226
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-14
Identity = 58/221 (26.24%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 9   EGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSF 68
           E M++E     E   +P++LL  I  ++   T +  +C +C  W++ V L L  R SLS+
Sbjct: 16  ENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGL-TRLSLSW 75

Query: 69  AGWKM--------------------------DDNSTARLIRHAYSLRELDISRSRWGCQI 128
               M                          +DN+   +  H + L++LD+S+S    +I
Sbjct: 76  CKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKI 135

Query: 129 TDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTF--VTDVSL 188
           TDH L+ ++R     NL  ++L G    +D  +  L      L+ LN+ G    V+D +L
Sbjct: 136 TDHSLYSLARG--CTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTL 195

Query: 189 FAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
            AI +NC  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 196 QAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13
Identity = 55/219 (25.11%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 9   EGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWK 68
           EG+ ++ E   +P++LL  I +++    ++  A GVC  W++ +   L R + LS+    
Sbjct: 21  EGISIK-EWKDIPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNN 80

Query: 69  M--------------------------DDNSTARLIRHAYSLRELDISRSRWGCQITDHG 128
           M                          +DN+   +  H + L+ELD+S+S    +ITD  
Sbjct: 81  MNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRS 140

Query: 129 LHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTF--VTDVSLFAIA 188
           L+ ++     P+L  ++L G    +D  +  L      L+ LN+ G    VTD +L AI 
Sbjct: 141 LYALAHG--CPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIG 200

Query: 189 DNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWG 200
           +NC  ++++ L  C ++++ G++ L   C  L ++++ G
Sbjct: 201 NNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCG 231

[Close]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 97  QITDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGG-TFVTDVS 156
           +++D GL  I R+   P+L S+SLW ++ ITD G++++      L+ L +   + +TD  
Sbjct: 163 KVSDLGLRSIGRS--CPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 157 LFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
           L AIA +CPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 35/115 (30.43%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 84  LRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQN 143
           L +L I  S +  ++TD GL  ++     P+L+ +SLW +  ++D G+ ++      ++ 
Sbjct: 140 LGKLQIRGSGFESKVTDVGLGAVAHG--CPSLRIVSLWNLPAVSDLGLSEIARSCPMIEK 199

Query: 144 LNIGG-TFVTDVSLFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
           L++     +TD  L AIA+NC NL  + + SC  V   GL  +  +C  L SI++
Sbjct: 200 LDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISI 252

[Close]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.6e-124
Identity = 221/232 (95.26%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDS  +WS  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGL+EIS AKCIPNLKSISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTIVLWSCRHVTET
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL+SMWPV+
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.6e-124
Identity = 221/232 (95.26%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDS  +WS  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGL+EIS AKCIPNLKSISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTIVLWSCRHVTET
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL+SMWPV+
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV 232

[Close]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL
Match: A0A0A0LPU5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 4.9e-123
Identity = 220/232 (94.83%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDSA +WS  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 63

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGC ITDHGL+EIS AKCIPNLKSISL
Sbjct: 64  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISL 123

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTIVLWSCRHVTET
Sbjct: 124 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 183

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL+SMW V+
Sbjct: 184 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSVV 235

[Close]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL
Match: A0A6J1G699 (F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 217/233 (93.13%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           M S  +W   MELEPEIDRLPIDLLAHIFAMI SFTDLAQACGVCRKWKEGVKLSLGRR+
Sbjct: 1   MSSGDMWPIEMELEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSLGRRE 60

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDD STARLI HAYSLR+LDISRSRWGCQITDHGLHEIS AKCIPNLKSISL
Sbjct: 61  SLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLKSISL 120

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTI LWSCRHVTET
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRHVTET 180

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LL+SMWPVL
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL
Match: A0A6J1EIZ0 (F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.6e-119
Identity = 212/233 (90.99%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MDSAALWSEGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60
           MDSAA+W+ GM+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR++
Sbjct: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE 82

Query: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISL 120
           SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG QITDHGLH+IS A CIPNL SISL
Sbjct: 83  SLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISL 142

Query: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTET 180
           WGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIADNCPNLK+IVLWSCRHVTE+
Sbjct: 143 WGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTES 202

Query: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLHSMWPVL 233
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LL+SMWPV+
Sbjct: 203 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 255

[Close]

BLAST of CcUC02G029220 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 317.8 bits (813), Expect = 7.4e-87
Identity = 148/215 (68.84%), Postives = 182/215 (84.65%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMD 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ RR++LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 71  DNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEISRAKCIPNLKSISLWGMAGITDKG 130
           D+ST+RL+  A++L+ELDISRSRWGC ITD+GL++I+ A+C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 131 VVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCR 190
           VVQLISR +SLQ+LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 191 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 226
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of CcUC02G029220 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 58/221 (26.24%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 9   EGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSF 68
           E M++E     E   +P++LL  I  ++   T +  +C +C  W++ V L L  R SLS+
Sbjct: 16  ENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGL-TRLSLSW 75

Query: 69  AGWKM--------------------------DDNSTARLIRHAYSLRELDISRSRWGCQI 128
               M                          +DN+   +  H + L++LD+S+S    +I
Sbjct: 76  CKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKI 135

Query: 129 TDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTF--VTDVSL 188
           TDH L+ ++R     NL  ++L G    +D  +  L      L+ LN+ G    V+D +L
Sbjct: 136 TDHSLYSLARG--CTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTL 195

Query: 189 FAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
            AI +NC  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 196 QAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of CcUC02G029220 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 58/221 (26.24%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 9   EGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSF 68
           E M++E     E   +P++LL  I  ++   T +  +C +C  W++ V L L  R SLS+
Sbjct: 16  ENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGL-TRLSLSW 75

Query: 69  AGWKM--------------------------DDNSTARLIRHAYSLRELDISRSRWGCQI 128
               M                          +DN+   +  H + L++LD+S+S    +I
Sbjct: 76  CKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKI 135

Query: 129 TDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTF--VTDVSL 188
           TDH L+ ++R     NL  ++L G    +D  +  L      L+ LN+ G    V+D +L
Sbjct: 136 TDHSLYSLARG--CTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTL 195

Query: 189 FAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
            AI +NC  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 196 QAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of CcUC02G029220 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 55/219 (25.11%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 9   EGMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWK 68
           EG+ ++ E   +P++LL  I +++    ++  A GVC  W++ +   L R + LS+    
Sbjct: 21  EGISIK-EWKDIPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLR-LSWCNNN 80

Query: 69  M--------------------------DDNSTARLIRHAYSLRELDISRSRWGCQITDHG 128
           M                          +DN+   +  H + L+ELD+S+S    +ITD  
Sbjct: 81  MNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRS 140

Query: 129 LHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTF--VTDVSLFAIA 188
           L+ ++     P+L  ++L G    +D  +  L      L+ LN+ G    VTD +L AI 
Sbjct: 141 LYALAHG--CPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIG 200

Query: 189 DNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWG 200
           +NC  ++++ L  C ++++ G++ L   C  L ++++ G
Sbjct: 201 NNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCG 231

[Close]

BLAST of CcUC02G029220 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 97  QITDHGLHEISRAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGG-TFVTDVS 156
           +++D GL  I R+   P+L S+SLW ++ ITD G++++      L+ L +   + +TD  
Sbjct: 163 KVSDLGLRSIGRS--CPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 157 LFAIADNCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 198
           L AIA +CPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

The following BLAST results are available for this feature:

BLAST of CcUC02G029220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457759.1	1.6e-123	95.26	PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-b...	[more]
XP_004149695.1	1.0e-122	94.83	F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_0...	[more]
XP_038902095.1	4.3e-121	93.22	F-box protein At5g67140-like [Benincasa hispida]	[more]
XP_022947259.1	5.2e-119	93.13	F-box protein At5g67140 [Cucurbita moschata]	[more]
XP_022927967.1	2.0e-118	90.99	F-box protein At5g67140-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CcUC02G029220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH99	1.0e-85	68.84	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]
O49286	4.7e-14	26.24	F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1	[more]
Q9LPL4	1.8e-13	25.11	F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1	[more]
Q9SKK0	2.6e-12	35.29	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q708Y0	2.1e-09	30.43	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]

BLAST of CcUC02G029220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1P2	7.6e-124	95.26	F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1	[more]
A0A5D3BMX7	7.6e-124	95.26	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 ...	[more]
A0A0A0LPU5	4.9e-123	94.83	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 ...	[more]
A0A6J1G699	2.5e-119	93.13	F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1	[more]
A0A6J1EIZ0	9.6e-119	90.99	F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CcUC02G029220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67140.1	7.4e-87	68.84	F-box/RNI-like superfamily protein	[more]
AT1G77000.1	3.4e-15	26.24	RNI-like superfamily protein	[more]
AT1G77000.2	3.4e-15	26.24	RNI-like superfamily protein	[more]
AT1G21410.1	1.3e-14	25.11	F-box/RNI-like superfamily protein	[more]
AT2G25490.1	1.8e-13	35.29	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 163..188 e-value: 5.8E-4 score: 29.2 coord: 112..137 e-value: 1.4 score: 17.9 coord: 81..109 e-value: 200.0 score: 4.3 coord: 138..162 e-value: 12.0 score: 13.9
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 17..50 e-value: 2.2E-6 score: 27.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 18..54 e-value: 1.1E-5 score: 27.2
None	No IPR available	PANTHER	PTHR16134:SF117	SUBFAMILY NOT NAMED	coord: 10..221
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 10..221
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 73..218
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 55..224 e-value: 6.7E-28 score: 99.2
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 16..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G029220.1	CcUC02G029220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding