CcUC02G028420 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G028420
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Signal sequence receptor subunit alpha
Location	CicolChr02: 22620221 .. 22625739 (+)
RNA-Seq Expression	CcUC02G028420
Synteny	CcUC02G028420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTCTCTCTGGTTCTATTGCATTTGGTGCTAGAGCTCCGTCCATTTTTCTGTTGGATCTTGTACGTGTTAGATTTGCTAATTTTCAGCTATAATCTTCACGGTGATTCTTTTCTTCAACATTTAATGCTGTTCGATAGCATTTCTGTGGCTCTTCGACTCTCTTATAATTGATTTCAGTTTAAATATTATCTCCTTAGAGCGGGTGCACGAAATTGCTTGGGCAGCGTCTTTAGCGTATCCATATGAACTGTATAAATTAAGGTCGATATTTGGGTTCGTTGAGCGGAGTTTGATCCGCGCGATTCAAGTGTTTTCGTTCTGGTTAATAGCTGGCTTTAGGTTGTTCTTCAGTTAAAAATTAAAATTGTTATCCATCTTCCACACGACGTGATGAATCTGTATACTTCAGTTCTTCCTTTGTTTTTATGTATTTCGTTTCTTTTCCTTCTTAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGAAGATGCCGCCACTGACGATGCCACTGACTTAGGGATTGTTGCGGAGGATGAGCTAGATTTTGGTGATGGGAGCTTCAGCGCAGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTAGTGAGTATTCCATTTAAGTTGAACAGAAATATATTCTTTTCAATATGATGTAAAATGGTATAATTAATTTATAATTTCTCCAAATGCAGTAGTGGTGGCCGGAGAAGAGACTGAACTATTGGCCGGAGTGAAAAATAATGGTACTTGACCCTTCCTGTCAACTACAAGTGTTGTGTTGTCGTCATTTTTGAATAATCAGCAACATACGGCAGTTCTATAATTCATTTGGTGCCGTTGATTGTTGCTGCCTTGTCTTCTGACGGGGCAATGCACGATTTCCAGTTTGTGTTTCCTGATTCTTCCTGTTTTTCCAATTTGTGCGTTGTTAATTTTGTTTAATCTCCGTTTTCTTCATGTATTAATAACTTTTTCGTTAAATATTTTTATCTGTAATTTTGAGGGTTATTAGGGCTCGGGTGCTCAGAAATGAAAAAACAGTGAGGTCGCTTATCGATACCTCGAGCTGTGGTTAAAAACTTTCTCTTGAAAGGATTGTTTGAAGTTTTCCTTCATGTATTCTTGATGATGGAGTCTCCTGATGTTATACCTTTTTTTTCCCCTCTCAATTGCTGCTAGTTATCTGCTGTGTTTCTTACTTCGTTTCTTTTGGTGAAAAAAATAGGGGATTCTAGCTTGAATGTCATTGCAATAAAGGCGAGTGTTCATTACACTTTTGATCATCGATTACTGATTCAAAATCTTACCGCACTGGTATGTGACTGCATGGTTAATGTCTACAGGTTTCTTTTTACCCCATCAATTCATTGCATAACATAACCTGTATCTGGTCTGCCATATGCAAGTATAATTTTATGCCAAGAAAATTTCAGAACTTTTGCTCACTGGGTTCAAGTATGCATGATGTAAGCATCATTTACCTATTTTGTATGTTAGGGGGATGAATTCTTGATTGAGTTAAAGCTGTGAGATATGAGCTAAGTTTCTTAAGGAGCCCTTTCTTAGGTCTTGGAGGTTGGTCCTGCTTTAGCTTATAGTTAGAGTCTGCAATATAAATCAACTTTCTTGGGCTCAGAAGCCTAGGAGGAGACGGTAACGCCGTTTGCCTTGACCTATTAAAATTTAATATAGTAATCATCACGACATAGACTCCACACAAAAAACGGCCACTGGATAAACTACAAAGAAATGTACAGTCTAAAGACTAGGGAAGGGGAAACCCAGCCACCAAAAGACTACAACAAGGCACTATAATCAAGAAGTGCTGATTAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGATACTGAAAGGTTTCTTATAAGAAACGATGTTGTGTTGTTGTATCACTTCATGAAATTCTATTGTAGACTTTTAGTTTTGGCTGCCCTCCTTGGTGGTGTTAATCATTCCATAAGTGAGATTTTATCTCACTGTATTTCTGAATTTTTCTAGGAGTTATTTTTTCGTACATAACATCAGTTCTTTATGCTCAAAGAAGTAGATAAGTAGTGTCTTGTTTCTCTTTTTCTAAGAATTTCTTATGTGCCTGTATGTACATATTACTTGCTACTGCATTTGCATCTAGTTGATTCCCATCTGCTATTTATTTGTGTTTATGTTTTGGTTTCAGACTTTTAACAATGCATCGGTACCAGCATCGTTACAAGCAACTTTCCCATACCTTTTTGCTGTCAGCAAATATCTTCAGGTTTTTGTGTTGATGTGATAGTCCTCTACATTGAAAATTAATTTATTGTTATCTTGTTTATTTCCCTTTTTCTGTGCTTTTTGACTGTAACTATAAGAATGCATAAATGGCTAAAAAGACATTTCTCTTTGTACAGTCTGGGAATTTTGATCTCGTTGGAACCATTATCTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGCTGAAGCTAGTGGTTTTCTCAGCATTGAATCTGTATTTCTAGTTACGCTTGGTATTGCACTTATCGTGCTGCTTGGTTTATGGATTCATGGTCAAATACAGAATCTTTCCAAGGTACGCACGCCTGCTAAAACGTTTTTTTAAAGCAGCAAATTCTAAATATCAGTGTTTTGAAGATTCATATCCAGCATTCTTGTGGGTGAATTATGTTTAACCACACAAAAAATAACTAGCTAATGTGTTCAGTAAGTCTGCTTATAATGCAATATGTTGATTTGATAGAGTTTTCGCTTGGTTCTTATCACCTTTTCTATTGTTTTAATCGGTGAAATTTTCTTAGTTTCCGATCAAAAGATAAAATACAATAACAATTGTATGCTGATTGATCTCAGGTACATTTTGTGCAGTAGGGATTTGAAGTACGTTAAGTTATGTTTTTAAAGGGCTATTGTTTTGGTTTTTTGGGCCCCTTTTATATATATATATATATAATCTTTTTAAAAATAATTTAATTTTATTTAACAAATGAAATAACCCTTGCCCTAAATATTTTTTTGGGAAAGCAATTGCATTTGTTTCGCGATTAATGTGCACGATAATTTTTTAGAAGGAATAGTGACTTTCAAAAGAGCGTTGTATTTGTCTCACACACTACCGGTTTCTTTCTTCTACAGCAAAACTGGTCGTGATTCTTGTACTTGTGGGTTTTAGTTTGTTTCAGTTCCTCGATTAATTGTAATTTCTCTCTCTCTCTTTTTTTTTGAAAAAACTATTGTTGGTGATTGAAAAGTATTTTTACAATTTAGTCGTTGTAGGTTGTGAGGACTTACTTCTTATCTTCCCTCCCCCTTTGTAATTACTCTTTTTCACTGGTGAAATGATCTCTTAAAAAGAAAATAAAAAGGAAGCCTCTTTTATTTTTCTTGTTTAAAGTAAAATTGTACATTTCGTTCTTATTGGTAATTAGCATGGGATCCTAAATTTCTTACCCTCTCATTATCGTGAATCGATGGCTATTGAATGTTTTGTTGCTACCCACACACACCCATTTTAGGCAAATCTTATAATACTTCTTTTATTTTATTAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCCTCAGATGCTTCATCAGACGAATGGCTTGAGGTAAGTTCATCGTCCTGTAATTAAACTTGATTAAAATTTGAAGTCGTTTCGTCTCCCCTACTGAGACTGTTATTGTTCCTGTATTTGATAATGCAGGGTACTGCTTATTCTCGGTCATCGTCAAACAAATCAAAGAAAAAGAAGTAGGTCACACTTTCTTCTGCCTTTGCGCTTGATACGTACCAGATATGCAGTTTCTTGTAACTCACTTAAGCATTTGACTTGTTTAAGAGGCGCATCGTGATATCAGTTTTTGGAAAATAGGCCGGTTTAGACTTTTGGAGAAGTTGAGTTATTTCAAATTCGAACCGATGCATACATGATTAGAGATGATAGAAATCTTTTAATTTAATCCTAATGGTAAAATCTTTTAATTTAATCCTAATTTTTTACCATTCACTTCTGAGGTTACTTTTGGATGGATAACTTTTCTTTGTTTATTTTATAGTTACCACCCATTTAGAAATAAGTGTTTTTATGTTTA

mRNA sequence

ATGCATTTCTCTCTGGTTCTATTGCATTTGGTGCTAGAGCTCCGTCCATTTTTCTGTTGGATCTTTTTAAATATTATCTCCTTAGAGCGGGTGCACGAAATTGCTTGGGCAGCGTCTTTAGCGTATCCATATGAACTGTATAAATTAAGGTCGATATTTGGGTTCGTTGAGCGGAGTTTGATCCGCGCGATTCAAGTGTTTTCGTTCTGGTTAATAGCTGGCTTTAGATGTCAATCGGATGCGGATGTGGAATCTGAAGATGCCGCCACTGACGATGCCACTGACTTAGGGATTGTTGCGGAGGATGAGCTAGATTTTGGTGATGGGAGCTTCAGCGCAGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATAGTGGTGGCCGGAGAAGAGACTGAACTATTGGCCGGAGTGAAAAATAATGGGGATTCTAGCTTGAATGTCATTGCAATAAAGGCGAGTGTTCATTACACTTTTGATCATCGATTACTGATTCAAAATCTTACCGCACTGACTTTTAACAATGCATCGGTACCAGCATCGTTACAAGCAACTTTCCCATACCTTTTTGCTGTCAGCAAATATCTTCAGTCTGGGAATTTTGATCTCGTTGGAACCATTATCTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGCTGAAGCTAGTGGTTTTCTCAGCATTGAATCTGTATTTCTAGTTACGCTTGGTATTGCACTTATCGTGCTGCTTGGTTTATGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCCTCAGATGCTTCATCAGACGAATGGCTTGAGGGTACTGCTTATTCTCGGTCATCGTCAAACAAATCAAAGAAAAAGAAGTAGGTCACACTTTCTTCTGCCTTTGCGCTTGATACGTACCAGATATGCAGTTTCTTGTAACTCACTTAAGCATTTGACTTGTTTAAGAGGCGCATCGTGATATCAGTTTTTGGAAAATAGGCCGGTTTAGACTTTTGGAGAAGTTGAGTTATTTCAAATTCGAACCGATGCATACATGATTAGAGATGATAGAAATCTTTTAATTTAATCCTAATGGTAAAATCTTTTAATTTAATCCTAATTTTTTACCATTCACTTCTGAGGTTACTTTTGGATGGATAACTTTTCTTTGTTTATTTTATAGTTACCACCCATTTAGAAATAAGTGTTTTTATGTTTA

Coding sequence (CDS)

ATGCATTTCTCTCTGGTTCTATTGCATTTGGTGCTAGAGCTCCGTCCATTTTTCTGTTGGATCTTTTTAAATATTATCTCCTTAGAGCGGGTGCACGAAATTGCTTGGGCAGCGTCTTTAGCGTATCCATATGAACTGTATAAATTAAGGTCGATATTTGGGTTCGTTGAGCGGAGTTTGATCCGCGCGATTCAAGTGTTTTCGTTCTGGTTAATAGCTGGCTTTAGATGTCAATCGGATGCGGATGTGGAATCTGAAGATGCCGCCACTGACGATGCCACTGACTTAGGGATTGTTGCGGAGGATGAGCTAGATTTTGGTGATGGGAGCTTCAGCGCAGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATAGTGGTGGCCGGAGAAGAGACTGAACTATTGGCCGGAGTGAAAAATAATGGGGATTCTAGCTTGAATGTCATTGCAATAAAGGCGAGTGTTCATTACACTTTTGATCATCGATTACTGATTCAAAATCTTACCGCACTGACTTTTAACAATGCATCGGTACCAGCATCGTTACAAGCAACTTTCCCATACCTTTTTGCTGTCAGCAAATATCTTCAGTCTGGGAATTTTGATCTCGTTGGAACCATTATCTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGCTGAAGCTAGTGGTTTTCTCAGCATTGAATCTGTATTTCTAGTTACGCTTGGTATTGCACTTATCGTGCTGCTTGGTTTATGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCCTCAGATGCTTCATCAGACGAATGGCTTGAGGGTACTGCTTATTCTCGGTCATCGTCAAACAAATCAAAGAAAAAGAAGTAG

Protein sequence

MHFSLVLLHLVLELRPFFCWIFLNIISLERVHEIAWAASLAYPYELYKLRSIFGFVERSLIRAIQVFSFWLIAGFRCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGEETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK

Homology

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BLAST of CcUC02G028420 vs. NCBI nr
Match: XP_038902527.1 (translocon-associated protein subunit alpha [Benincasa hispida])

HSP 1 Score: 429.1 bits (1102), Expect = 3.2e-116
Identity = 224/235 (95.32%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDADVESEDAA DDATDLGIV EDELDFGDGSFSAAPGVDTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDADVESEDAAVDDATDLGIVGEDELDFGDGSFSAAPGVDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETELLAG+KNNGDSSLNVIAIKASVHYTFDHRLLIQNLTA  FNN SVPAS QATFPYLF
Sbjct: 85  ETELLAGIKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTAQAFNNGSVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK SDAS DEWLEGTAYSRSSSNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKTSDASLDEWLEGTAYSRSSSNKSKKKK 259

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BLAST of CcUC02G028420 vs. NCBI nr
Match: XP_008457651.1 (PREDICTED: translocon-associated protein subunit alpha [Cucumis melo] >KAA0045696.1 translocon-associated protein subunit alpha [Cucumis melo var. makuwa] >TYJ99586.1 translocon-associated protein subunit alpha [Cucumis melo var. makuwa])

HSP 1 Score: 411.8 bits (1057), Expect = 5.4e-111
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA+ ESE+A  DDATDLGIV E+ELD+GDGSFSAAPGVDTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETE+LAGVKNNGDSSLNV+AIKASVHYTFDHRLLIQNL+A+TFNNASVPAS QATFPYLF
Sbjct: 85  ETEILAGVKNNGDSSLNVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGT-AYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGT AYS S SNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK 260

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BLAST of CcUC02G028420 vs. NCBI nr
Match: XP_004147020.1 (translocon-associated protein subunit alpha [Cucumis sativus] >KGN61898.1 hypothetical protein Csa_006583 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 1.6e-110
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA+ ESE+AA DDATDLGIV E+ELD+GDGSFSAAPG+DTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDAESESEEAAVDDATDLGIVGEEELDYGDGSFSAAPGIDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETE+LAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNL+A+ FNNASVPAS QATFPYLF
Sbjct: 85  ETEILAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLSAVGFNNASVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGT-AYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGT AYS S SNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK 260

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BLAST of CcUC02G028420 vs. NCBI nr
Match: KAG6605003.1 (Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400.2 bits (1027), Expect = 1.6e-107
Identity = 213/235 (90.64%), Postives = 218/235 (92.77%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA VESE+ A  D TDLG V EDE DFGDGSFS APGVDTVCVFPKNSARIVVAGE
Sbjct: 25  RCQSDASVESEE-AVKDITDLGTVGEDEQDFGDGSFSPAPGVDTVCVFPKNSARIVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           E ELLAGVKN+GDSSLNVIAIKASVHYTFDHR+LIQNLTA  FNNASVPAS QATFPY F
Sbjct: 85  EAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQPFNNASVPASSQATFPYFF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQ GNFDLVGTIIYE+DQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDAS DEWLEGTAYS+SSSNK KKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGTAYSQSSSNKLKKKK 258

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BLAST of CcUC02G028420 vs. NCBI nr
Match: XP_022946984.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG7035036.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.1 bits (1024), Expect = 3.6e-107
Identity = 212/235 (90.21%), Postives = 218/235 (92.77%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA VESE+ A  D TDLG V EDE DFGDGSFS APGVDTVCVFPKNSARIVVAGE
Sbjct: 25  RCQSDASVESEE-AVKDITDLGTVGEDEQDFGDGSFSPAPGVDTVCVFPKNSARIVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           E ELLAGVKN+GDSSLNVIAIKASVHYTFDHR+LIQNLTA  FNNASVPAS QATFPY F
Sbjct: 85  EAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQPFNNASVPASSQATFPYFF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQ GNFDLVGTIIYE+DQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIAL+V
Sbjct: 145 AVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALMV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDAS DEWLEGTAYS+SSSNK KKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGTAYSQSSSNKLKKKK 258

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BLAST of CcUC02G028420 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-72
Identity = 148/255 (58.04%), Postives = 191/255 (74.90%), Query Frame = 0


Query: 58  RSLIRAIQVFSFWLIAGFRCQSDADVESE--DAATDDATDLGIVAEDELDFGDGSFSAAP 117
           R L  A+ + +  L+   RCQSDA+  S   D    + TD   V ED+ D  D + S+ P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 118 GVDTVCVFPKNSARIVVAGEETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTA 177
           GV+TVCVFPKNSA++V AGEETELL G+KN G + + V+ I+ASVH  +DH+LL+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 178 LTFNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEA 237
           L  NNAS+P SLQATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 238 SGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEG 297
            G LS ESVFL+TLGI L++LLGLW + Q+Q L+KKTK+  KVEVGT++++AS DEWLEG
Sbjct: 185 GGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEG 244

Query: 298 TAYSRSSSNKSKKKK 311
           T  +++SS K+K KK
Sbjct: 245 TTLAKTSSGKTKNKK 257

[Close]

BLAST of CcUC02G028420 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16
Identity = 69/223 (30.94%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 96  LGIVAEDELDFGDGSFSAAPGVDTVC---VFPKNSARIVVAGEETELLAGVKNNGDSSLN 155
           +  V  D+++  D     A     V    +FP N  +   AG   E+L G  NN D +LN
Sbjct: 15  ISCVYSDDVEITDDEVVQATPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALN 74

Query: 156 VIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTI 215
           +  I AS+++  D  + IQN T   F  A V     AT  Y F  S+YL+   F L+ ++
Sbjct: 75  ITHIFASLNHPQDFSVFIQNYTRGDFGIA-VEKGHHATLAYRFVPSEYLEPREFGLLISL 134

Query: 216 IYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIVLLGLWIHG------QIQ 275
            Y+     +  TFFN TI + E      ++S FL+ LG+  +  +G  ++G      +++
Sbjct: 135 EYQDGAQNFTQTFFNSTINITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPKQKKVR 194

Query: 276 NLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKK 310
            +SK  K A +VE     ++  + EWL GT+ + SS  KS +K
Sbjct: 195 TVSKVNKNAVRVE-----TEDETAEWLSGTS-AASSKVKSVQK 230

[Close]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL
Match: A0A5A7TU84 (Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001580 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.6e-111
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA+ ESE+A  DDATDLGIV E+ELD+GDGSFSAAPGVDTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETE+LAGVKNNGDSSLNV+AIKASVHYTFDHRLLIQNL+A+TFNNASVPAS QATFPYLF
Sbjct: 85  ETEILAGVKNNGDSSLNVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGT-AYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGT AYS S SNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK 260

[Close]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL
Match: A0A1S3C642 (Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103497301 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.6e-111
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA+ ESE+A  DDATDLGIV E+ELD+GDGSFSAAPGVDTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETE+LAGVKNNGDSSLNV+AIKASVHYTFDHRLLIQNL+A+TFNNASVPAS QATFPYLF
Sbjct: 85  ETEILAGVKNNGDSSLNVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGT-AYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGT AYS S SNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK 260

[Close]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL
Match: A0A0A0LJC2 (Signal sequence receptor subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_2G263930 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 7.6e-111
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA+ ESE+AA DDATDLGIV E+ELD+GDGSFSAAPG+DTVCVFPKNSAR+VVAGE
Sbjct: 25  RCQSDAESESEEAAVDDATDLGIVGEEELDYGDGSFSAAPGIDTVCVFPKNSARLVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           ETE+LAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNL+A+ FNNASVPAS QATFPYLF
Sbjct: 85  ETEILAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLSAVGFNNASVPASSQATFPYLF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGIALIV
Sbjct: 145 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGT-AYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGT AYS S SNKSKKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK 260

[Close]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL
Match: A0A6J1G5G5 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111451000 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.7e-107
Identity = 212/235 (90.21%), Postives = 218/235 (92.77%), Query Frame = 0


Query: 76  RCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGE 135
           RCQSDA VESE+ A  D TDLG V EDE DFGDGSFS APGVDTVCVFPKNSARIVVAGE
Sbjct: 25  RCQSDASVESEE-AVKDITDLGTVGEDEQDFGDGSFSPAPGVDTVCVFPKNSARIVVAGE 84

Query: 136 ETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLF 195
           E ELLAGVKN+GDSSLNVIAIKASVHYTFDHR+LIQNLTA  FNNASVPAS QATFPY F
Sbjct: 85  EAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQPFNNASVPASSQATFPYFF 144

Query: 196 AVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIV 255
           AVSKYLQ GNFDLVGTIIYE+DQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIAL+V
Sbjct: 145 AVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALMV 204

Query: 256 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK 311
           LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDAS DEWLEGTAYS+SSSNK KKKK
Sbjct: 205 LLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL
Match: A0A6J1CWQ9 (Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC111015499 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 8.6e-107
Identity = 211/253 (83.40%), Postives = 227/253 (89.72%), Query Frame = 0


Query: 58  RSLIRAIQVFSFWLIAGFRCQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGV 117
           R L  A+ + +  ++   RCQSDADVE ED A +D TDLGIV EDE D+GDGSFS A GV
Sbjct: 7   RILFLALLLLASPVLQVVRCQSDADVEYED-AVEDVTDLGIVGEDEQDYGDGSFSPAQGV 66

Query: 118 DTVCVFPKNSARIVVAGEETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALT 177
           DTVCVFPKNSARIVVAGEETELLAG+KN+GDSSLNVIAIKASVHYTFDHR++IQNL+A  
Sbjct: 67  DTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQNLSAQG 126

Query: 178 FNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASG 237
           FNNASVPAS QATFPY F VS++LQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV EA G
Sbjct: 127 FNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAGG 186

Query: 238 FLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTA 297
           FLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDAS DEWLEGTA
Sbjct: 187 FLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTA 246

Query: 298 YSRSSSNKSKKKK 311
           YS+SSSNKSKKKK
Sbjct: 247 YSQSSSNKSKKKK 258

[Close]

BLAST of CcUC02G028420 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-73
Identity = 148/255 (58.04%), Postives = 191/255 (74.90%), Query Frame = 0


Query: 58  RSLIRAIQVFSFWLIAGFRCQSDADVESE--DAATDDATDLGIVAEDELDFGDGSFSAAP 117
           R L  A+ + +  L+   RCQSDA+  S   D    + TD   V ED+ D  D + S+ P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 118 GVDTVCVFPKNSARIVVAGEETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTA 177
           GV+TVCVFPKNSA++V AGEETELL G+KN G + + V+ I+ASVH  +DH+LL+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 178 LTFNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEA 237
           L  NNAS+P SLQATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 238 SGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEG 297
            G LS ESVFL+TLGI L++LLGLW + Q+Q L+KKTK+  KVEVGT++++AS DEWLEG
Sbjct: 185 GGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEG 244

Query: 298 TAYSRSSSNKSKKKK 311
           T  +++SS K+K KK
Sbjct: 245 TTLAKTSSGKTKNKK 257

[Close]

BLAST of CcUC02G028420 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-63
Identity = 133/234 (56.84%), Postives = 172/234 (73.50%), Query Frame = 0


Query: 77  CQSDADVESEDAATDDATDLGIVAEDELDFGDGSFSAAPGVDTVCVFPKNSARIVVAGEE 136
           CQSD    SED+   + +D+G    D  +      ++APG++T+CVFPKNSA+I+ AG E
Sbjct: 25  CQSD----SEDSGF-EVSDVGEEESDAEEVFGLELTSAPGIETLCVFPKNSAKIIKAGVE 84

Query: 137 TELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTALTFNNASVPASLQATFPYLFA 196
           TELL G+KN+G S+++++A+K S+H  FD    +QNLTAL+F+NASVP S QAT PY FA
Sbjct: 85  TELLVGMKNDGQSNVDIVAVKGSLHLPFDQN-AVQNLTALSFSNASVPTSAQATLPYAFA 144

Query: 197 VSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIVL 256
           VSK+LQ+G FD VGTIIYEID  PYQS F+NGTIEV E      +ESVFL  L I +I  
Sbjct: 145 VSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVVEDGPLFRMESVFLSGLLIFVIAF 204

Query: 257 LGLWIHGQIQNLSKKTKRAPKVEVGTKASDASSDEWLEGTAYSRSSSNKSKKKK 311
           L ++I   +++++KKTKRAPKVEVGT   DAS DEWLEGT+Y++SSS KSKKKK
Sbjct: 205 LAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWLEGTSYTQSSS-KSKKKK 251

[Close]

BLAST of CcUC02G028420 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 104/184 (56.52%), Postives = 132/184 (71.74%), Query Frame = 0


Query: 58  RSLIRAIQVFSFWLIAGFRCQSDADVESE--DAATDDATDLGIVAEDELDFGDGSFSAAP 117
           R L  A+ + +  L+   RCQSDA+  S   D    + TD   V ED+ D  D + S+ P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 118 GVDTVCVFPKNSARIVVAGEETELLAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQNLTA 177
           GV+TVCVFPKNSA++V AGEETELL G+KN G + + V+ I+ASVH  +DH+LL+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 178 LTFNNASVPASLQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEVAEA 237
           L  NNAS+P SLQATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 238 SGFL 240
            G L
Sbjct: 185 GGNL 186

The following BLAST results are available for this feature:

BLAST of CcUC02G028420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902527.1	3.2e-116	95.32	translocon-associated protein subunit alpha [Benincasa hispida]	[more]
XP_008457651.1	5.4e-111	91.10	PREDICTED: translocon-associated protein subunit alpha [Cucumis melo] >KAA004569...	[more]
XP_004147020.1	1.6e-110	91.10	translocon-associated protein subunit alpha [Cucumis sativus] >KGN61898.1 hypoth...	[more]
KAG6605003.1	1.6e-107	90.64	Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma sub...	[more]
XP_022946984.1	3.6e-107	90.21	translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG703503...	[more]

BLAST of CcUC02G028420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45434	3.9e-72	58.04	Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q54R45	1.0e-16	30.94	Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of CcUC02G028420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU84	2.6e-111	91.10	Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C642	2.6e-111	91.10	Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103497301 P...	[more]
A0A0A0LJC2	7.6e-111	91.10	Signal sequence receptor subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_2G26393...	[more]
A0A6J1G5G5	1.7e-107	90.21	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CWQ9	8.6e-107	83.40	Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CcUC02G028420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21160.1	2.8e-73	58.04	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G16595.1	3.4e-63	56.84	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G21160.2	1.8e-48	56.52	Translocon-associated protein (TRAP), alpha subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005595	Translocon-associated protein (TRAP), alpha subunit	PFAM	PF03896	TRAP_alpha	coord: 81..295 e-value: 7.0E-29 score: 100.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..310
None	No IPR available	PANTHER	PTHR12924	TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT	coord: 71..310
None	No IPR available	PANTHER	PTHR12924:SF5	SUBFAMILY NOT NAMED	coord: 71..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G028420.1	CcUC02G028420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane