CcUC02G026750 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G026750
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Thymidine kinase
Location	CicolChr02: 13653817 .. 13655352 (-)
RNA-Seq Expression	CcUC02G026750
Synteny	CcUC02G026750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGGAGAAGCCAAAGGTTATTGAAAAGTCAAAACTTCTTGAACAAGCTTCCCTCCAAATCTCCAACTCTTTCAACATTCCCTCCAAAATTTCAAAACCCCCATGAAAAATTCAAACCCACGACTCCCATTTTTGGTTCCTTTTCGCTCTTCTATATATTTTCAAGAAGGAAACCCAAGATCTTATCACAGATCGCTTCAATCTTCTTCAAAATTGCCTCTGATTTCAATTCGAATTTTGCCCTACTTTTCTTTTTCTTTCGTCTTCAATCTTCTCCATGGAGTCTTGCAGGAGTTCGTTTTCGTTGACCTCCTCCAACGGCGCCGCCGTTAGAGCAGAATCTTCTCACCGCCTCGCTGGCGAAGTCCATGTGATCATCGGCCCCATGTTTGCTGGGAAAACCACCGCGCTCCTCCGCCGGATCAAGTCTGAGAGCAACAGTGGCAGGTAAAGAAAATTCCCTTTTTAAGGGTTAATTCAATTGTTGTTATTGCGATCTGCAAACAGATCCAATTCTCTCAACTTGAAGTGGTAAACAGATGGAATTCTCCCCACAAAAAAGTATCGCTGTAACTATTTTTTTTTTTTTTTCCTGGTTGTGAATTGACTGATCCAATTGATGTAGAAATTGATCATGGATTGGATTTCTATCTTCTTCTCTGCTTTTATTTTCAGTGGAATTCTGTATTTGATTAGTTATATGATGAGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGATACAAGGTACGCAATAGATTCAGTAGTAACACATGATGGGGCCAAATTTCCGTGCTGGGCACTGCCAGATCTTTCTTGTTTCCGAAAGAAATTTGGAGAAGATGCTTATAATGAGGTGTAACTTTTGTTTGAAGAATCATTGTATTAGTCTACTATTAGTATGGCGAATTCATCTTGTTTCTCACTCCTTAATAATACCGGCAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTTGACGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTGTGGTTGCTGGGTTAGATGGAGATTACCTGAGGTATTAAACATTTACATAATATCTTGAAAATTGAGGAACCCAGATGTGAAATTGTTGATCTTTCAAATTCTAATGTGGTGGGTTTTCAATGGTTTTTGGCAGGAGAAGCTTTGGTTCAGTGCTTGATGTTATTCCTCTGGCTGACACAGTAACAAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCTTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACTGAGCTTATCGCTGGGGCCGATGTATATATGCCGGTGTGCCGCCACCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCATGGGATCTCCAACTATTAGAATTGGCTCAAATCTAGAGGCACGCACTTCACTTAACTAATATTAAAATCCACTACTCATTATATTTTTCCTTTCTAGACAATGCTTTGGTTTTCGCATGTGTATTTCCATATGTTTCCATCAAACAC

mRNA sequence

ATTTAGGAGAAGCCAAAGGTTATTGAAAAGTCAAAACTTCTTGAACAAGCTTCCCTCCAAATCTCCAACTCTTTCAACATTCCCTCCAAAATTTCAAAACCCCCATGAAAAATTCAAACCCACGACTCCCATTTTTGGTTCCTTTTCGCTCTTCTATATATTTTCAAGAAGGAAACCCAAGATCTTATCACAGATCGCTTCAATCTTCTTCAAAATTGCCTCTGATTTCAATTCGAATTTTGCCCTACTTTTCTTTTTCTTTCGTCTTCAATCTTCTCCATGGAGTCTTGCAGGAGTTCGTTTTCGTTGACCTCCTCCAACGGCGCCGCCGTTAGAGCAGAATCTTCTCACCGCCTCGCTGGCGAAGTCCATGTGATCATCGGCCCCATGTTTGCTGGGAAAACCACCGCGCTCCTCCGCCGGATCAAGTCTGAGAGCAACAGTGGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGATACAAGGTACGCAATAGATTCAGTAGTAACACATGATGGGGCCAAATTTCCGTGCTGGGCACTGCCAGATCTTTCTTGTTTCCGAAAGAAATTTGGAGAAGATGCTTATAATGAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTTGACGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTGTGGTTGCTGGGTTAGATGGAGATTACCTGAGGAGAAGCTTTGGTTCAGTGCTTGATGTTATTCCTCTGGCTGACACAGTAACAAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCTTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACTGAGCTTATCGCTGGGGCCGATGTATATATGCCGGTGTGCCGCCACCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCATGGGATCTCCAACTATTAGAATTGGCTCAAATCTAGAGGCACGCACTTCACTTAACTAATATTAAAATCCACTACTCATTATATTTTTCCTTTCTAGACAATGCTTTGGTTTTCGCATGTGTATTTCCATATGTTTCCATCAAACAC

Coding sequence (CDS)

ATGGAGTCTTGCAGGAGTTCGTTTTCGTTGACCTCCTCCAACGGCGCCGCCGTTAGAGCAGAATCTTCTCACCGCCTCGCTGGCGAAGTCCATGTGATCATCGGCCCCATGTTTGCTGGGAAAACCACCGCGCTCCTCCGCCGGATCAAGTCTGAGAGCAACAGTGGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGATACAAGGTACGCAATAGATTCAGTAGTAACACATGATGGGGCCAAATTTCCGTGCTGGGCACTGCCAGATCTTTCTTGTTTCCGAAAGAAATTTGGAGAAGATGCTTATAATGAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTTGACGATCTCTATGATTTTTGCTGCAATGTTGCTGATAAAGATGGCAAAATCATTGTGGTTGCTGGGTTAGATGGAGATTACCTGAGGAGAAGCTTTGGTTCAGTGCTTGATGTTATTCCTCTGGCTGACACAGTAACAAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCTTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACTGAGCTTATCGCTGGGGCCGATGTATATATGCCGGTGTGCCGCCACCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATGTCATGGGATCTCCAACTATTAGAATTGGCTCAAATCTAGAGGCACGCACTTCACTTAACTAA

Protein sequence

MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSLN

Homology

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BLAST of CcUC02G026750 vs. NCBI nr
Match: XP_038901065.1 (thymidine kinase isoform X1 [Benincasa hispida])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 223/236 (94.49%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MESCRSSFSLTSSN A VRAESSH LAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV
Sbjct: 1   MESCRSSFSLTSSNDAVVRAESSHCLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEET TELIAGADVYMPVCR HYANGQEVIQSSKNV+GS TIR GSNLEA  SL
Sbjct: 181 RKTEETETELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLEALPSL 236

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BLAST of CcUC02G026750 vs. NCBI nr
Match: XP_038901066.1 (thymidine kinase isoform X2 [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119
Identity = 220/231 (95.24%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MESCRSSFSLTSSN A VRAESSH LAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV
Sbjct: 1   MESCRSSFSLTSSNDAVVRAESSHCLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLE 232
           RKTEET TELIAGADVYMPVCR HYANGQEVIQSSKNV+GS TIR GSNLE
Sbjct: 181 RKTEETETELIAGADVYMPVCRQHYANGQEVIQSSKNVLGSRTIRTGSNLE 231

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BLAST of CcUC02G026750 vs. NCBI nr
Match: XP_008464186.1 (PREDICTED: thymidine kinase [Cucumis melo] >TYK11901.1 thymidine kinase [Cucumis melo var. makuwa])

HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116
Identity = 215/236 (91.10%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MESCRSS SLTSSN  A+R ESSHRL GEVHVIIGPMFAGKTTALLRRIKS SNSGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDGAKFPCWALP LS FR+KFGEDAYNELDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVAD+DGKIIVVAGLDGDYLRRSFGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKNVMGS T  I SNLEA  SL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRT--IASNLEALPSL 234

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BLAST of CcUC02G026750 vs. NCBI nr
Match: XP_023513380.1 (thymidine kinase a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.2 bits (1097), Expect = 9.4e-116
Identity = 210/236 (88.98%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MES R+SFSLTS++G AV A S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLTSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKDGKII+VAGLDGDYLRR FGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKN++GS  +R GSNLEA  SL
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSL 236

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BLAST of CcUC02G026750 vs. NCBI nr
Match: KAG7010772.1 (Thymidine kinase a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.5 bits (1090), Expect = 6.1e-115
Identity = 209/236 (88.56%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MES R+SFSLTS++G AV A S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLTSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKD KII+VAGLDGDYLRR FGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDDKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKN++GS  +R GSNLEA  SL
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSL 236

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BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot
Match: O81263 (Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2)

HSP 1 Score: 311.2 bits (796), Expect = 9.9e-84
Identity = 145/206 (70.39%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 15  GAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSG-RNVVMIKSSKDTRYAID 74
           G+A+ A+ S+   GE+HVI+GPMFAGKTTALLRR++ E+ +G RNV +IKS KD RY +D
Sbjct: 56  GSAMEAQPSY--PGEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLD 115

Query: 75  SVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADKDGK 134
           SVVTHDG K PCWALP+LS F+ K G +AY+++DVIG+DEAQFFDDL+DFCC  AD+DGK
Sbjct: 116 SVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGK 175

Query: 135 IIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAG 194
           I+VVAGLDGDY R  FGSVLD+IPLAD+VTKLTARCELCG+RAFFTLRKT ET+TELI G
Sbjct: 176 IVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGG 235

Query: 195 ADVYMPVCRHHYANGQEVIQSSKNVM 220
           ADVYMPVCR HY +GQ VI++++ V+
Sbjct: 236 ADVYMPVCRQHYLDGQIVIEATRIVL 259

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BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot
Match: Q9S750 (Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-82
Identity = 150/222 (67.57%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MESCRSSF---SLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGR 60
           M + ++SF   +L S       ++   R +G VHVI+GPMF+GK+T+LLRRIKSE + GR
Sbjct: 1   MATLKASFLIKTLDSDVTGDFLSDLERRGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGR 60

Query: 61  NVVMIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFF 120
           +V M+KSSKDTRYA DSVVTHDG  FPCWALPDL  F +KFG DAYN+LDVIG+DEAQFF
Sbjct: 61  SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120

Query: 121 DDLYDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAF 180
            DLY+FCC VAD DGKI++VAGLDGDYLRRSFG+VLD+IP+AD+VTKLTARCE+CG +AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180

Query: 181 FTLRKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVM 220
           FTLRK  +TRTELI GADVYMPVCR HY     VI++SK V+
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVL 222

[Close]

BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot
Match: F4KBF5 (Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-77
Identity = 134/213 (62.91%), Postives = 174/213 (81.69%), Query Frame = 0


Query: 10  LTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTR 69
           +TSS+ +   + SS    GE+HV++GPMF+GKTT LLRRI +E  +G+ + +IKS+KDTR
Sbjct: 62  VTSSSSSQPLSSSS---PGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTR 121

Query: 70  YAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAY-NELDVIGVDEAQFFDDLYDFCCNVA 129
           Y  +S+VTHDG K+PCW+LPDLS F+++FG D Y N LDVIG+DEAQFF DLY+FC   A
Sbjct: 122 YCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAA 181

Query: 130 DKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRT 189
           DK+GK ++VAGLDGD++RR FGSVLD+IP+ADTVTKLT+RCE+CGKRA FT+RKTEE  T
Sbjct: 182 DKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKET 241

Query: 190 ELIAGADVYMPVCRHHYANGQEVIQSSKNVMGS 222
           ELI GA+VYMPVCR HY  GQ V+++++ V+ S
Sbjct: 242 ELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

[Close]

BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot
Match: P23335 (Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.7e-36
Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 28  GEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGAKFPCWA 87
           G +H+I+GPMF+GK+T L+R +     +  N  +IK SKD RY  D+V THD  K    A
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHD--KCYISA 63

Query: 88  LPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADKDGKIIVVAGLDGDYLRR 147
           +   S F  K   D  +++D++G+DE QFF+D+ +FC  +A+K GKI++VA LDG Y R+
Sbjct: 64  VSTDSLFDIK---DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 123

Query: 148 SFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHHY 206
            FG++L++IPL++ VTKL A C +C + A F+ R ++E   ELI G + Y+ VCR  Y
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCY 175

[Close]

BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot
Match: Q27564 (Thymidine kinase 1 OS=Dictyostelium discoideum OX=44689 GN=thyB PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-34
Identity = 87/199 (43.72%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 25  RLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRY--AIDS--VVTHDG 84
           ++AG++ VI GPMF+GKTT L+RRIK  + + +  ++IK SKDTRY   ID   +VTHD 
Sbjct: 5   QIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDK 64

Query: 85  AK---FPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADKDGKIIVV 144
                FPC  L D+        E A N  DVIG+DE QFF D+  F  ++A++ GK +++
Sbjct: 65  QNYQAFPCSILEDVK-------EQAQN-YDVIGIDEGQFFPDVVQFSEDLANQ-GKTVII 124

Query: 145 AGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVY 204
           A LDG + R+ F SV+D++  A+ +TKLTA C +C   A F+ R  E    ELI G D Y
Sbjct: 125 AALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGIDKY 184

Query: 205 MPVCRHHYANGQEVIQSSK 217
           + VCR  Y + Q    S+K
Sbjct: 185 ISVCRGCYNSDQNEGNSTK 194

[Close]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL
Match: A0A5D3CJB6 (Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00640 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 215/236 (91.10%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MESCRSS SLTSSN  A+R ESSHRL GEVHVIIGPMFAGKTTALLRRIKS SNSGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDGAKFPCWALP LS FR+KFGEDAYNELDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVAD+DGKIIVVAGLDGDYLRRSFGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKNVMGS T  I SNLEA  SL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRT--IASNLEALPSL 234

[Close]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL
Match: A0A1S3CKW8 (Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103502126 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 215/236 (91.10%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MESCRSS SLTSSN  A+R ESSHRL GEVHVIIGPMFAGKTTALLRRIKS SNSGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDGAKFPCWALP LS FR+KFGEDAYNELDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVAD+DGKIIVVAGLDGDYLRRSFGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKNVMGS T  I SNLEA  SL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRT--IASNLEALPSL 234

[Close]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL
Match: A0A5A7TX27 (Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005900 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.6e-115
Identity = 215/237 (90.72%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSG-RNV 60
           MESCRSS SLTSSN  A+R ESSHRL GEVHVIIGPMFAGKTTALLRRIKS SNSG RNV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGNRNV 60

Query: 61  VMIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDD 120
           VMIKSSKDTRYA+DSVVTHDGAKFPCWALP LS FR+KFGEDAYNELDVIGVDEAQFFDD
Sbjct: 61  VMIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDD 120

Query: 121 LYDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFT 180
           LYDFCCNVAD+DGKIIVVAGLDGDYLRRSFGSVLDV+PLADTVTKLTARCELCGKRAFFT
Sbjct: 121 LYDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFT 180

Query: 181 LRKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           LRKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKNVMGS TI   SNLEA  SL
Sbjct: 181 LRKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRTIT--SNLEALPSL 235

[Close]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL
Match: A0A6J1FYC7 (Thymidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111448484 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 208/236 (88.14%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           MES R+SFSL S++G AV A S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESLRNSFSLISTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VADKD KII+VAGLDGDYLRR FGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCDVADKDSKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSL 237
           RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKN++GS  +R GSNLEA  SL
Sbjct: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSL 236

[Close]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL
Match: A0A6J1CH59 (Thymidine kinase OS=Momordica charantia OX=3673 GN=LOC111011151 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 208/237 (87.76%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MESCRSSFSLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60
           M+S RSS SLT+++G  VRA S  R+AGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV
Sbjct: 1   MDSFRSSLSLTTTDGGTVRAGSYPRVAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFFDDL 120
           MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLS FR+KFGEDAY++LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYDKLDVIGVDEAQFFDDL 120

Query: 121 YDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTL 180
           YDFCCNVADKDGKI++VAGLDGDYLRRSFGSVLDV+PLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADKDGKIVIVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVMGSPTIRIGSNLEARTSLN 238
           RKTEETRTELIAGADVYMPVCR HYANGQ+VIQ+SKNV+GS T+  GSNLEA  SLN
Sbjct: 181 RKTEETRTELIAGADVYMPVCRQHYANGQQVIQASKNVLGSRTVTTGSNLEALASLN 237

[Close]

BLAST of CcUC02G026750 vs. TAIR 10
Match: AT3G07800.1 (Thymidine kinase )

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-83
Identity = 150/222 (67.57%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MESCRSSF---SLTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGR 60
           M + ++SF   +L S       ++   R +G VHVI+GPMF+GK+T+LLRRIKSE + GR
Sbjct: 1   MATLKASFLIKTLDSDVTGDFLSDLERRGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGR 60

Query: 61  NVVMIKSSKDTRYAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAYNELDVIGVDEAQFF 120
           +V M+KSSKDTRYA DSVVTHDG  FPCWALPDL  F +KFG DAYN+LDVIG+DEAQFF
Sbjct: 61  SVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFF 120

Query: 121 DDLYDFCCNVADKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAF 180
            DLY+FCC VAD DGKI++VAGLDGDYLRRSFG+VLD+IP+AD+VTKLTARCE+CG +AF
Sbjct: 121 GDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLTARCEVCGHKAF 180

Query: 181 FTLRKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNVM 220
           FTLRK  +TRTELI GADVYMPVCR HY     VI++SK V+
Sbjct: 181 FTLRKNCDTRTELIGGADVYMPVCRKHYITNHIVIKASKKVL 222

[Close]

BLAST of CcUC02G026750 vs. TAIR 10
Match: AT5G23070.1 (Thymidine kinase )

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-78
Identity = 134/213 (62.91%), Postives = 174/213 (81.69%), Query Frame = 0


Query: 10  LTSSNGAAVRAESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTR 69
           +TSS+ +   + SS    GE+HV++GPMF+GKTT LLRRI +E  +G+ + +IKS+KDTR
Sbjct: 62  VTSSSSSQPLSSSS---PGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTR 121

Query: 70  YAIDSVVTHDGAKFPCWALPDLSCFRKKFGEDAY-NELDVIGVDEAQFFDDLYDFCCNVA 129
           Y  +S+VTHDG K+PCW+LPDLS F+++FG D Y N LDVIG+DEAQFF DLY+FC   A
Sbjct: 122 YCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAA 181

Query: 130 DKDGKIIVVAGLDGDYLRRSFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTEETRT 189
           DK+GK ++VAGLDGD++RR FGSVLD+IP+ADTVTKLT+RCE+CGKRA FT+RKTEE  T
Sbjct: 182 DKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKET 241

Query: 190 ELIAGADVYMPVCRHHYANGQEVIQSSKNVMGS 222
           ELI GA+VYMPVCR HY  GQ V+++++ V+ S
Sbjct: 242 ELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

The following BLAST results are available for this feature:

BLAST of CcUC02G026750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901065.1	1.3e-120	94.49	thymidine kinase isoform X1 [Benincasa hispida]	[more]
XP_038901066.1	1.1e-119	95.24	thymidine kinase isoform X2 [Benincasa hispida]	[more]
XP_008464186.1	4.2e-116	91.10	PREDICTED: thymidine kinase [Cucumis melo] >TYK11901.1 thymidine kinase [Cucumis...	[more]
XP_023513380.1	9.4e-116	88.98	thymidine kinase a [Cucurbita pepo subsp. pepo]	[more]
KAG7010772.1	6.1e-115	88.56	Thymidine kinase a [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC02G026750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81263	9.9e-84	70.39	Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2	[more]
Q9S750	1.4e-82	67.57	Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1	[more]
F4KBF5	1.8e-77	62.91	Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1	[more]
P23335	7.7e-36	44.38	Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1	[more]
Q27564	5.5e-34	43.72	Thymidine kinase 1 OS=Dictyostelium discoideum OX=44689 GN=thyB PE=1 SV=1	[more]

BLAST of CcUC02G026750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJB6	2.1e-116	91.10	Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G006...	[more]
A0A1S3CKW8	2.1e-116	91.10	Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103502126 PE=3 SV=1	[more]
A0A5A7TX27	6.6e-115	90.72	Thymidine kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005...	[more]
A0A6J1FYC7	1.1e-114	88.14	Thymidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111448484 PE=3 SV=1	[more]
A0A6J1CH59	1.9e-114	87.76	Thymidine kinase OS=Momordica charantia OX=3673 GN=LOC111011151 PE=3 SV=1	[more]

BLAST of CcUC02G026750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07800.1	1.0e-83	67.57	Thymidine kinase	[more]
AT5G23070.1	1.3e-78	62.91	Thymidine kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001267	Thymidine kinase	PFAM	PF00265	TK	coord: 28..205 e-value: 3.8E-52 score: 176.7
IPR001267	Thymidine kinase	PANTHER	PTHR11441	THYMIDINE KINASE	coord: 5..225
None	No IPR available	GENE3D	3.30.60.20		coord: 166..207 e-value: 1.3E-15 score: 59.4
None	No IPR available	PANTHER	PTHR11441:SF8	THYMIDINE KINASE B	coord: 5..225
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 166..208
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 22..165 e-value: 2.6E-45 score: 155.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..166
IPR020633	Thymidine kinase, conserved site	PROSITE	PS00603	TK_CELLULAR_TYPE	coord: 192..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G026750.1	CcUC02G026750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0046104	thymidine metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity