CcUC02G026440 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G026440
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr02: 12604158 .. 12606127 (+)
RNA-Seq ExpressionCcUC02G026440
SyntenyCcUC02G026440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCTCCGATTCTTACTAGCATGAATATTGGAAGAACAAAGAGTTCTTTATTGTTACTCAATTTTCATCAATTTTTGCGGCAGTATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAGAACATTGAAGCTGTAGTTGAATCAAAGTCGTATGAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTATTTCTCTCCACTTTTCCTGCTAACTTAAGAACACAAGTTGTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTCAAGATCCCAGTTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCGTTTCCCCTCTCTCTTCCAGTCCTTCAGAGGATTCTTCACTCTGGTTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGCCAGTCTAAGTCTGTTGCTAATATCTTGATGGATATGCGGTCAATTGGCTACAAGCCTGACAGCAACATATGTAACTTTCTTATATCCTCTCTTTGTGCCATTGATGAATTAGCAGAGGCTTTTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGGACCTTGATTAGTGCAGCAACAGCTCTTAGGCGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAACATTGTGGCTGCTTTACGAGCAAACCGAGAGGTAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTATCGCGAGTATATGTTAGCGGGAAAGGTGGCCATGAGGATGACAGAGAGAGGGTTTATACCATATATCAAGGTAAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGAGAACCGGAACTTGCTTCTGCTGTAAGGCGCAGATTTGTAGAGTTGAGGTCTTAGATACTATTAATTCTTTATATCTTTATTCTCAAATATATATTCTGAATCCGAATGGTCTGTGGGGAAGATTTAGAGAAAGGTTTTTCACGATAAATACTCATTGAATAAGTTTAAATTTTATTATGCTCGAATCCTCACTTTTCTTTCAACTTTCGTTGCTCATACATAATAACCTTTTACTAATTCTTATTGCATCACCGGATAATATAATTTAGTGGACATAAAAATCTGCATATAATTTATAATCGGTAAATTCAATTTCTTCACTTCTGAAGATAGACAAGATGAATTAACAGCAGGAAGTATGCTCAGTCTTTGATTGGGTAGCTAGCCATCATAGCTATGCCACAAGTACCTCGCTTGTCGGTTGAATCACGTTTCATTCTTATGTAACCAGATTCACCCCAGTCAGTCCCCCATGAATTCTTGACAAGCCAATAAGTTTTATTGCTAGCTTCCCCATACCCAACTATTGCCACTCCATGATTGAGTTGCTTCCCACAATTGCCTGAGAAGACTCCACCTGAATAGAACTGAAAATCATATCCCCCTGCATCAATTGCTACAGAGACTGGCTGGTTAGCAACTGCTGCTTTTAAGCTTTTCTCATCATTGACGGGTACTTTTTCATATCCACTTATTGTCACAGTGCGGTATCTCACTTTTTGTTTGTTGCATACAGATTCAATTCCCCTGTATGGATATTCTATTTCTGTAGTGAGTCCCGTTTTCTTGATGAACTCAAATGCTTTGTACATGTAACCACCATTGCATCCCTGGTTCCCCGATGCCACATCGCAGTCCACAAGCTCTTGTTCTGATAGAGACATCAATTTGCCTGTTTTAATTTTGTTGATGCCTTCCACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCCTGTGTCAAAAAATCAAAAC

mRNA sequence

ACCCTCCGATTCTTACTAGCATGAATATTGGAAGAACAAAGAGTTCTTTATTGTTACTCAATTTTCATCAATTTTTGCGGCAGTATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAGAACATTGAAGCTGTAGTTGAATCAAAGTCGTATGAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTATTTCTCTCCACTTTTCCTGCTAACTTAAGAACACAAGTTGTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTCAAGATCCCAGTTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCGTTTCCCCTCTCTCTTCCAGTCCTTCAGAGGATTCTTCACTCTGGTTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGCCAGTCTAAGTCTGTTGCTAATATCTTGATGGATATGCGGTCAATTGGCTACAAGCCTGACAGCAACATATGTAACTTTCTTATATCCTCTCTTTGTGCCATTGATGAATTAGCAGAGGCTTTTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGGACCTTGATTAGTGCAGCAACAGCTCTTAGGCGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAACATTGTGGCTGCTTTACGAGCAAACCGAGAGGTAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTATCGCGAGTATATGTTAGCGGGAAAGGTGGCCATGAGGATGACAGAGAGAGGGTTTATACCATATATCAAGGTAAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGAGAACCGGAACTTGCTTCTGCTGTAAGGCGCAGATTTGTAGAGTTGAGATTCAATTCCCCTGTATGGATATTCTATTTCTGTAGTGAGTCCCGTTTTCTTGATGAACTCAAATGCTTTGTACATGTAACCACCATTGCATCCCTGGTTCCCCGATGCCACATCGCAGTCCACAAGCTCTTAGACATCAATTTGCCTGTTTTAATTTTGTTGATGCCTTCCACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCCTGTGTCAAAAAATCAAAAC

Coding sequence (CDS)

ATGAATATTGGAAGAACAAAGAGTTCTTTATTGTTACTCAATTTTCATCAATTTTTGCGGCAGTATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAGAACATTGAAGCTGTAGTTGAATCAAAGTCGTATGAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTATTTCTCTCCACTTTTCCTGCTAACTTAAGAACACAAGTTGTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTCAAGATCCCAGTTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCGTTTCCCCTCTCTCTTCCAGTCCTTCAGAGGATTCTTCACTCTGGTTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGCCAGTCTAAGTCTGTTGCTAATATCTTGATGGATATGCGGTCAATTGGCTACAAGCCTGACAGCAACATATGTAACTTTCTTATATCCTCTCTTTGTGCCATTGATGAATTAGCAGAGGCTTTTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGGACCTTGATTAGTGCAGCAACAGCTCTTAGGCGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAACATTGTGGCTGCTTTACGAGCAAACCGAGAGGTAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTATCGCGAGTATATGTTAGCGGGAAAGGTGGCCATGAGGATGACAGAGAGAGGGTTTATACCATATATCAAGGTAAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGAGAACCGGAACTTGCTTCTGCTGTAAGGCGCAGATTTGTAGAGTTGAGATTCAATTCCCCTGTATGGATATTCTATTTCTGTAGTGAGTCCCGTTTTCTTGATGAACTCAAATGCTTTGTACATGTAACCACCATTGCATCCCTGGTTCCCCGATGCCACATCGCAGTCCACAAGCTCTTAGACATCAATTTGCCTGTTTTAATTTTGTTGATGCCTTCCACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCCTGTGTCAAAAAATCAAAAC

Protein sequence

MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELRFNSPVWIFYFCSESRFLDELKCFVHVTTIASLVPRCHIAVHKLLDINLPVLILLMPSTAATAENAQQLPVSKNQN
Homology
BLAST of CcUC02G026440 vs. NCBI nr
Match: XP_038902935.1 (pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_038902936.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_038902937.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida])

HSP 1 Score: 592.4 bits (1526), Expect = 3.0e-165
Identity = 307/342 (89.77%), Postives = 324/342 (94.74%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LL FH+FLRQYSSIHSISPSQ LQE+I+A VESKSY+KLPDLFPSL+EA
Sbjct: 31  MNIGRTKTSAFLLGFHKFLRQYSSIHSISPSQALQESIKAAVESKSYKKLPDLFPSLREA 90

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP N+RTQ+VDEILQSLISIRPRSRSQFVHVSLLFYTLQ  SPFPLSL
Sbjct: 91  CHNPNLFLFLSTFPVNVRTQIVDEILQSLISIRPRSRSQFVHVSLLFYTLQISSPFPLSL 150

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSG VPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICN++ISS
Sbjct: 151 PVLQRILHSGYVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYIISS 210

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LCA DELAEAFQVLKGMGGAGC PDLESYGTLISA TA+R+TDKAVELLKEMV+KVKLTP
Sbjct: 211 LCATDELAEAFQVLKGMGGAGCFPDLESYGTLISAVTAVRQTDKAVELLKEMVLKVKLTP 270

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQGTIIN+VAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLE REY+LAGKV 
Sbjct: 271 RQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECREYILAGKVT 330

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELR 343
           M MTERGFIPYIKVRQKVVEGLAGIGE E ASAVRR+FV L+
Sbjct: 331 MGMTERGFIPYIKVRQKVVEGLAGIGEAEFASAVRRKFVGLK 372

BLAST of CcUC02G026440 vs. NCBI nr
Match: XP_004139374.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN60845.1 hypothetical protein Csa_019208 [Cucumis sativus])

HSP 1 Score: 589.7 bits (1519), Expect = 1.9e-164
Identity = 304/341 (89.15%), Postives = 324/341 (95.01%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL QYSSIHSISPSQTLQ++I+A VESKSY+KLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLISIRPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQGTI N+VAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQ+VVEGLAGIGE ELASAVRRRFVEL
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. NCBI nr
Match: KAA0063642.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18384.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 581.3 bits (1497), Expect = 6.9e-162
Identity = 302/341 (88.56%), Postives = 321/341 (94.13%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL Q SSIHSISPSQTLQ++I+A VESKSY+KLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQ TIIN+VAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. NCBI nr
Match: XP_008455557.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] >XP_008455565.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 2.6e-161
Identity = 301/341 (88.27%), Postives = 320/341 (93.84%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL Q SSIHSISPSQTLQ++I+A VESKSY+KLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRS +KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQ TIIN+VAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. NCBI nr
Match: XP_022971046.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971047.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971048.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima])

HSP 1 Score: 553.9 bits (1426), Expect = 1.2e-153
Identity = 284/342 (83.04%), Postives = 314/342 (91.81%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           M +G  ++S  LL+FHQFLR  SS+ SI+P+QTLQE+I+A VESKSY+KLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP N RTQVVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+IL+DMRSIGY+PDS+ICN+LISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           R+GT+IN+VAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REY+LAGKV 
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELR 343
           M MTE+G+IPYI+VR KVVEGLAGIGE ELASAVRRRF ELR
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELR 342

BLAST of CcUC02G026440 vs. ExPASy Swiss-Prot
Match: Q9LNC0 (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX=3702 GN=At1g06270 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-92
Identity = 174/316 (55.06%), Postives = 234/316 (74.05%), Query Frame = 0

Query: 27  SISPSQTLQENIEAVVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEIL 86
           SIS  + +++ I+  VE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P PQTHLLLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQSKSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDL 206
           ++R  S+SVA+I+ +M+ IGY PD+  CN+L+SSLCA+D+L EA +V++ M  AGC+PD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINIVAALRANREVRRAVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  ++PR+G +  + AALRANRE+ +A+E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLEKESHNVGFESYELLVEGCLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REY+LAGKV MRMT+RGFIPYIKVRQKVVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EPELASAVRRRFVELR 343
           E +LA  VR+R  ELR
Sbjct: 327 EWKLACTVRQRVSELR 342

BLAST of CcUC02G026440 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-09
Identity = 81/383 (21.15%), Postives = 164/383 (42.82%), Query Frame = 0

Query: 14  NFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEACHNPNLFLFLSTF 73
           +F  F     +++ +  ++T    +EA+      E++  +F  +Q+     +   +L+ F
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160

Query: 74  PANLRTQVVDEILQSLISIRPRSRSQFV----HVSLLFYTLQSPSPFPLSLPVLQRILHS 133
            +     V   + Q+  ++R      FV      + L + L        ++ V +R++  
Sbjct: 161 KS---LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 220

Query: 134 GCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAE 193
           G  P+ QT+  L    L +R    SV  +L +M ++G KP+       I  L    ++ E
Sbjct: 221 GFRPSLQTYSSL-MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 280

Query: 194 AFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINIV 253
           A+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    +  P + T I ++
Sbjct: 281 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RHKPDRVTYITLL 340

Query: 254 AALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVAMRMTERGFI 313
                NR++    +    +EK+ H     ++ +LV+   +   +  A      M ++G +
Sbjct: 341 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 400

Query: 314 PYIKVRQKVVEGLAGIGEPELASAVRRRFVEL-----RFNSPVWIFYFCSESRFLDELKC 373
           P +     ++ GL  +   + A  +      L      +   V+I Y+      +  L+ 
Sbjct: 401 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 460

Query: 374 FVHVTT--IASLVPRCHIAVHKL 386
           F  + T  IA  +  C+ +++ L
Sbjct: 461 FEKMKTKGIAPNIVACNASLYSL 478

BLAST of CcUC02G026440 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 0

Query: 153 KSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTL 212
           +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTL
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581

Query: 213 ISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINIVAALRANREVRRAVEII-ELLEK 272
           IS      R + A +LL+ + +K + LTP       ++  L   R+   A+ +  E+LE+
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQ 641

Query: 273 ESHNVGFESYELLVEG-CLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EP 332
                   SY ++  G C        A    + + E+GF+P       + EGL  +  E 
Sbjct: 642 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 701

Query: 333 ELASAVRRRFVELRFN 345
            L   V     + RF+
Sbjct: 702 TLVKLVNMVMQKARFS 715

BLAST of CcUC02G026440 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 51/205 (24.88%), Postives = 95/205 (46.34%), Query Frame = 0

Query: 119 SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLI 178
           ++ +L+++   GC P   ++  L   + K++   +++   L  M S G  PD    N ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYPDIVTYNTML 422

Query: 179 SSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKL 238
           ++LC   ++ +A ++L  +   GC P L +Y T+I       +T KA++LL EM  K  L
Sbjct: 423 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DL 482

Query: 239 TPRQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGK 298
            P   T  ++V  L    +V  A++     E+        ++  ++ G  + R+   A  
Sbjct: 483 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 542

Query: 299 VAMRMTERGFIPYIKVRQKVVEGLA 324
             + M  RG  P       ++EGLA
Sbjct: 543 FLVFMINRGCKPNETSYTILIEGLA 565

BLAST of CcUC02G026440 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-08
Identity = 78/344 (22.67%), Postives = 144/344 (41.86%), Query Frame = 0

Query: 52  DLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQ 111
           DLF  + ++   P++  F     A  +    D +    IS+  R ++  +   L  Y + 
Sbjct: 66  DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLV----ISLGERMQNLRISYDLYSYNIL 125

Query: 112 -----SPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIG 171
                  S  PL+L VL +++  G  P   T   L + +   +  S++VA ++  M  + 
Sbjct: 126 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA-LVDQMFVME 185

Query: 172 YKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV 231
           Y+P++   N LI  L   ++ +EA  ++  M   GC PDL +YGT+++        D A+
Sbjct: 186 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 245

Query: 232 ELLKEMVVKVKLTPRQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEG 291
            LLK+M  K K+         I+ AL   + V  A+ +   ++ +       +Y  L+  
Sbjct: 246 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 305

Query: 292 CLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELRFNSP 351
              Y  +  A ++   M ER   P +     +++     G+   A  +    ++   +  
Sbjct: 306 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 365

Query: 352 VWIFY-----FCSESRFLDELK----------CFVHVTTIASLV 376
           ++ +      FC   R LDE K          CF +V T  +L+
Sbjct: 366 IFTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLI 402

BLAST of CcUC02G026440 vs. ExPASy TrEMBL
Match: A0A0A0LFL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 9.4e-165
Identity = 304/341 (89.15%), Postives = 324/341 (95.01%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL QYSSIHSISPSQTLQ++I+A VESKSY+KLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLISIRPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQGTI N+VAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQ+VVEGLAGIGE ELASAVRRRFVEL
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. ExPASy TrEMBL
Match: A0A5D3D4C7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001070 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 3.3e-162
Identity = 302/341 (88.56%), Postives = 321/341 (94.13%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL Q SSIHSISPSQTLQ++I+A VESKSY+KLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQ TIIN+VAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. ExPASy TrEMBL
Match: A0A1S3C1B6 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN=LOC103495705 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.3e-161
Identity = 301/341 (88.27%), Postives = 320/341 (93.84%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           MNIGRTK+S  LLNFH FL Q SSIHSISPSQTLQ++I+A VESKSY+KLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP+PQTH LLSSAWLKQRS +KSVANILMDM+SIGYKPDSNICN+LISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQ TIIN+VAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REY+LAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEL 342
           M MT+RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVEL 341

BLAST of CcUC02G026440 vs. ExPASy TrEMBL
Match: A0A6J1I5P5 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=3661 GN=LOC111469834 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 5.7e-154
Identity = 284/342 (83.04%), Postives = 314/342 (91.81%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           M +G  ++S  LL+FHQFLR  SS+ SI+P+QTLQE+I+A VESKSY+KLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP N RTQVVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+IL+DMRSIGY+PDS+ICN+LISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           R+GT+IN+VAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REY+LAGKV 
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELR 343
           M MTE+G+IPYI+VR KVVEGLAGIGE ELASAVRRRF ELR
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELR 342

BLAST of CcUC02G026440 vs. ExPASy TrEMBL
Match: A0A6J1G5M7 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3662 GN=LOC111451115 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.3e-153
Identity = 283/342 (82.75%), Postives = 313/342 (91.52%), Query Frame = 0

Query: 1   MNIGRTKSSLLLLNFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEA 60
           M +G  ++S  LL+FHQFLRQ SS+ SI+P+Q+LQE+I A VESKSY+KLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP N RT VVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISS 180
           PVLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+IL++MRSIGY+PDS+ICN+LISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVA 300
           RQGT+IN+VAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REY+LAGKV 
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELR 343
           M MTE+G+IPYI+VR KVVEGLAGIGE ELASAVRRRF ELR
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELR 342

BLAST of CcUC02G026440 vs. TAIR 10
Match: AT1G06270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 8.5e-94
Identity = 174/316 (55.06%), Postives = 234/316 (74.05%), Query Frame = 0

Query: 27  SISPSQTLQENIEAVVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEIL 86
           SIS  + +++ I+  VE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P PQTHLLLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQSKSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDL 206
           ++R  S+SVA+I+ +M+ IGY PD+  CN+L+SSLCA+D+L EA +V++ M  AGC+PD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINIVAALRANREVRRAVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  ++PR+G +  + AALRANRE+ +A+E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLEKESHNVGFESYELLVEGCLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REY+LAGKV MRMT+RGFIPYIKVRQKVVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EPELASAVRRRFVELR 343
           E +LA  VR+R  ELR
Sbjct: 327 EWKLACTVRQRVSELR 342

BLAST of CcUC02G026440 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-10
Identity = 81/383 (21.15%), Postives = 164/383 (42.82%), Query Frame = 0

Query: 14  NFHQFLRQYSSIHSISPSQTLQENIEAVVESKSYEKLPDLFPSLQEACHNPNLFLFLSTF 73
           +F  F     +++ +  ++T    +EA+      E++  +F  +Q+     +   +L+ F
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160

Query: 74  PANLRTQVVDEILQSLISIRPRSRSQFV----HVSLLFYTLQSPSPFPLSLPVLQRILHS 133
            +     V   + Q+  ++R      FV      + L + L        ++ V +R++  
Sbjct: 161 KS---LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 220

Query: 134 GCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAE 193
           G  P+ QT+  L    L +R    SV  +L +M ++G KP+       I  L    ++ E
Sbjct: 221 GFRPSLQTYSSL-MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 280

Query: 194 AFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINIV 253
           A+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    +  P + T I ++
Sbjct: 281 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RHKPDRVTYITLL 340

Query: 254 AALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGKVAMRMTERGFI 313
                NR++    +    +EK+ H     ++ +LV+   +   +  A      M ++G +
Sbjct: 341 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 400

Query: 314 PYIKVRQKVVEGLAGIGEPELASAVRRRFVEL-----RFNSPVWIFYFCSESRFLDELKC 373
           P +     ++ GL  +   + A  +      L      +   V+I Y+      +  L+ 
Sbjct: 401 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 460

Query: 374 FVHVTT--IASLVPRCHIAVHKL 386
           F  + T  IA  +  C+ +++ L
Sbjct: 461 FEKMKTKGIAPNIVACNASLYSL 478

BLAST of CcUC02G026440 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 7.7e-10
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 0

Query: 153 KSVANILMDMRSIGYKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTL 212
           +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTL
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581

Query: 213 ISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINIVAALRANREVRRAVEII-ELLEK 272
           IS      R + A +LL+ + +K + LTP       ++  L   R+   A+ +  E+LE+
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQ 641

Query: 273 ESHNVGFESYELLVEG-CLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EP 332
                   SY ++  G C        A    + + E+GF+P       + EGL  +  E 
Sbjct: 642 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 701

Query: 333 ELASAVRRRFVELRFN 345
            L   V     + RF+
Sbjct: 702 TLVKLVNMVMQKARFS 715

BLAST of CcUC02G026440 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 51/205 (24.88%), Postives = 95/205 (46.34%), Query Frame = 0

Query: 119 SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNFLI 178
           ++ +L+++   GC P   ++  L   + K++   +++   L  M S G  PD    N ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYPDIVTYNTML 422

Query: 179 SSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKL 238
           ++LC   ++ +A ++L  +   GC P L +Y T+I       +T KA++LL EM  K  L
Sbjct: 423 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DL 482

Query: 239 TPRQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYMLAGK 298
            P   T  ++V  L    +V  A++     E+        ++  ++ G  + R+   A  
Sbjct: 483 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 542

Query: 299 VAMRMTERGFIPYIKVRQKVVEGLA 324
             + M  RG  P       ++EGLA
Sbjct: 543 FLVFMINRGCKPNETSYTILIEGLA 565

BLAST of CcUC02G026440 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-09
Identity = 78/344 (22.67%), Postives = 144/344 (41.86%), Query Frame = 0

Query: 52  DLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQ 111
           DLF  + ++   P++  F     A  +    D +    IS+  R ++  +   L  Y + 
Sbjct: 66  DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLV----ISLGERMQNLRISYDLYSYNIL 125

Query: 112 -----SPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIG 171
                  S  PL+L VL +++  G  P   T   L + +   +  S++VA ++  M  + 
Sbjct: 126 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA-LVDQMFVME 185

Query: 172 YKPDSNICNFLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV 231
           Y+P++   N LI  L   ++ +EA  ++  M   GC PDL +YGT+++        D A+
Sbjct: 186 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 245

Query: 232 ELLKEMVVKVKLTPRQGTIINIVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEG 291
            LLK+M  K K+         I+ AL   + V  A+ +   ++ +       +Y  L+  
Sbjct: 246 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 305

Query: 292 CLEYREYMLAGKVAMRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELRFNSP 351
              Y  +  A ++   M ER   P +     +++     G+   A  +    ++   +  
Sbjct: 306 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 365

Query: 352 VWIFY-----FCSESRFLDELK----------CFVHVTTIASLV 376
           ++ +      FC   R LDE K          CF +V T  +L+
Sbjct: 366 IFTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLI 402

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902935.13.0e-16589.77pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_03... [more]
XP_004139374.11.9e-16489.15pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN6084... [more]
KAA0063642.16.9e-16288.56pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18384... [more]
XP_008455557.12.6e-16188.27PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] ... [more]
XP_022971046.11.2e-15383.04pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022... [more]
Match NameE-valueIdentityDescription
Q9LNC01.2e-9255.06Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX... [more]
Q9SZ521.7e-0921.15Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
Q9LFF11.1e-0826.53Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q3EDF81.4e-0824.88Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9LQ141.8e-0822.67Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LFL39.4e-16589.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1[more]
A0A5D3D4C73.3e-16288.56Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C1B61.3e-16188.27pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1I5P55.7e-15483.04pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=366... [more]
A0A6J1G5M71.3e-15382.75pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
AT1G06270.18.5e-9455.06Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G31850.11.2e-1021.15proton gradient regulation 3 [more]
AT3G53700.17.7e-1026.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09900.11.0e-0924.88Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G62930.11.3e-0922.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..271
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 1..342
NoneNo IPR availablePANTHERPTHR47933:SF18PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..342
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 173..205
e-value: 1.5E-4
score: 19.7
coord: 208..234
e-value: 0.0012
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 158..215
e-value: 0.0011
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 9.514466
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 118..276
e-value: 6.5E-22
score: 80.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G026440.1CcUC02G026440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding