CcUC02G025970 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G025970
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Photosystem II CP43 reaction center protein
Location	CicolChr02: 11181783 .. 11198171 (+)
RNA-Seq Expression	CcUC02G025970
Synteny	CcUC02G025970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTAAGAGTTCCAGAAACAGCATTCAGAAACATACTAACTTCAGAAATAACAGACTTACACAACAAGTCTAGGAGTTTCAGAAGCAGCATTCACATTCATATTAACACCTTAGGATTTTAAGAAACAACACTTTTTCATTGATATAATGAAAAAAGGCTAATGCTCAAAATACAATGTCACATGAAACAAGTACAAGATAATAAAATGCCAAGATTGAGAAAATAAAAGAACTCCAATTCAGACAAAAATCTTGAATAGAAAAATTAACAAATGATTTAGAAAGAGAACAGAATCTGGCATTAGTCCTTGCAACTTCAAACCGATCGAACCACTAAAGAGATTTTTTTATCATGGAAGACTCTGATTCCTTTCAAACCAAATTTCAGCAAGAAGAGCTTTAACTGCATTAGACCATAATAATTGAGATTGGGGCTTCAAAGAAGGACCAACGAGGATTTGTACTATATTGTCCTTGAATGAATCACCAAAGGACAAAAGGCCCACTGAAGATGAAAGATAGCTAATAATTTCAACCAATAAGCCATATAGCATATTTGCATACAGAGAATAGATGTTGAAGATCTTCATTTTCTTCCATGTAACGGGGTAGATTGTAGGAGACAAATAATGAGCAGGAAGCTTCCTTCGGAGAATGGAAGCCAAGAACCATAGCCCAAATAAGGATGTTAACTCTCTTAAGGCTGTTTTCCACAATTTCTGAAAAACTGCTTTATCAATTACAATGGAGGCTGCCAAATGCTTAGATAAAGATTTGACCGAGTAAATTCCTAAAGAATCCAAGCTCCACATATGACAATCGGAGAAGGGCTCTATCTTTTTTCCCAATAAAACTTGTAGCAGCCGTTCAAACTCCATAATTTCAACATCTTTCAGAAGCTTTTTAAAATAAATAGCCCAAGATAAAGTATCTCCATCCCAATGGTCAAACGCCGAACCATTGGGAGATAATGCAATCTTGAAAAGTCAAGAAATCTGAGAACTAAGGGAGAACTTTCAACCCAAGGTGGTTCCAAAATGAATTTCTTCTACCATTGCCCAATTTAAAAGTTGCCAAGGAATCAACTTGCATCCAAACTTTGGAAATACTAATCCAAGGACTTCTCAAGCTCAAACCAAAATTTCCAGCAGTGTGCCATGAGAAGACCTTTACCATGAATGCTCTGAACCACTTTGCACCATAGTCAGTCGGGTTCTTGAATAAATCTCCAACCTCATCTAGCTAACAAAGCCATATTTCTGAATTTCAAGCCCCAATACCGAGACCACCATCCTTTTGTGACTTGGATGCCGAATCCTACACTTCACAAGGTGATTAAGCTTGTTGCCTTTATTACCTTACCAAAAGAGGACTTCAAAATTCTCTCGATGATTGTACTTTTGCCAGCATAAGAAAGAGAGACATAATAAATTGGAAGGTTCTCCTAACCAGCTCTGCATAAGGTAAGCCTTTCTCCACGTAAGATATTGAATCGTTTCCCTCGATCTAAATTTTTCTATTATGGGCTGCCAAAACGAGACATTTTTGGGATTCCACCCAATGGAAGTCCAAGGTATAAGGGTTTAGAAAAGGCAACGATTCTACCTTACAATAAAGCTATGAAGAAGTAGAAATCAACTTTTCCTCATCCACATTAATTCCACACAAAGCAGATTTTTCCTTTCTAACTAGAGCACCACTCAAATAACTCTATTGCCTCGATGATCACATCCAACATTCCGTCATCATATTTGCAAAAAACAAGATTGTTATCAACAAATTTTAAAATAAACACATGAACCTTGTCTTTACCGACAACAAAGCCCTCAAAGACTCCTCTCTCATAAATGAAATCAATAATAGCGCCTAGGACTTCACTAACGAAGAGAAAAAGGAAGGGGGAAATGGGCCCCCTTTTCTAATACAACCCCTTGGCCTTCCACTAATAAATACTGAAAATTTGGGGTCACAAACACAACCATTATTCAAGAAATCCATTTTGGACTAAAACCTTTCAGTGAAAGAACATCCTCAAGGAAATCCCAATCCACATGATCACAGATCTCCTCCAACTGAAGCTTAAGGATCCGCCCCTTTTTCTTCTTTGCCCTCTACTCCTCAATGATTTCATGAGCAACAAGGGGAAAATCTGTTATTTGTCTTCCGCCTAAAAAAGCACACTGAGAAAAACAGACAATACTAGGCATTACTAACTTTAATCTTTTAGCAAGGACCTTTGTGATCGATTTCATTAGCAACAATGGCAAAATCTGTTATTGTCTTCTGCTTAAAAAAGCACCCTGAGAAGAAAATACTAGGCATTACTAACTTTAATCTTTTAGCAAGGATCTTTGTGATGATCTTATAAATTGAAGTTATTAGTCTGATTGGGCGATAATCTTTAACAAAGGTAGCTGCTTTTTTTTTCTGAATCAAGCAAATAAAGTTCTCTTTGATACAAGCATTTAACCTTCCATTTTTGAAGAACTCTGCAAAAAGATCTAGAAAATCTGCTCTCATCAATTTCCAAAACTTGAAGAAGAATTCTACAATAAAACCATCTGCACCCAGAGCCTTATTCTTCCCAAGAGCTTTCAAGGCTTTCAATATTTCTTCCGCTGTAAATGGAGCTATTAGATCTGAGTCTGAGCTGCAGAAACTTGAGATAAACAAATGTTACTTGGAATGAAATCAGGTGATTGTTTATATAAAGAAGACATGGAACTTAAAATGTCATTTTCAATATCTCTGAAAGAAGTAAGAGAAATCCCCTGACTGGAAAATAGTTCAGAAATCAAATTTTTTTCTCTTTGCAACCAAGAATCTATGGAAGGAGCTAGAATTTTCATCTCCCAACCAAAGTCAATTGCGCTTGCATGTTTGAATTGAATTGCATGCTATAAAAAGATAAATTTCCAGCAATTCTCTGTTAGACCCCCAATTATACACACCTATCATAGGAAGGGTAAAAGAGGAAATAACCAAGAGAGTGGTGAGACAAATTCAGTTGGGATTGTGGCTGCAAAATCAGTTGAAGAAGGGGGGACCAGCGGAACCATCAGCTGAGGGGTTTATGAAGGGTTTTTGGGAGAGCAAGTGGGATATGGAGAATTAACAAGCTGGAACAAGCTAGGAGAGGGAGGCACTCTCGAATCTGCCCAAATTCGTTTTCTCTTCATCTTTGCATTATTTTCTTTCTTTCTTTGCTGCTGCTGTTGTTTAGAGTCATCCTGATGAACTTGGGACACTCCTTGAGTGATTGATATTGTGGATAAACAAATAGTATTTGTTGGCTGGAATCTCTGTTTTGTGCTTGTTGTTAGGTAATGTGGAGTGTGAAGGAGGAGGTATCTAACATTCTCCTTTGATTGCAGTGTGTATATCCACTTCCAAGGAAGACAAATTGTTAGCTTCCGCTTTTGAATCAAAATAAGCTAATTCATTAAGAAGACTTTTCTCCTTGCGTTTTCTTTTTCATCTGCTGCTACATTCCAATCTTTAACTGCCACTTTAACTTTTCTAAGCTTTAAGCAAATTACAAACCCAGCCCAACCTTTAATATAATTTCCAGCAAATGAAGCTCCAATTTCCTTCCAACAAACTTTATCTAACAGCCAACAATTGCAAAAGCGGAAAGGAGAAGGACCCCACTGAACTGCACCAGCTTCTAATAATAACGGAAAATGGTTCAATCTAAATTCTAGAAAGAACAGAATTTACAGATGGTCCTGGAGGGCATAAAGAGCTAGATAATATATATATTGTTGAATTCATTCACCTCACTTCAAGGGCAGGAAATTTCTTATATCGGCTACTTTTCAGGAAACAGCTTACTGAAAAAATCAAGGTCACTCAGAATTTATGACAAGATGGTAATACCCTAATACACATACTTTTTTCCTTTAGGGACAACTCCTTTGACCCTACAACATTTGGGCGTCAAAGAAACCCGTAAGATATTAAATCCTAGGTAGGTGGTCACCATGGATTGAACCCAGGACCCTTTAGCCCTTTGGCCTTTTTTTTTATGTTTCCACTACCACTAGGCCAACCCATGATGGTTTACCCTAATACATATACTAGTACAAGAAATATGCAATTCAGATAAAAACTACTTAAAGAGAAAGGAAAAAGAAAAGGAAGAAGAACAACATAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAGAGAGAGAAATTAAAGGGAGTTTGTTCCTGGGACACTAACTTGCAAGAGAGAACCGGAAATGATTTGAGAAGAGTGGAAACTCCATGTATAAGCATTGTCCTAGCTTCAAGGACTTCCTGTGCCACTGGAATCATACCCTTTATAGGATAGTTTTTTGCCCGATCTTGAATTCTCTTCAAAATCATTGGACGGAGTTTCTTCAAGTCAACTTTGGAGCTGTAGCATTTCTGTAGCATGGCTTCCTGCACAACACTCTCGCTGAACTTCCTTCTAAGAGCCATAAAAGCCATAGTTTTCATGGTGCAAACCCTAACCTTTCCTTTGAATTCAATGGAAAGTGTCCTTGGGTGTCAAATTTGCCCGACCGAGAGGCAGATCAGTGTAACAGTCCTTTTTCTTTTTGATAAGAAACTGCCTGTATTTTGCAATATAGCTAATAAAATAATAATGCAGAAGCAAGAGTTAGAAACTTTTACAATTTACACACTTCAGCGGAAGCTATTACAAACTATTCTAGGATAAGCTATCAAAACCTAAAAGAAACATCTTTCGATGTCTTGTGCTCGAACGCCAATCTTCACTGCTTTTATAACTTTAACTTGATCCCTCATCTGGAAACATTTTGGAAAAGCAAAAATGAGTACAAAAATACATAATAAGCAATTCCCATATCAAGTTTTGAAATTCACTTTCTTTTAAAATGTTCGTAAACAAAAACACAAATCCTTGTAAAACTTCGTTACAAACGGTGATTTAAAGCCAAAATCTTTCAATCAAATAAGCTTTTGAAAATATAATTTTCAAACGAAAACTTTTGAATAACTTGCAATATCTTTAATAAAACAAAACCTTCAATACTTTTAGCAAACAAAAACTTTAAAACGGTCAAAACTTTTATTTAGTAGAGCTTTCAATCAATCAATACTTCATTTAGCATAGTGGAAACGATGCCTAGTTGGAGTAACCTAAACATATGTGGTTATCCATCAGTAACACCAGTTATTTCATTCATTCATTCATTTAGATATGTCGAATTAAACGGAACAAAATATACATTACAATTACATATGTGTGAGGCCATACAAGTGTAACGCACACTCATCTTCATTCCAAAGGAAAGCCAAACCACTATAAAGTACCTTCTCACAAATAAGCATCAATCATTTTATTTACCCTCAACCCCACATTTGGTTACAACCACGTAAGCATACAATCTCCAAAACAAAAACTTGGCATATCCGGATACCCTATCTATCCAAACAACAAAATTCTTTCACAAGCAATTGAAACAAAACATATCACATACTGTCAATTTGAAACGTTTCAAACAGTCACATACTTTCATTTTGGCATAAACAATTAAAAACAAACAAAACTAGTTCAATTAATCCTCCTAAAACATATTCAGAAACATACTTCCAACATCTAATCAAACAGCAATTGTCAAAACATAATTAACCCAAAATTTATGTTTTTGAAGGGATGTGGAGACAAATTACCTTGATCAATAATCCTACAATTCTCAATCCAAAATCTACTTTCTTAAACAAAATGCCAAGTTCCTTGAAGTCGAAACAAATAAGACAAAGTTTGGAGATTAGAACCCGATCCAAGAACCTTAATCGAAATTGAGAGTGTTCAAGAGGCATATTCTTATCCAAAATCAACCAAAACTAACTAACCATAGATCTTAATCTATCAATCCTCGTTAGTCTAAATCTACAAACAGAAAACTTTTACAGATTTTTTTTATATCCATAATGTACGGCCAGTTACACACACCTGGACTAATCTCACAAACAACCCACTGAAAAACTTTCACAGGTTATAAACTGATCTAACACACCTTAATAGAGTCCGAAAGGGTTCAAGGCATGCTAATACTCATAGAACCTTAATTGAATACTTCCAAACTAAAACGGACACAACAGATGAGTTCCAATGGTTCAGAACCAACATTCGAACACTTAAATCCTATTTGAAAGGAAATTAAAGAAACAATCCTTACCAAATCTTACCAAAAAGGCTCCGAACCATGCTTATTGGTGTTCGAAAACGTCCAACCTTGCAGATTTGAACCTCAAACGTTATGGGTAAACTAATTTAAGGCCAATCGGGGTGTGGGTAACAGTCGAAAGCTTATCCCCAAGTCAAAAACGCCGCTGCAAGAGAAACCCAGTTGCCGAAAACGTGCTGCACCACTTGTTGTTCGCGCTGAGTTATTGTACGAAGAAGAAATGATGCTGCGAAGGTCTAGGTGAAACAGTTCGAAGTCGTGCACTAATGCAAGTCAGATTCGTGGATGAGGTCGCGCAAAGATGTTGGTCGTCGGAGTCTGTACGTCGTTGCCGATGCTCGTCCGAGGATCACCGTCGTGGTCGGTGATCGCCGGAGAACGAGAAAGGTGCGGGTGCGGCGGCTGCGAATAGGGAGAGGAAAAGGATGAACGGTTTCTTTTCATTTCATTTTTATTTTCTTTCTCGCTGTTAAGAAATTGCTATTTTTGAACTAAAAAAAAACTCTTTTTCCTTTCAAAACTAAACCCTTTTTCAAATTTTTTTGTTTTTTTTTTTAAACTCTTTTTCACTAGGTTTTTTATGCTATTGTTGTTATAAGGAGGCTTGAAGTTTATTGATAAATAGATAGCAGGCCTATAACTATCTCCACCCGTTAAAAAGAAACTAAGTTCAAGATCATTTTGTATCAAATAAGTTGGAACCCTTGATCCAAAATTATATAAACATTTGAGGATGAAATCATGCTGGTTTTGGTCAATCCCTATTAGCTTATACAATTGTAACAAGAAGATTTCAAACTTAATGTCACACCTTACATTCAAACCCCCTAGATTGCTGCATGCATAGTCTCGTTCATCCTCATTCCAAATGTCACCATAGCAAACAAACATGTGAGACATTCAGTATGTGACATCCCAAAATTTCAATAATTTTAAATTAATTATCTTGAATTATTTAGGTAATTATTTGAATTTTTAAGGTTTAGGATAATTCAATTTAGATTGAATCTGATCAAAAGATTTGAGTTTAATCCAATTCGTGGAAATTGAATTTAATTAAGAGTTATATGGAAGTTAATTTAATTTGAAAATTTGGGTTTGGGTGAGATTTAAGAATTTGGTTAATTTAAGTAAAAATGGATAAGTTATTATGGAATTGAAATTTAGGTGAGTGGAATTGGTTTTAGGAGATTATTTAATTAAATTATTTTGGGTGGTTGGGAAGGATTTGATTTTGATGTGATGAAAAAAAAAATTAAATAGTTTCATATTTTGTTTTGGGGGAAGGAAAAGGAAAAGAAATAGTTTCATATTCTTTTTCTTCTCATCTTCGTGACCAACGCCGATAGTCGAGACCCACTCCTCTAGTTGTCGTTGTTTACTGCCACCGATAAGAGTTATTTTTGCCGAATTTTTTTTGTCGAATTTCTGGAATCTTGAGGTTTTTGGTAAGTTTTGTGGATCTTTTTAAAATCTTTTTTACCCATCAACTTCTGGCCGCATTTGGTAGTTACCGATTGTGATTTAGTTTTAGATTGGCAATTTGGAGTCTTTGGAGCCATTGTCCACCAGTTTCAAGGTATTTCAATAAGTTTTCAAGAGGGGATCTCAACTGAAGTTTGAATTAGTTTTGAAGCAAGTCGTACTGTTGGTAAGGTTTTATTTGGATTTTTTGCGTTAATTTTGTGTTCTGGAATTAGTTCTAAGTTAGAATTAAATTTAGTATAGAATTTTAGAGTTTGACTAAAAAATTTTACCCAAAAACAAAAAAGAGTTTAGACGGTTTATTTAATTGGACTCAAATTTGAGGTAAGTAATTCTACTATTGAAATGCCTTAGAGCCAAGAGGAATTTAGGTATTTGCTGAGATACATGTTGTTAAGCGTTTTTTTTTTTTAATGAAAGTATAAATGTCATGTGTTTCATTATAAATTGTGAATGTATTGTTACATACTTGAACTGGTGCATGAAAGTGATTACTAGGATTGATTCGTTGTTATGATATTATGCATGTTTGTTAAGACTGTTTAGCATGACATTATTTACGAGATTTTATGTGGGATTCACACATATGTAAATGTTGCATGAAATTGCGAGTTTGGGTTCAATCTCTTTACCTTCCCACAATATTTGACTGCACGAAGTGGTGCATGTCCAAGGGTTCTAGTGCATGAAAGTGATGTGTTAGGGTTGGTATGTGTGAAAGTGACACATATCTAGACGAAATTGGGGTGCACGAAAGTGGTGTACGCCCAATGGGTTATATGTCCAAGGGTTCTAGTGCATGAAAGTGATGTGCCAGAGTTGGTATGTGTGAAAGTGACACATATCTAGAGGGAAATGGGGTGCACGAAAGTGGTGCATGTCCAATGGATTATGTGTATACGTAACTATGTGTACGTAAATGGTGCACATCGTAACATTCTTAGAGATGACCTGGGTGTATAAAAGTGATGCATACCCAGAGGGTTTTATGTATATGAAAGATATACCTCGTACCTTATGTGCAAGAGATTAGAGCATGTCTAGAGGAAAGGAGACAAAGTGAGCCAGGAACAAAAAAAATCTTTAAGTTCCATTAACATGGAGCTGCAATTCATGTTTGTAAGCAAATGAACAGCCCGACCCTAACAATGGGGTTACTTACTGAGTATTTTTCTTATATTCACCCTTTCTTATTTTACATTTTTCAGATAAAGGCAATAACAGACAAGCGTATCACAAAGAAGAATGTGTGACCATGCCATTGGGATTGGTTAGATGCTTTCACACATGTATTCATGTTTTAGATTTCCAATATTGATGTTTAAAATCAATGTCCGTCTTTACACTACTAGATGTTTATACAAATTTATAGTTTTGTTTTAAGTTTTAGGGTGTCCCGATCAAAGATTTTCAGTTATTCAGATTTAATAAAAATTATTTAATTTATAAGATTCTTTCAGTTTCAGTCTAAATTATGAAAATGGGTCGTTTTGAAATGTTTGCATGCATATGGTAACGACCTAGTATAAATTATGAAAAGGGGTCGTTTTGAGATGCTTGCATGCATGTGGTAACGCCCTAGTATAAATCCTAGGAAGTCGAGTCATTACGCTGCAAATGATGATAAAACTCTTATAGTAGAACTGATTAGCCAAAAAAGTAAAATAATCTTCAACACTGTGATTTTTCCCGTAATGTTGAACAAGTATACTTTACAAGAAAGTTGACTTGGTCAACCTTACGGGAAATCCTAGACATATTGTTTTGATGCTAGTGAACAATTGTAAGTATTTTGTGATTTTTCTCATAAAGTTGCGTAAAGTTGAAAAGTCAACTTCATAAGAAATTATTCCACGCAATTTTATGTTTTGAAAGTGGCTTTGGCAAAAAAAAAAAAAAAGAAAAATCCTTGACTTTGTGATTTTTCTCGTAATGTTGACCAAGTCAACTTTACGAGAAATCTAGCCAAGTGAATTTTCTCTCGTAAAGTTGACTTTACAGAAAAATTCACAGAATACAAAGTTTCTTTTTTTTTCAAGTTCATACATGTTCCGGTAAACGTCATTGGGGATTTTCTCTCCGATGTTTTCCCTAAAACCTTGACAATGGAGTAAGAATTCAAGTTTTTTTTTTTTTTCTCTCTCCAAAAAGCAATTGACAAAGGAAGGAGTAAGGATTTGGTTGGTTATTGCCAACTTTCTGGAAAAAGTAAATTTTGGGTTCCATTTGCAAACCTTATGGGAAATGTAGTTTTTAAATAATGACAAAAGCTAGAAAACAACACAACTTAGTTTTTGGGAACTCTCACAAAGGAAAGAAATTGTTTCTCTAAAGTTGGGACCCTAAGAAAGAAATTGTAAGGAATTGTTCTTCTGAAGTTGGGACTCTCAAGTATAGCTTTTTCAATGAAAAATAAAATGTAAAACTCAAGTTTGAGGTTTCTAACTTAAGATATGTGTCTGAAAGGTTGAGTTAGGCAAGTTAGGTGAGTTCATATTGAATGCAATTGAATGACAAAATGAATTGAGGGGCAAAATAGTATATTCACATGGTGGGTCCCTTCATAAATCTGACGCAATGGAAAAGAGGTTAATAAAAAGTCTATTATTCAAAGGCTTGGGTTACATTTCTCTCCTTCAAAGTCTATTATTCCTCTTCTTTCCTTAGCATACATATCCTAAGTCAGAATTCCGAGTTTCATATAACCCCTTTCTCCCGATGGTATTTTAATTACCGTTGAGAAAACCCTTTTCTCTCAACGGTTTTAAAAAACCATCGAGAGATAACTTTGAAAAAACAATTTCTCCTCTTTTTTACATCCCAACAGTAGCACTTAGTGTCCAGAGAACTACTCTCTACCGACACGGACTAAATTTCGTTGGGATAGGTGTACTTTTCTCGACGAAAAAAAAAGGGGTCGGCATAGCTACTTTTTCCTGATGTTTCATAAACCATTGGAAAAAGTTCCATCGAAAAAACAAAATTTCTTGTAGTGTACGTTCAAGAACCATAGAAAATCAAAGAAATATGGATTAAGAATAAAAATCCTCACAATGGATCCATGGTTCACCTAGACCTAAGCTAGCAACTCACCTAAGCCACAAGATCCATCCAAGATAAACTTTACAATCATAAAATACTCCTATAAAGCAAAAATTAAAGGAGAAAAGAAGAAGAGAATGGGATTAGGGGTTGATAGTCCAAGAGAATTGAGATGTTAAATCGTAAAATTGGCAAAAATACAATTTATATCAAGGGAGAGCGTCGTTGCACTCGGTTAGAGTGTAGTTACACTTTGGGTAGAAGTCGTAGCGGCGACCTCAAGGGTAGTGACATTGTGCGTTGCGCTAGCACACATGCACACCCTTTCTTTTTCGTCAAAGTTCAGAGCCTATTTATAGGAGTTGTATGACAAGCCTTGTCATCCAAACTTGTCCCTTTGAATGACACTTAACAAAAAATGTGGCTTTTTGCATGTTGCCTTACCCATGCACAATGACACCTCATACTTGTGATGTGTTCAACTCAAAATTTGCCATCTCCTTCTTCTTCTTAACCCTTGGACGCATCCTCTAGCTTCCCTTGAGCCTTACCTATGCGTCCAACCTTGCTTAGAATATTCACCTTGCGTTTCATTTGGCATACACCATGCATTCCCTTGTGATTTCTCTCAACCATGCATTTCACCTTAAGTTTTTACTTACAATTCCTCATGTATGCGTCCAACTTGGCTAATTCCCTTGAGGCATACGTCCAAGCTTCCTTACACAACTTCATGGATTCCTCATGAGTCCATCTATGTGTTCATCATATGACAGATGGATTAGGGCTAATGATAAAACTCGAGTCTACATAGCAAGCATATCAGATGTCTTGACTAAGAAGCATGAGAACATAGTGACCACGAAGGAAATCATGGACTCACTGCAGGCGATGTTGGTGGTGTTGATGGAGAAGCAATGTTACTAGATTCATTATCATCCTTCAAGAAAAACAAAAACTTGTACTCCTTTGGTTCATCATTCCAATTCCATATTATTTCCTCATCAAGCTTGTAGCCTTTTGAGCTTGCATCATAGCAAACAAAAATATGTTCCTCACTTTCATCATCAAGCTTACTACGCTTTTAATTAGGTATATGTGTATAGGCAATATTTCTAGATACTCTCAAATGAGCAATGGTTGGTTTTCTTCTTGTCCATGCTTGTTGAGGAGTTTTGTTCCACAAGCTTCTAGAAAGGGAACGATTGACCGAGTACACTCCACATTCAATAGCTTGTGCCCAAAATTCTTCTATCATATTCTTACTCTTCTACATGCTTCGAGCCATATTAAGTATCACTTTATCCTTCCTCTCAACAACACTATTTTGTTGAAGAGTCTATGGAATTGTCATAGACCGACAAATTCCATTTTCACAAAATTTTTTTAATTCATTTGAAGTGGATTCTCCTCCTTATACGCGCAAGCGCACATGGTGAGTAATAATATAATTTTGCCAAGGCCAAGTATCGTTCTCTAGGAAATTGGTTTGGTTAACTTTTAGCTACTCATAGATTCTTCCAACTTTATCTAGAGAACTCAACTGTGACAAAAAGTAATGTAAATTTATCTTAGAAAGAAAATTAAAGATAGACATATATCTACAGTGATGAGAGTGCAACTATTGGGCTATAATGGAATGTAGTTAACAAATGTTAATTAACTAGGTTAAAGCGTTTAGTCAGTTAATTTTAGATCGTTGGAGCTCATGATCTGTAGGTCTATTAGGTCCCCTTGTTAGCTCATGGACTAAACCTCAGAACAGCGTGATGAAAGAATTTGAAAATGTTTTAGGAGTATATGATTTGTTCGTTTTAATTATGAATTTAAACAAAAATGGAGAGTTGAAAATATTTGAATGTGATTTAAATATTAATTGCATAAATAGAGATTCATTAGATTGAAAATTGTTAGGACAAGTGGAAAATTTATGAATTTAATATAATTAATTAAATTATTTAATTAATTATTATTTAAATTAATTATATATTTAATATTAAATTAATATATGTAAAATTATTTAATAGAATTAATTTTAAAGAAGTTGAAAATTAGAAATTCATTTTGAGTTTTGGAGATTTTTCATTTTGCATTAAGTAGGAGGTGGGAGTTTTAGAAACACCTTTAACCCATCTTCTTCCACCTCCTAATCTACTTGGTTAATCAACAATTAAGGTCTCAATTTTATGGCATATTGGATTTTCATGTATTCTTCTTTATATAGAAGAAAGAAAGATCGAAATTGTGTGAAGAACTTAGGTGGAATTTGCTGAAATTCTCTCCAACTCACAAACTCCCCAGAACTCTCAACTCCCTTCAAATTTGCTCCAAATTCATCACAATTTGGATCCCACAATCCGTCCTAAGGTCAAAGAATAACGAGGAAGTCTTTTGTGGTGGTCCACACAGTGTTCATGATAAAAAACATCAAGGAAATCGTTTCAATTTTGAGCTACAACAAGTGAGTAACAAAACTTTATTTCATGAACACTATGTGGACCCACCACAAAAGACTTCCTCGTTATTCTCTGACCTTAGGACGGATTGTGGGATCCAAATTGTGATGAATTTGGAGCAAATTTGAAGGAAGTTGAGAGTTCTTGAGAGTTTGTGAGTTGGAGAGAATTTCAGAAAATTCCACCTAAGTTCTTCACACAATTTCAATCTTTCTTTCTTCTATATAAAGAAGAATACATGAAAATCCAATATGCCATGAAATTGACACTTTAATTGTTGATTAACCAAGAGGATTAGGAGGTAGAAGGTGGGTTAAGGGTGTTTCCAAAACTCCCACCTCCTACTTCATGCAAAATGAAAAATCTCCAAAATTCAAAATGAATTTCTAATTTTCAACTTCTTTATAATTGATTCTATTAATTAATTTTAAATAATATTAATTTAATATTAAATATATAATTAATTAAATAATTTAATTAATTATATTAAATTGATCAATTTTCCACTTGTCTCGACAATTTCCAATCCGATGAATCTTTATTCATGCAATTAATATTTAAATCACATTTAAATATTTTCAACTCTCCATTTTCATTTAGTTCATAATTAAAACGAACAACCCGTAAAACTTACTCATTAAACGAAATTGAATATTTTCAAATTCTTTCATCACACTGTTCTAAGGTTTAGTCCATGAGCTAACAAGGAGACCTAATGGACTTACAGATAATGAGCTCCACTAATCTGAAATTAACCAGCTAAATTCTTTAACCTAGTTGATTAACATTCATTAACTATTGAGACATTCCATTATAGCCCATTAGTTGTATTTTCCTCACTGTAAATATATTTCTGTCCACTTGATATAACCATAATTAGTAAGTCGATCCTTCACAAGTTGTTCATAATTACAACTGGGTCAAAAATTACTGTTTTACCCATGTAATTATATCTTGTTTCTTAAGTTTCACTGATCCTCTAATGAACAATTGGTTTATGATCCAACCATCAAATCAAGTCCCTCTCGAGCCAATGAGAGGGTGGGGCCCCTTGTCCAATACCCGGAGTTAGTACTTAAAGAAACAACTTCTCTACTAACCTAGAATTGGATAGGTGTGAATTCCATTTCGCAAGATTATGTCCCCAACTATCTACTTGGTTTTATCCCTAAAATAGTAGGTTTATTGAGTCGGCAAGAACTCAGGGTACTCTCACCCATGCAAATTAAAGGTAGTCTCAAATAAATAGGAGGTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCATATTGAAATAATCAGTCTTAACAGTAAACGACGTTATAAAGTAAAAGTGATTATCTCATGGTCCGGTCTTATGCAAACACATTGCATAGGATGCCTCCCACTCTCATGTCTCAATATGAATGATATAAAATCACATCGTTTGTATCAAATACAAAGTGGGCCGCACCCATAATGTCTCTAGGATATGGTATCCAGCCTTATCCTTATACTATAGACTGTTTTGGCTATTATCTAAACTTGATCCATTTTTATGTCTACATATAAAGTCTAAGTGTTCAAACTATAGCCAAAAGTTCTTAGTTTATTGGATTTAGGGTTATAATAAATGCAATTCACATTTTCAATAACATCTTTACTGAATAAACCTCGATAACAACTTTATTGAGAATATGTTCAAAGTTTACAAACCACGAGTTTTAGGACATAAAACCCAGCAAAACAATGGGGCGAAACCAAATAAAGACACGTCCTAGGGTGATAATTTCATTGATGGATTAACTAAGTTAATTGTTTAGACCTCGAACTAAGTTTATTCTAACTATAAATTTAAGTCTTTTGTCTAGGTGTCCTCTATCGAGCTCAACCTTTTCTAACAACTAATTATCAACACATCATCATGTAATTAATTAATTAGGCACCATACTAAGTTTCTCTATTATTGATCTCTATTAATCTCTTATCATTTACATGCATATTTGATTAACAATTTAAGATGCTAGTTCCAATCTAATTAGTCTTCTCTCCCAAGCAATGATCAAACTAGAAGTTACCAAGGAACTATGCATAGGACTGAATAGGGAGCGCCGAATACACCAGCTACACCTAACATGTGGAATGGGTGCATAAGGATGTTGTACTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACCAATTAGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAATAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCAAATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTAGGGATAATAGCACTAGAAATAATATTGTTTTCGTAAAGTAGAGATCCAAAAACAAGTTCACGAATACCATCAATATCTACTGGAGGAGTAGAAGGCAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTATTTGGAAACTGTTTTAAGCATTTACTTTTCTAGTTAGAGACCAATGTCTTGGAGTTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTATTCGTTGAAGTTGGTTAGCTACCTCTCATTTTGTTCTATGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCATGCAGCTGCCATAG

mRNA sequence

ATGATACAATTGACAAAGGAAGGAGTAAGGATTTGGTTGGTTATTGCCAACTTTCTGGAAAAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCTCGACCCATAGATCCAAAAACAAGTTCACGAATACCATCAATATCTACTGGAGGAGTAGAAGGCAATAATAAATACAGAAGTTGCGTTAGAGACCAATGTCTTGGAGTTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTCATTTATGGCATGCAGGAAGGGCTCATGCAGCTGCCATAG

Coding sequence (CDS)

ATGATACAATTGACAAAGGAAGGAGTAAGGATTTGGTTGGTTATTGCCAACTTTCTGGAAAAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCTCGACCCATAGATCCAAAAACAAGTTCACGAATACCATCAATATCTACTGGAGGAGTAGAAGGCAATAATAAATACAGAAGTTGCGTTAGAGACCAATGTCTTGGAGTTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTCATTTATGGCATGCAGGAAGGGCTCATGCAGCTGCCATAG

Protein sequence

MIQLTKEGVRIWLVIANFLEKIKKTAVAAATGAEYATAIQGRIPRRKLSSHSRPIDPKTSSRIPSISTGGVEGNNKYRSCVRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYGMQEGLMQLP

Homology

[Close]

BLAST of CcUC02G025970 vs. NCBI nr
Match: PHT36602.1 (Photosystem II CP43 reaction center protein [Capsicum baccatum])

HSP 1 Score: 71.6 bits (174), Expect = 5.2e-09
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQCLG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQCLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. NCBI nr
Match: PHT54980.1 (Photosystem II CP43 reaction center protein [Capsicum baccatum])

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-08
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQCLG NVGSA+GPTGLGKYLMRSPTGEVI+G
Sbjct: 332 VRDQCLGANVGSAKGPTGLGKYLMRSPTGEVIFG 365

[Close]

BLAST of CcUC02G025970 vs. NCBI nr
Match: EXB56228.1 (Photosystem II CP43 chlorophyll apoprotein [Morus notabilis])

HSP 1 Score: 69.3 bits (168), Expect = 2.6e-08
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 77  YRSCVRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           +R  VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 4   FRVSVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 41

[Close]

BLAST of CcUC02G025970 vs. NCBI nr
Match: THU42338.1 (hypothetical protein C4D60_Mb00t11100 [Musa balbisiana])

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-08
Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG---MQEGLMQLP 124
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGE+I+G   M+ G+  LP
Sbjct: 429 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFGIFVLP 474

[Close]

BLAST of CcUC02G025970 vs. NCBI nr
Match: QKJ81379.1 (photosystem II CP43 chlorophyll apoprotein [Allium tuberosum])

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-08
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYGMQEGLMQLP 124
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEV++G   G  Q P
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVMFGANVGSAQGP 361

[Close]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot
Match: A9LYI1 (Photosystem II CP43 reaction center protein OS=Acorus americanus OX=263995 GN=psbC PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot
Match: Q3V538 (Photosystem II CP43 reaction center protein OS=Acorus calamus OX=4465 GN=psbC PE=3 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot
Match: A4QJB1 (Photosystem II CP43 reaction center protein OS=Aethionema cordifolium OX=434059 GN=psbC PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot
Match: A4QJJ5 (Photosystem II CP43 reaction center protein OS=Aethionema grandiflorum OX=72657 GN=psbC PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot
Match: A1E9Z4 (Photosystem II CP43 reaction center protein OS=Agrostis stolonifera OX=63632 GN=psbC PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL
Match: A0A2G2VUH1 (Photosystem II CP43 reaction center protein OS=Capsicum baccatum OX=33114 GN=CQW23_24302 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQCLG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQCLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

[Close]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL
Match: A0A2G2XBX6 (Photosystem II CP43 reaction center protein OS=Capsicum baccatum OX=33114 GN=CQW23_03466 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.4e-09
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQCLG NVGSA+GPTGLGKYLMRSPTGEVI+G
Sbjct: 332 VRDQCLGANVGSAKGPTGLGKYLMRSPTGEVIFG 365

[Close]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL
Match: W9QWB6 (Photosystem II CP43 chlorophyll apoprotein OS=Morus notabilis OX=981085 GN=L484_024765 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 77  YRSCVRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           +R  VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 4   FRVSVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 41

[Close]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL
Match: A0A6M8TXT0 (Photosystem II CP43 reaction center protein OS=Allium tuberosum OX=4683 GN=psbC PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYGMQEGLMQLP 124
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEV++G   G  Q P
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVMFGANVGSAQGP 361

[Close]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL
Match: A0A4S8I2V8 (Photosystem II D2 protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t11100 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG---MQEGLMQLP 124
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGE+I+G   M+ G+  LP
Sbjct: 429 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFGIFVLP 474

[Close]

BLAST of CcUC02G025970 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 81  VRDQCLGVNVGSAQGPTGLGKYLMRSPTGEVIYG 115
           VRDQ LG NVGSAQGPTGLGKYLMRSPTGEVI+G
Sbjct: 319 VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFG 352

The following BLAST results are available for this feature:

BLAST of CcUC02G025970 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT36602.1	5.2e-09	94.12	Photosystem II CP43 reaction center protein [Capsicum baccatum]	[more]
PHT54980.1	1.5e-08	91.18	Photosystem II CP43 reaction center protein [Capsicum baccatum]	[more]
EXB56228.1	2.6e-08	84.21	Photosystem II CP43 chlorophyll apoprotein [Morus notabilis]	[more]
THU42338.1	3.4e-08	73.91	hypothetical protein C4D60_Mb00t11100 [Musa balbisiana]	[more]
QKJ81379.1	3.4e-08	76.74	photosystem II CP43 chlorophyll apoprotein [Allium tuberosum]	[more]

BLAST of CcUC02G025970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9LYI1	1.7e-10	91.18	Photosystem II CP43 reaction center protein OS=Acorus americanus OX=263995 GN=ps...	[more]
Q3V538	1.7e-10	91.18	Photosystem II CP43 reaction center protein OS=Acorus calamus OX=4465 GN=psbC PE...	[more]
A4QJB1	1.7e-10	91.18	Photosystem II CP43 reaction center protein OS=Aethionema cordifolium OX=434059 ...	[more]
A4QJJ5	1.7e-10	91.18	Photosystem II CP43 reaction center protein OS=Aethionema grandiflorum OX=72657 ...	[more]
A1E9Z4	1.7e-10	91.18	Photosystem II CP43 reaction center protein OS=Agrostis stolonifera OX=63632 GN=...	[more]

BLAST of CcUC02G025970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G2VUH1	2.5e-09	94.12	Photosystem II CP43 reaction center protein OS=Capsicum baccatum OX=33114 GN=CQW...	[more]
A0A2G2XBX6	7.4e-09	91.18	Photosystem II CP43 reaction center protein OS=Capsicum baccatum OX=33114 GN=CQW...	[more]
W9QWB6	1.3e-08	84.21	Photosystem II CP43 chlorophyll apoprotein OS=Morus notabilis OX=981085 GN=L484_...	[more]
A0A6M8TXT0	1.6e-08	76.74	Photosystem II CP43 reaction center protein OS=Allium tuberosum OX=4683 GN=psbC ...	[more]
A0A4S8I2V8	1.6e-08	73.91	Photosystem II D2 protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t11100 PE=3 S...	[more]

BLAST of CcUC02G025970 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00280.1	1.2e-11	91.18	photosystem II reaction center protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044900	Photosystem II CP43 reaction centre protein superfamily	GENE3D	1.10.10.670	photosystem ii from thermosynechococcus elongatus	coord: 71..121 e-value: 5.5E-14 score: 53.6
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 59..118 e-value: 2.6E-6 score: 26.4
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 79..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..70
None	No IPR available	PANTHER	PTHR33180:SF16	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 79..115
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 77..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G025970.1	CcUC02G025970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0010242	oxygen evolving activity