CcUC02G025820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G025820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein of unknown function (DUF1218)
Location	CicolChr02: 10951740 .. 10952656 (+)
RNA-Seq Expression	CcUC02G025820
Synteny	CcUC02G025820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAATATAATTTATAATGACTCTGCTTTATTTAAAAGGCCATAAATAGTTCATTTCCTCCTCTCACAAACCTTTCGCTCAACAGCCTTTGCTTTGTTTTTCCCTCTCATAATATAACCAAGTAAATATCATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTACAAATTCATTCTAAACAAAAACACAAAATTCTTTAACCAAAATAGAATTATATAATTGTGATTATTGTTTGATTAGGTGAAGCATCTTCGACTATGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAACAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGTATTTTATTATTTTCTCTTCTTTCTTCATAATTTATATCAATTTTTCAAATTTTATTTTATTTTATTTTATTTTATTTCTGTTTGGAAAGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACGACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAATGGGAAAAAATGGGAATTTTTTCCTTTTTTCTTTTTTCTTTTTTTTTCTTAATTAAAGGTAAATGATGTATTGTCTCATTCATCTCTTATGTGGCAAATCAGACAAAAACTAATCTAATCATTCTTCTTTTCTTCTCTG

mRNA sequence

GCTAAATATAATTTATAATGACTCTGCTTTATTTAAAAGGCCATAAATAGTTCATTTCCTCCTCTCACAAACCTTTCGCTCAACAGCCTTTGCTTTGTTTTTCCCTCTCATAATATAACCAAGTAAATATCATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTGAAGCATCTTCGACTATGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAACAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACGACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAATGGGAAAAAATGGGAATTTTTTCCTTTTTTCTTTTTTCTTTTTTTTTCTTAATTAAAGGTAAATGATGTATTGTCTCATTCATCTCTTATGTGGCAAATCAGACAAAAACTAATCTAATCATTCTTCTTTTCTTCTCTG

Coding sequence (CDS)

ATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTGAAGCATCTTCGACTATGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAACAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACGACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAA

Protein sequence

MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDKSRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE

Homology

[Close]

BLAST of CcUC02G025820 vs. NCBI nr
Match: XP_038902419.1 (uncharacterized protein LOC120089064 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 9.5e-80
Identity = 151/158 (95.57%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           M+LVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MRLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQE+L+KSPPNKQ+SIACLIFTWIILAVGMSMLVIGALGN+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQEELEKSPPNKQLSIACLIFTWIILAVGMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVT TA+E
Sbjct: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTATASE 158

[Close]

BLAST of CcUC02G025820 vs. NCBI nr
Match: XP_004151872.1 (uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical protein Csa_021781 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79
Identity = 150/158 (94.94%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQ++L+KSPPN+QISIACLIFTWIILAVGMSMLVIGA+GN+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. NCBI nr
Match: XP_008455827.1 (PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 3.6e-79
Identity = 149/158 (94.30%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQ++L+KSPPN+QISIACL+FTWIILAVGMSMLVIGA+GN+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. NCBI nr
Match: XP_022944616.1 (uncharacterized protein LOC111449022 [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGN+K
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. NCBI nr
Match: XP_023512382.1 (uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQIS+ACL+FTWIILAV MSMLVIGALGN+K
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. ExPASy TrEMBL
Match: A0A0A0LR43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.3e-79
Identity = 150/158 (94.94%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQ++L+KSPPN+QISIACLIFTWIILAVGMSMLVIGA+GN+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. ExPASy TrEMBL
Match: A0A1S3C1S7 (uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 149/158 (94.30%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQ++L+KSPPN+QISIACL+FTWIILAVGMSMLVIGA+GN+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. ExPASy TrEMBL
Match: A0A6J1FUW3 (uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC111449022 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.9e-76
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGN+K
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. ExPASy TrEMBL
Match: A0A6J1CID0 (uncharacterized protein LOC111011214 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011214 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 141/158 (89.24%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MK+VGVLICLLVVAMDIVAGLLGIEA+IAQNKVK LRLWIFECR+PSEQAFKLGLGAAGL
Sbjct: 1   MKVVGVLICLLVVAMDIVAGLLGIEAEIAQNKVKQLRLWIFECREPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAHIIANLLGGCNCICSQE++QKSPPN+Q+S+ACLIFTWIILAVGMSMLVIG L N+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQEEIQKSPPNRQLSLACLIFTWIILAVGMSMLVIGTLSNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVH LFCVAYYV+ TA E
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHALFCVAYYVSATADE 158

[Close]

BLAST of CcUC02G025820 vs. ExPASy TrEMBL
Match: A0A6J1JAZ6 (uncharacterized protein LOC111484145 OS=Cucurbita maxima OX=3661 GN=LOC111484145 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 141/158 (89.24%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGN+K
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHG F VAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGSFSVAYYVTATAAE 158

[Close]

BLAST of CcUC02G025820 vs. TAIR 10
Match: AT2G32280.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-60
Identity = 98/157 (62.42%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 2   KLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLL 61
           K+ G+L+CL++V +D+ A +LGI+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L
Sbjct: 3   KIGGILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLWLFECREPSQDAFRLGLGAAAIL 62

Query: 62  GLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDKS 121
            +AH++ NL+GGC CICSQ++ Q+S   +QIS+ACL+ TWI+ AVG   +VIG + N KS
Sbjct: 63  VMAHVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNSKS 122

Query: 122 RATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           R++CGFTHHHFLSIGGILCF+H LFCVAYYV+ TAA+
Sbjct: 123 RSSCGFTHHHFLSIGGILCFLHALFCVAYYVSATAAK 159

[Close]

BLAST of CcUC02G025820 vs. TAIR 10
Match: AT4G21310.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55
Identity = 99/154 (64.29%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGL 63
           VG  IC+L++AMD+ AG+LGIEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL L
Sbjct: 5   VGFFICILILAMDVSAGILGIEAEIAQNKVKHLKMWIFECRDPSYTAFKYGLAACILLVL 64

Query: 64  AHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNDKSRA 123
           AH+ AN LGGC C+ S++ L+KS  NKQ+++A LIFTWIILA+  SML++G + N +SR 
Sbjct: 65  AHVTANFLGGCLCVASRQDLEKSSANKQLAVASLIFTWIILAIAFSMLIVGTMANSRSRK 124

Query: 124 TCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAA 158
            CG +HH  LSIGGILCFVHGLF VAYY++ TA+
Sbjct: 125 NCGISHHRVLSIGGILCFVHGLFAVAYYISATAS 158

[Close]

BLAST of CcUC02G025820 vs. TAIR 10
Match: AT1G11500.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26
Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLG 63
           +G L+ ++++  DI A +LGIEA+IAQ+K       +H R     C R PS+ AF  G+ 
Sbjct: 5   LGFLVSVVIICADITATVLGIEAEIAQSKAPHHHHQQHSRHSGSGCRRSPSDGAFAEGVA 64

Query: 64  AAGLLGLAHIIANLLGGCNCICSQEQLQKSPPNKQISIACLIFTWIILAVGMSMLVIGAL 123
           A  LL + H++AN+LGGC  I S++  +++  NK +++A L+ +WI   V  S L+IG L
Sbjct: 65  AMVLLFIVHVLANVLGGCTYIRSKQDFKRATANKILAVAFLVLSWIFFVVSYSTLMIGTL 124

Query: 124 GNDKSRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
            N ++   C   H  F  IGGI C  HG+   AYYV+  AA+
Sbjct: 125 ANSRTNRLCSLPHRWFFLIGGIFCLGHGVVTSAYYVSAIAAK 166

[Close]

BLAST of CcUC02G025820 vs. TAIR 10
Match: AT1G05291.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 6   VLICL-LVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLA 65
           +++C+ L V +DIVAG +G++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  A
Sbjct: 17  IIVCIVLTVGLDIVAGFVGLQAQAAQQYVKHDKL---ECKAPSKTAFVLGIIAVSCLATA 76

Query: 66  HIIANLLGGCNCICSQEQLQKSPPNK---QISIACLIFTWIILAVGMSMLVIGALGNDKS 125
           H+ AN++ GC+     + L   P NK     ++ACL   W++   G  +L  G   N +S
Sbjct: 77  HVSANVI-GCSISNLFQALGALPKNKITTYFNMACLFLIWVVGIFGALILANGIWSNTES 136

Query: 126 RATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAA 158
           R  C FT++H  SIGG +CF+H +    YY+++  A
Sbjct: 137 RIRCRFTNNHVFSIGGKVCFLHAIVSGIYYISSIVA 168

The following BLAST results are available for this feature:

BLAST of CcUC02G025820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902419.1	9.5e-80	95.57	uncharacterized protein LOC120089064 [Benincasa hispida]	[more]
XP_004151872.1	2.8e-79	94.94	uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical ...	[more]
XP_008455827.1	3.6e-79	94.30	PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]	[more]
XP_022944616.1	1.4e-75	90.51	uncharacterized protein LOC111449022 [Cucurbita moschata]	[more]
XP_023512382.1	1.9e-75	89.87	uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G025820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G025820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR43	1.3e-79	94.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1	[more]
A0A1S3C1S7	1.7e-79	94.30	uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=...	[more]
A0A6J1FUW3	6.9e-76	90.51	uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A6J1CID0	1.3e-74	89.24	uncharacterized protein LOC111011214 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JAZ6	4.9e-74	89.24	uncharacterized protein LOC111484145 OS=Cucurbita maxima OX=3661 GN=LOC111484145...	[more]

BLAST of CcUC02G025820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32280.1	2.3e-60	62.42	Protein of unknown function (DUF1218)	[more]
AT4G21310.1	1.3e-55	64.29	Protein of unknown function (DUF1218)	[more]
AT1G11500.1	2.9e-26	39.51	Protein of unknown function (DUF1218)	[more]
AT1G05291.1	1.5e-22	38.46	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 57..144 e-value: 1.8E-19 score: 70.0
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..157
None	No IPR available	PANTHER	PTHR31769:SF54	BNAA05G10770D PROTEIN	coord: 2..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G025820.1	CcUC02G025820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010588	cotyledon vascular tissue pattern formation
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0010087	phloem or xylem histogenesis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane