CcUC02G025240 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G025240
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransmembrane protein 18
LocationCicolChr02: 9793203 .. 9797318 (-)
RNA-Seq ExpressionCcUC02G025240
SyntenyCcUC02G025240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAAAATTGACGAAGCAAAAGAAATGAAATTTAGGCTGAAAATGGTGAGCATTTATAATTTCTGGAGTTTTCCAGAGGGTTTGAGGGGTAAACGGCGTCGTTTCATATCGTGATTTCAGATCCGAGCTCGAGGTTTTGGGTTGAACAAGAACCGAAGATCAGACGACGAAATCTACACAGCTCACCGCTGAGACTGTAAATTCCATTATCGAATCGAAACAGATCTTTCGGACCCTTCAACTGATGGAGGAGTTGAGATCTGCAATGGAAGAACATATGGACCAAATGGCGGATCTGATTCACAAACTTTCCTCCGAACTCCGATCCAGTCTCCGTCCCGCCGTCGATAATTTCGTCGGTTTCTTCCACGCTATTGACTGGAAGGTAAAATTCACTCAAACCCCATCAAAAGACTTTTATCTTATTTTGCTTCTTTTACCTGTAATTCGATCTTGTTTCCTGCTCTGTGGTTCTTTGAAGTTCTTTCTCAATTTGAATTGTTTTTATGTATTCTGTGACATTTTGCAGGAACCTTGGTTGATGGGATTATTGGGTTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTTCAGATGTTCTTGTTCCTCCTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGTAATGTAATAGCATTGTTCAAGGTTTTGCTATTTTTAGTTGTTTGATTGCTGTTCATATTGCATCCTGGCAAAGTAGTGAGTTATGGTCTAGCAATCTTTATTAACTCTTGAGCTTAGAGATGGATTCTGAGGTTAGAATATCTCTTTGGAAATTATTTGCTGCATCAAGGTTGCAATTATATAGTTAGTTATGTGTGCATAATGTACATATTGCATCCTATAGTAGTGAGTTTTGCTCTAGCCATTTAAGGTATGGAAATATACTACCTCTTGAGCTTAAAGATGAACTCTGAGGTTTGAATGTATTTTTGGAGTCATGCTGCAAGGTTGCAATAATACAATCATATGATTACATTTGCAGGCTTCAGTTGTTGATTGATGTTTCTTATGTGTGTATGATTTCCAACCATAATGCTATTTGGTTTAACCTGGTTGCTTTTTATTTGACTATTTTAAATAAATAGTTCTCTCTCTTTTTCAATCTCTTTTGGCTTGTTGTAGGAAGTGTAAGGTGTATGATCAAATGTTGTCAATGTCATATATTTCAATTGTGTACTAGAAAGGAATCCCCTTGCATACCACAAAAATTCTCTCATGCTTGTGGTACATTTCAGATTTACATTTTACATGTTGATATGTACATCTTTCATGTATTTCAAGGAGAAGACCCCCTTTTTTGCATTTCACAGAAGTCCTTTCTTGTTCACATTCATATTTTGCAAGCTCATATACACATTTTCATGTACTTCTCAACTCCAATTGTTCTTCATTTCAAGGGATTAGAAATCCATATTTGGAGTACTTATACACTTTAGAACTTAAAGGACACAATTGTACAACTCATAGAACAGATCCTGTTCAAATAAGGTCACAAGTAGTTACATTTTTATTTGTCATGCAGTGTCTGGTGTATATTTTGCTGAAAGAATCAATAGAATCTTGGGCAAAAACTGGAAGAACTTCGCCACCCAGAACTATTTTGATCCAAATGGAGTTTTCTTATCAGCACTCTGGTCTGGGCCACTGCTTGTAATTTCAATGATAATCCTGGCAAGTGCTTGCTATTTCTTGTTTTCATCATGTCCATGGTAACACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCCACCCCCAAAAAAAAGAAAAAATGAAAAATCTGGGATGAGTTATTTTTATCTCATTTGTTTGTTATCTAGTTTTCTGGGTTAGGAACACCTAACTGAACCCTCATTTCTGTATGACAGATAAACACACTCTTTACGTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTTTCACAGAGTAAAGAAGATTGACCCCAAAAGAGAAGTTTTTAGCTTTGATGTCTTTTGCTGGTAGCTTGTAGCTGTGTATCTTATCCTTCACAGAGATCGATGAACTGATACGAGGAGCGGTTTTAGTTATTCTTTTTTTTTTTTCTCTTATTTATTGACTAGAATCTCCATTGATATTATTGTGACCAACTTTATACGACATTCACTCACTTTATGTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTCATTACTGATTTCATTCACTGAATTTCTTGGACAGTTATAGGACTAAAATTGACATTTCTTCATCAAGGTTCGACAATATATTTTCTCCAATCTCTTGGAAACGTAGATGGAATGCTGAAAATATTGATGTTATTACGTATGAGTCTATGACAGATTCAAACTAGCATGCTGTTTGTTACATGAGAGCTCACCTCCGTTTACACTTGTTTCATCTGGGGTTGTTTCAAACGAAGCTTCAAAGGCAACATTATTGCCATAAATTTGGCAAGTTGGACTATTATTAGTGTTCAAATTTTTCCAAAGGGTATGTTATACAGGTTTTGTCCTGATGAGAAAAACATATCCTTGACTTTTAAAACCTAAAATCCATTTGATTTTTAAATATGGATATACCATGAACAATATATGCAATTATCTTAAAGTGAATTTTTTTATTTTTTTCTTTTTTACAACATGTGGAGTGGAGAAATTGGACTCTTGACTTTAAGGTTAATAATACAAGTACTATGTAAGTTGAACTATGCTCATTTTAGCATGAGGTTACATTTCATTTTATAACTAAATAGAATTTAAGAATCTATATATTCATGTTATATGCATGGTTGGCCATAGTAGATGCATTATTCATGTTATATGCATGGTTGGCCATAGTAGATGCATGGTTGATCAAGAAAACAAGTGGATCGTTTCTTCTTTCTCACATTAATAAATAAATTGATAAATTGATCTTCCAAAACTAGAATGAATATGTCTTAATCCTTGCTTTTTTTTTTCTTTTTTGGGGGAAAGCAAGCTATGTGCATTTTAAGTGAATTAGAAAACCCAACTATAGAACAACAATCAAGGAAAATACTCAAGTGTATCTTGGATAGCATCTATTAGGGTCGTTCAATTGATCTAACAACTCCGAACTACCCAATCTAAATTGTAAGGGTTGGGCTGAATTAGTTTGTTCTTTGGTTGGGTTTGGTCGGTTTAACTTTTTTTATTTTTGTCAAGGGTTGGGTTGGATTAAATTTTTTTCATTTTTGTCGGGCTGGGTTGGGTCTTGAGTTGGCTAAAAGACAAATTGGTTTGACCCAACCCTCCCTGAATCACATCTCTATTAATAAGGGCTTTTTACATAAAGGGACCAAATAGAAGGTCTATATTACACTTATGTCCAGAAGTTACTAATTTTTTCATAAATGGACCAACGAGTTGGTATTTTACAAAAAAATTGAAGTGTAGTGACCTTTGAGCCCTTGATTTCAATTTCAATTTTTTTTAAAAAAAAAAAATATAGAATTTATGATAAAACCTAGATCTCCCAAATACTTACAACTTTCTATCTTCTTCAAATTCTCTCTCAAAACTCTCTCATATTTCTAGTGTGTGACGATGGCATGGGTGAAACAAGAGTTCTAGATGGTGACGGAGAGCTTCTAGTCGAAGCTACAATGGCCAAAAAATGAGCAGATGAAGTGGCGGGTGCCGGTTGCTGAGAGTGAAAAACTCGTTGAGCCGCTTCTCACGACAGTGCAAGTTACAAGTGTCTAGCGATGGGAGATGGATGTTGAACAACGGCGTGAACAGATTCGACGCGGGGCAAATCAACCAATCCAATGAACAAATCCCCTGTGGATCCAATGCGGGGCAAACAAATCCTCCTCCCTCTCTTTTTCTTCTTCCCAATGGTGCAAGTTACAGCCAACTTGCGATGGGAGATGGACGTGGAACAACGACGCGAGCCGATCCGGCACGGACTAAGGAGGAATGCACAACGGTAGAG

mRNA sequence

ATGCTGAAAATTGACGAAGCAAAAGAAATGAAATTTAGGCTGAAAATGGTGAGCATTTATAATTTCTGGAGTTTTCCAGAGGGTTTGAGGGATCAGACGACGAAATCTACACAGCTCACCGCTGAGACTGTAAATTCCATTATCGAATCGAAACAGATCTTTCGGACCCTTCAACTGATGGAGGAGTTGAGATCTGCAATGGAAGAACATATGGACCAAATGGCGGATCTGATTCACAAACTTTCCTCCGAACTCCGATCCAGTCTCCGTCCCGCCGTCGATAATTTCGTCGGTTTCTTCCACGCTATTGACTGGAAGGAACCTTGGTTGATGGGATTATTGGGTTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTTCAGATGTTCTTGTTCCTCCTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGTAATGTAATAGCATTGTTCAAGTGCAAGTTACAAGTGTCTAGCGATGGGAGATGGATGTTGAACAACGGCGTGAACAGATTCGACGCGGGGCAAATCAACCAATCCAATGAACAAATCCCCTGTGGATCCAATGCGGGGCAAACAAATCCTCCTCCCTCTCTTTTTCTTCTTCCCAATGGTGCAAGTTACAGCCAACTTGCGATGGGAGATGGACGTGGAACAACGACGCGAGCCGATCCGGCACGGACTAAGGAGGAATGCACAACGGTAGAG

Coding sequence (CDS)

ATGCTGAAAATTGACGAAGCAAAAGAAATGAAATTTAGGCTGAAAATGGTGAGCATTTATAATTTCTGGAGTTTTCCAGAGGGTTTGAGGGATCAGACGACGAAATCTACACAGCTCACCGCTGAGACTGTAAATTCCATTATCGAATCGAAACAGATCTTTCGGACCCTTCAACTGATGGAGGAGTTGAGATCTGCAATGGAAGAACATATGGACCAAATGGCGGATCTGATTCACAAACTTTCCTCCGAACTCCGATCCAGTCTCCGTCCCGCCGTCGATAATTTCGTCGGTTTCTTCCACGCTATTGACTGGAAGGAACCTTGGTTGATGGGATTATTGGGTTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTTCAGATGTTCTTGTTCCTCCTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGTAATGTAATAGCATTGTTCAAGTGCAAGTTACAAGTGTCTAGCGATGGGAGATGGATGTTGAACAACGGCGTGAACAGATTCGACGCGGGGCAAATCAACCAATCCAATGAACAAATCCCCTGTGGATCCAATGCGGGGCAAACAAATCCTCCTCCCTCTCTTTTTCTTCTTCCCAATGGTGCAAGTTACAGCCAACTTGCGATGGGAGATGGACGTGGAACAACGACGCGAGCCGATCCGGCACGGACTAAGGAGGAATGCACAACGGTAGAG

Protein sequence

MLKIDEAKEMKFRLKMVSIYNFWSFPEGLRDQTTKSTQLTAETVNSIIESKQIFRTLQLMEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLLARMIFSPICSFCCNVIALFKCKLQVSSDGRWMLNNGVNRFDAGQINQSNEQIPCGSNAGQTNPPPSLFLLPNGASYSQLAMGDGRGTTTRADPARTKEECTTVE
Homology
[Close]
BLAST of CcUC02G025240 vs. NCBI nr
Match: XP_038900756.1 (transmembrane protein 18 [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 6.4e-35
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADLI K+SSELRS +RPAVDNFVGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLIQKISSELRSGIRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRKRTNFQMFLFLLA
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. NCBI nr
Match: KAG7033663.1 (Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-34
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADL+ KLSSELRS LRPAVDNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRK TNFQMFLFLLA
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. NCBI nr
Match: XP_022949841.1 (transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane protein 18 [Cucurbita maxima] >KAG6603481.1 Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-34
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADL+ KLSSELRS LRPAVDNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRK TNFQMFLFLLA
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. NCBI nr
Match: XP_023543279.1 (transmembrane protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 4.2e-34
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADL+ KLSSELRS LRPAVDNF+GFFHAIDWKEPWL+GLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLIGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRK TNFQMFLFLLA
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. NCBI nr
Match: XP_022156188.1 (transmembrane protein 18 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 7.1e-34
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADLIHKLSSELRS LRPAVDNF+GFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITI TRKRTNFQMFLFLLA
Sbjct: 61  LLIITIVTRKRTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match: A0A6J1ISM9 (Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 7.0e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADL+ KLSSELRS LRPAVDNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRK TNFQMFLFLLA
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match: A0A6J1GD63 (Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 7.0e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADL+ KLSSELRS LRPAVDNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRK TNFQMFLFLLA
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match: A0A6J1DPY2 (Transmembrane protein 18 OS=Momordica charantia OX=3673 GN=LOC111023137 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEELRSAMEEHMDQMADLIHKLSSELRS LRPAVDNF+GFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITI TRKRTNFQMFLFLLA
Sbjct: 61  LLIITIVTRKRTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match: A0A5A7VF36 (Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001270 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-34
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           M+ELRSAMEEHMDQM+DLI KLSSELRS LRPA+DNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRKRTNFQMFLFL A
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFA 82

[Close]
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match: A0A0A0LN62 (Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-34
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           M+ELRS MEEHMDQM+DLI KLSSELRS LRPA+DNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LLIITIFTRKRTNFQMFLFLLA
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. TAIR 10
Match: AT1G34350.1 (unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-27
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEE+RSAME+ +D +ADL+ KLS ELR+  +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LL++T+ +R+  NF MFLFLLA
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLA 82

[Close]
BLAST of CcUC02G025240 vs. TAIR 10
Match: AT1G34350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-27
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 60  MEELRSAMEEHMDQMADLIHKLSSELRSSLRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 119
           MEE+RSAME+ +D +ADL+ KLS ELR+  +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 120 LLIITIFTRKRTNFQMFLFLLA 142
           LL++T+ +R+  NF MFLFLLA
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLA 82

The following BLAST results are available for this feature:
BLAST of CcUC02G025240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900756.16.4e-3595.12transmembrane protein 18 [Benincasa hispida][more]
KAG7033663.11.4e-3493.90Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022949841.11.4e-3493.90transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane prot... [more]
XP_023543279.14.2e-3492.68transmembrane protein 18 [Cucurbita pepo subsp. pepo][more]
XP_022156188.17.1e-3493.90transmembrane protein 18 [Momordica charantia][more]
BLAST of CcUC02G025240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC02G025240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ISM97.0e-3593.90Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1[more]
A0A6J1GD637.0e-3593.90Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1[more]
A0A6J1DPY23.4e-3493.90Transmembrane protein 18 OS=Momordica charantia OX=3673 GN=LOC111023137 PE=3 SV=... [more]
A0A5A7VF364.5e-3491.46Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0LN624.5e-3491.46Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1[more]
BLAST of CcUC02G025240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G34350.11.8e-2765.85unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; B... [more]
AT1G34350.21.8e-2765.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..244
NoneNo IPR availablePANTHERPTHR22593TRANSMEMBRANE PROTEIN 18coord: 60..148
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 60..148
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 99..143
e-value: 3.6E-12
score: 46.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G025240.1CcUC02G025240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0052543 callose deposition in cell wall
biological_process GO:0009846 pollen germination
biological_process GO:0009860 pollen tube growth
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005640 nuclear outer membrane