CcUC02G024240 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCGTATTAAATCCATTGAACCTGAATGGATTAACGCGCGTTCAGAAATTGGAGCTTCTCGAGTTATCGGTCTTACCGCTTCACCTTCGCTTTATCCATTTTTCGAACGCAAAAACACAACCTATCGTCACTTCCGGCCATGGCTTTCGTCTCCACCTTCATCTCCGGCGAACCGCCCCTCCTTGTCGCCATAGCCTTCCCCACCGCCTCCTCTGTCAAGCATCCCTGTCAACTGCCTCTGCCTAATTTGCGCTTCGCCCGCACCGTCACCTTCGCTTCCGCCTCCAACCAAGCCACTGCCTCCCGCCGGCAGCCCCGTGGCATCATGAAGCCCCGTAGAGTTTCGCCGGAGATGCAGGCGCTTGTCGGCGCTCCTGAGATTTCCCGCACCCAAGCCCTGAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGGTAGAATCTCTCTTCCTCTGTCGTCTTTCGTTTCTCTTTTTCCTTCCATTTTGTTTCCCTTTCATTCGTCTGTCACTGTTACTAGTTAATTTGAGAATAGGCTTTTCTGTGATTCTTTTTTTCCCCTCGAGTTTTTGGGAATTTCTTACTATGTTCTTTCTGGCATGCGCTGTAATGATCATTAGATTATGTTTCTTCAACTCTTTATGCTTTGTTTTGAATATTTTTAGATGTGGCCTTTTTTATTAGCGAAGTTTGTATGTTTAGGAGATTTTTGCTGTGAGTTGTTGGGTTCTGAGGAGGTTGTATGTGAAGTTTGTTTTGAAGATTTTTGTTCTGAAATGAGGGTTTTGGATTGTTGATCTTTGAAACTTTCTTACTGTATTCTTGTTAGATTGTGCTTTAATGATCATTGGATGAATCGGTTTAGATGTGGCATGTGATGTGGTTATTGAGTTTGAGGCTTTTAAGATATCTGAAGAGGTTTTCCTAGTTAACTCTTTTCTGAGTTGTGCATTTGTTTTCAAAGACTTGGAACAGTTCTAGAAAAACTTATGTTCATTTTTTGGTTTTCAAATATATCAAAGATTGAATCCAACCATTTCATTGATGTTTTATGAACGTAAATACCTTCTATTTGGATAAGATATACATCATCTAAAATTTAAATTTGCTAAAGGTTCTAATTATAGCATCTCTTTGTGTGCTCACCATACACTCTCATTGCATCGTTTTTACACAAATTTCTGTACAAGCATTCTCATTGTCTCTATAGTTTCTTAGTCTCTCTGTTTCACTCTCTAGGCATTTCTTCTTATTTGCTCTCTTCATAAACCCTCTCCCACTTTCTCATCGGATTCTTACCGTTCTTTATTCCTTTCCACATTCTCATCGGATTCTTACCGTTCTTTATTCCTTTCCACATTTCTATCCCTAATTGAGTTCTCCATTATGTATTTACCTTTCGATCTAACTCGATAATGTTATGGTATTTCTTCTTGGAACAGCTGTCTGGGGTTCCTCGGCATGTTTATCAGCCCTTGCTCTTGTGATTTTGATAACTAAGGATTATGGGAATCCTATATTCACTTGAGTTCCTTGAGTTCTCTTACATTACTCCATTAAACTTGTGCTTTCTTTGGCTAAATACTGCCTGGTGTTTCACAAAAGAACAAAAAATTGGTATGATAGTTGCCTTCTTAAAAATCAGTGGTTTGAAGCACAGAACCCGAAGTCAAGTTTATTTGTTTTGTTTCTGATTATATTCTTTCTTTTCTTTGCTTATTTATTTATTTATTTTAATAATTATATTCTTCATTCTTTTAGAAACCTAGCGACAAGAAAGTCATAATTTGTGACGAGAAGCTGAAGAATATATTTGGAGGGAAAGATGAAGTTGGATTTCTGGAGATTGCAGGGTTAATAAGTCCACACTTTCTATAATGATTTGAAGAATGGAAGATAGGCATCTGGGACCTTCAGTTCAGTCCATGAAGATGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTGTGAGACTCTCTCAACTCAGGTATTGCTCACTGAATCCTGTAGTTCAGAGCCCACTTTATGTTTAGTAGTTGGATAGAGAGAAAGAAGGCTTTGTAAGAACTTTGTTTGGAGGTTTATGTAGGGATTGTTATATGGAAATCTTTGGCTAGTAGTTATTAGTTTTTGGGTAAAATGTCTCACTTTTGTATTCGACCTGCTTGATTTTTGTGCTTCTATTTGCCCTGGTCTTGATGATTTTAGCTGTTGTTAATGAAATTGTATGATTTCAACACTATCCATAAAGCTACTTCGTCTTTTTG ATGGTATCAAATTGGAGCTTCTCGAGTTATCGGTCTTACCGCTTCACCTTCGCTTTATCCATTTTTCGAACGCAAAAACACAACCTATCGTCACTTCCGGCCATGGCTTTCGTCTCCACCTTCATCTCCGGCGAACCGCCCCTCCTTGTCGCCATAGCCTTCCCCACCGCCTCCTCTGTCAAGCATCCCTGTCAACTGCCTCTGCCTAATTTGCGCTTCGCCCGCACCGTCACCTTCGCTTCCGCCTCCAACCAAGCCACTGCCTCCCGCCGGCAGCCCCGTGGCATCATGAAGCCCCGTAGAGTTTCGCCGGAGATGCAGGCGCTTGTCGGCGCTCCTGAGATTTCCCGCACCCAAGCCCTGAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGAAACCTAGCGACAAGAAAGTCATAATTTGTGACGAGAAGCTGAAGAATATATTTGGAGGGAAAGATGAAGTTGGATTTCTGGAGATTGCAGGGTTAATAAGTCCACACTTTCTATAATGATTTGAAGAATGGAAGATAGGCATCTGGGACCTTCAGTTCAGTCCATGAAGATGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTGTGAGACTCTCTCAACTCAGGTATTGCTCACTGAATCCTGTAGTTCAGAGCCCACTTTATGTTTAGTAGTTGGATAGAGAGAAAGAAGGCTTTGTAAGAACTTTGTTTGGAGGTTTATGTAGGGATTGTTATATGGAAATCTTTGGCTAGTAGTTATTAGTTTTTGGGTAAAATGTCTCACTTTTGTATTCGACCTGCTTGATTTTTGTGCTTCTATTTGCCCTGGTCTTGATGATTTTAGCTGTTGTTAATGAAATTGTATGATTTCAACACTATCCATAAAGCTACTTCGTCTTTTTG ATGGTATCAAATTGGAGCTTCTCGAGTTATCGGTCTTACCGCTTCACCTTCGCTTTATCCATTTTTCGAACGCAAAAACACAACCTATCGTCACTTCCGGCCATGGCTTTCGTCTCCACCTTCATCTCCGGCGAACCGCCCCTCCTTGTCGCCATAGCCTTCCCCACCGCCTCCTCTGTCAAGCATCCCTGTCAACTGCCTCTGCCTAATTTGCGCTTCGCCCGCACCGTCACCTTCGCTTCCGCCTCCAACCAAGCCACTGCCTCCCGCCGGCAGCCCCGTGGCATCATGAAGCCCCGTAGAGTTTCGCCGGAGATGCAGGCGCTTGTCGGCGCTCCTGAGATTTCCCGCACCCAAGCCCTGAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGAAACCTAGCGACAAGAAAGTCATAATTTGTGACGAGAAGCTGAAGAATATATTTGGAGGGAAAGATGAAGTTGGATTTCTGGAGATTGCAGGGTTAATAAGTCCACACTTTCTATAA MVSNWSFSSYRSYRFTFALSIFRTQKHNLSSLPAMAFVSTFISGEPPLLVAIAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL Homology
BLAST of CcUC02G024240 vs. NCBI nr
Match: XP_038888173.1 (uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 7.4e-62 Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of CcUC02G024240 vs. NCBI nr
Match: XP_022952608.1 (uncharacterized protein LOC111455244 [Cucurbita moschata]) HSP 1 Score: 238.8 bits (608), Expect = 3.5e-59 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of CcUC02G024240 vs. NCBI nr
Match: XP_023553864.1 (uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 3.5e-59 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of CcUC02G024240 vs. NCBI nr
Match: KAG6571933.1 (hypothetical protein SDJN03_28661, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011621.1 TRI1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.7 bits (605), Expect = 7.7e-59 Identity = 119/138 (86.23%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of CcUC02G024240 vs. NCBI nr
Match: XP_022972543.1 (uncharacterized protein LOC111471082 [Cucurbita maxima]) HSP 1 Score: 236.9 bits (603), Expect = 1.3e-58 Identity = 120/138 (86.96%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10 Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 9.0e-10 Identity = 25/55 (45.45%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08 Identity = 25/52 (48.08%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy TrEMBL
Match: A0A6J1GL33 (uncharacterized protein LOC111455244 OS=Cucurbita moschata OX=3662 GN=LOC111455244 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.7e-59 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy TrEMBL
Match: A0A6J1IAA1 (uncharacterized protein LOC111471082 OS=Cucurbita maxima OX=3661 GN=LOC111471082 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 6.4e-59 Identity = 120/138 (86.96%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy TrEMBL
Match: A0A6J1JNZ3 (uncharacterized protein LOC111486197 OS=Cucurbita maxima OX=3661 GN=LOC111486197 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 7.0e-58 Identity = 120/138 (86.96%), Postives = 124/138 (89.86%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy TrEMBL
Match: A0A6J1EIX1 (uncharacterized protein LOC111434699 OS=Cucurbita moschata OX=3662 GN=LOC111434699 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.2e-57 Identity = 120/138 (86.96%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC02G024240 vs. ExPASy TrEMBL
Match: A0A6J1D4Q4 (uncharacterized protein LOC111017291 OS=Momordica charantia OX=3673 GN=LOC111017291 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55 Identity = 125/171 (73.10%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of CcUC02G024240 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CcUC02G024240 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 2.5e-31 Identity = 74/126 (58.73%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of CcUC02G024240 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 95.5 bits (236), Expect = 4.4e-20 Identity = 60/144 (41.67%), Postives = 79/144 (54.86%), Query Frame = 0
BLAST of CcUC02G024240 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 3.7e-19 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of CcUC02G024240 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 8.3e-19 Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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