CcUC02G023540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G023540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Thioredoxin M3
Location	CicolChr02: 6486417 .. 6489280 (-)
RNA-Seq Expression	CcUC02G023540
Synteny	CcUC02G023540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATCGCGTTCTGCGGCTCCGCCCACTGAATTTTCCATCCATCTTCATCTTCTTCTTCCTTATGCCACTTTCCATTTCGAATCTTCTTTCCTTCCACCTTCTTCTCCTTCTTCTCTCTTGACCATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCATCTCCCCTCATTCTAATCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCGGCGTTACGGCTCGAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGGTTTTCCTCTTCTCTCTGCTTTTTCTATTGTTTAGTTTGCATGTTACACTCGCCGATTTGGTATATTTCTCTAATTTTCTGCTGAAAACATGACTTACTATAGGTTTTGTTACGTTCTAGATATGAGATCTTGATTTGTTGCGATTTTCTTATTTCGGATTTAGTATAATTAATGCGCTCTATGTATTGGAGGGATTTAATTGTTTATGGAAATTTAAATGACTGAACGAGATTGACTTTGTCTACATGTTAGATGATTGATTTCAAATACAAGATCTCATCATGTGTTTTTTTGGTTTAAGTAATGTTGGAAATGCTCGTATTAATTCGAGATCCAATCTTAACTTTGCGGTGCAAAGGCAAGCTGGAATAGTGCACATTCCTGAAATAGAAGAATTTCAAGATCTGTTTAATGTATTAAGAGAAATATGCGTTAATCGTGGTAGTTATTTTCCATATAGTTTTAGGAGAACATTTGATTTATTCCTCTTTTGTATTGTTTCAATCTTTAAACGTTTTTGCCTATTTTTGACTTGGTGTTATTTTGATGATTTTATCAAGAGAAAATCTGAAAAATGCAACTTCTTGGTAACTACTGGATAGGAAAGGTTTAACTATTGCCTTATTAGGGTTTTCAATTATAGAATGGTTGAAGATATGATAGAAACAGGGCATGGACGACTATATTCCGTAGCAATCTGATGTCTGTTACTTACAGATAGAACTACCCTTAGATCCAAGTTAAAACAAATCTTGTGGCTGCTTAGTGCTTAGAAACTGCACTTGCATTTGCATATGATTTAAGTTGAGCTTGTCAAGTATTGTAACTCTTTTCATCGGCTTCCAAGAGTTAGTAATTTTGAGTGAGATCTTTCTCGCTTTGGGTTTACTCTTTTTTTTTTAATTGTTACTGTACGTGCATTTGATTTCCAAGTTTATAGAGTAAATCTTCATTCTTATTTGTTCCGATCTGACGAGGCAAGAGTGCCTTTTCTGACATTCTGGCCCACATCTTGTTGAAATGATAGTACATAGATTATTCTTGGTCATTTTTCATTCATTGTATTTCGTACTTAATATATATATGGTTTTGTTGTATGTTCCCCTTTAATTTATAACTGAAACATGAACTTTATCAAGTGTACCTTTGTTTTTGAATGATGTATTCCAGTTTATATTAATACTTCATCTTTTTTCTTGTCCAGAGTGTGCATGCGATATACCATCTTTTAAAAAAGAAAAAAATAAATACACACACACACACAATATCAATCTCTTTGGTTCTCTTATTTTGTTAGAAAGGGAAGAAAAATGTTAAGCTAAATTATTTTAGGAATCATTTGCGTGTGGAGCTAGTATCTCCAACGAATAGATTATCATGATAGCCATATTTTTTGCATCATTAAAAGCCATCCTCCCTGGTGCTATGCCTTTTTTATCCAGTGAATTATTCTTTCCAAGTCGTTAAACCTTACTGGCATACTATGGAAATTCCTAATTGATAAAGTATGTTACTTATGGTATCATTAATAGATTACTCTCTTGCAACTATGTGAGAACCTTAGTATTAAAATTTTTTATGCTCGTTGGAATCCATTGTTAAATTGATAAAATTGGTGTACCAATATGGCTTTCTATCTGCCAACTTGAGCATAGTTCAACTGGTTTAGGGTATTGAGCATAGTTCAACTGGTTTAAGGATATATACCCTTGATACCCTCGATGAAGAGGATAGAGGTTCAAATCCTCTCATCCCACATGTTAAACTAAAAGAAAAATTGGACGTCCATCCCCAGAATGCCTTTCTGAATAATCTTGCCATTGTCATACACAGCTGAGATGGTTACTAAAGACTCGTGGAATAAAATGATTCTAGAGAGCGAAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGCAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACAACGATTTGCAAATAGCTGAAGACTATGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGCGATAGCGTGATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTCCTCAAGCAGTAGGATACATGACCAACCAAATCGGATATCTTTGGTAAGGTTGACCAGTTTGATTGTGTGAGTTGGTTGGCTATTTTGTTGCTAAAGCTTTCCACTGGGTTACTAGTTCTTGAGCTGTATATAATAAATATAGCTTTAATCCCAAGTTTCTTACTGTAGTTGAATGGATTGTATAGCCCTCATTGTTGTGCTGTCAAATTGTGATAAAACATTGCTGCATTGCAATCCACACGTCACTGTAATGGCTTTTTGGTGAAGATTACTTAGGAGTCGAACCATTTTCTTTGAAAAAAAATGCATCCTTTTCTTACTATTATTGTTTGTTTTAGTACAACAAGGGGTATGAGGGTTTAAACCTCCAAGTGAAAAGCTACATGTCAATTACTGTATTTTTTGTTAATTATGTCATGC

mRNA sequence

TCTATCGCGTTCTGCGGCTCCGCCCACTGAATTTTCCATCCATCTTCATCTTCTTCTTCCTTATGCCACTTTCCATTTCGAATCTTCTTTCCTTCCACCTTCTTCTCCTTCTTCTCTCTTGACCATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCATCTCCCCTCATTCTAATCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCGGCGTTACGGCTCGAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGCTGAGATGGTTACTAAAGACTCGTGGAATAAAATGATTCTAGAGAGCGAAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGCAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACAACGATTTGCAAATAGCTGAAGACTATGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGCGATAGCGTGATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTCCTCAAGCAGTAGGATACATGACCAACCAAATCGGATATCTTTGGTAAGGTTGACCAGTTTGATTGTGTGAGTTGGTTGGCTATTTTGTTGCTAAAGCTTTCCACTGGGTTACTAGTTCTTGAGCTGTATATAATAAATATAGCTTTAATCCCAAGTTTCTTACTGTAGTTGAATGGATTGTATAGCCCTCATTGTTGTGCTGTCAAATTGTGATAAAACATTGCTGCATTGCAATCCACACGTCACTGTAATGGCTTTTTGGTGAAGATTACTTAGGAGTCGAACCATTTTCTTTGAAAAAAAATGCATCCTTTTCTTACTATTATTGTTTGTTTTAGTACAACAAGGGGTATGAGGGTTTAAACCTCCAAGTGAAAAGCTACATGTCAATTACTGTATTTTTTGTTAATTATGTCATGC

Coding sequence (CDS)

ATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCATCTCCCCTCATTCTAATCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCGGCGTTACGGCTCGAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGCTGAGATGGTTACTAAAGACTCGTGGAATAAAATGATTCTAGAGAGCGAAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGCAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACAACGATTTGCAAATAGCTGAAGACTATGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGCGATAGCGTGATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTCCTCAAGCAGTAG

Protein sequence

MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKAEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ

Homology

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BLAST of CcUC02G023540 vs. NCBI nr
Match: XP_038887358.1 (thioredoxin M3, chloroplastic [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPS+LRLNR +  RN SLTLN+QCISQPKA
Sbjct: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSSLRLNRRLKPRNASLTLNVQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES T VLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTD D+
Sbjct: 61  EVVTKDSWNKMILESGTTVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDM 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 165

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BLAST of CcUC02G023540 vs. NCBI nr
Match: XP_008454954.1 (PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxin M3 [Cucumis melo var. makuwa] >TYK06754.1 thioredoxin M3 [Cucumis melo var. makuwa])

HSP 1 Score: 307.8 bits (787), Expect = 5.8e-80
Identity = 150/165 (90.91%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAAS SFSTPQT P+RISP+SNLNSLRLFSPPSNLR+NR    RN SLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

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BLAST of CcUC02G023540 vs. NCBI nr
Match: XP_004136977.1 (thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein Csa_017328 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAASFSFST QT P+RISP+SNLNSLRLFSPPSNL  NR +  RN SLTLNIQCISQPKA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. NCBI nr
Match: KAG6588665.1 (Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022451.1 Thioredoxin M3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 143/165 (86.67%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MA+S  FS PQTLPNRIS HSNLNSL  FSPPSNLRL+R + ARN SLTLN+QC+SQ KA
Sbjct: 1   MASSLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. NCBI nr
Match: XP_023531830.1 (thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 143/165 (86.67%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MA+S  FS PQTLPN IS HSNLNSL  FSPPSNLRL+R + ARN SLTLN+QC+SQPKA
Sbjct: 1   MASSLPFSVPQTLPNCISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

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BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot
Match: Q9SEU7 (Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 7.0e-44
Identity = 97/172 (56.40%), Postives = 122/172 (70.93%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------ISPHSNLNSLRLFSPPSNLRLN--RGVTARNTS-LTLN 60
           MA S S S+    P R      IS  S L  +  FSP S LR +  R + + + S L L+
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLS 60

Query: 61  IQCISQPKAEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKC 120
             C+   +A  VT+ SW   +L+SETPVLVEFY SWCGPCRMVHR+IDE+A +Y GKL C
Sbjct: 61  PLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 120

Query: 121 FVLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
           ++LN DNDL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+AIERVL
Sbjct: 121 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

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BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot
Match: Q7XQQ2 (Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0430800 PE=2 SV=4)

HSP 1 Score: 138.7 bits (348), Expect = 6.1e-32
Identity = 57/111 (51.35%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 52  IQCISQPK-AEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLK 111
           + C   P+ A+ +T  SWN+ ++ S+ PVL+EF+ASWCGPCRMVHR++DE+A EY G++K
Sbjct: 58  VSCAYSPRGAKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIK 117

Query: 112 CFVLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIER 162
           C+ L+TD+  Q+A  Y I+ +P V+LFK+GEK  S+ GT+PK  Y+ AIE+
Sbjct: 118 CYKLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRAIEK 168

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BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.3e-29
Identity = 52/101 (51.49%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 63  VTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDLQI 122
           VTK +W  +++ESE PVLVEF+ASWCGPC+M+  VI +L+ EYEGKL C+ LNTD +  I
Sbjct: 71  VTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDI 130

Query: 123 AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
           A  + I+++P +M+FKNGEK D+VIG +P+   +++I++ +
Sbjct: 131 ATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 67/167 (40.12%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 3   ASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQ----CISQP 62
           AS S S       R  P S     +     S    NR    R  S+   +Q     I  P
Sbjct: 17  ASASASASSARRLRAVPPSRGIRYQALRADSGFAGNRRGGGRGASVVCAVQGQDTSIQVP 76

Query: 63  KAEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDN 122
           +   VTK +W  +++ESE PVLV ++A+WCGPC+M+  V+ +L+ EYEGKLKC+ LNTD 
Sbjct: 77  E---VTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDE 136

Query: 123 DLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           +  IA  Y ++++P +M+FKNGEK D+VIG +P+   IA+IE+ +++
Sbjct: 137 NPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFVER 180

[Close]

BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-28
Identity = 52/105 (49.52%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 59  KAEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDN 118
           + ++V   SW+++++ SETPVLV+F+A WCGPCRM+  +IDELA EY GK+KC+ LNTD 
Sbjct: 68  EVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDE 127

Query: 119 DLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
               A  Y I+++P V+ FKNGE+ DSVIG +PK      +E+ +
Sbjct: 128 SPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL
Match: A0A5D3C652 (Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 150/165 (90.91%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAAS SFSTPQT P+RISP+SNLNSLRLFSPPSNLR+NR    RN SLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL
Match: A0A1S3C0H5 (thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 150/165 (90.91%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAAS SFSTPQT P+RISP+SNLNSLRLFSPPSNLR+NR    RN SLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL
Match: A0A0A0K2M6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.9e-79
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MAASFSFST QT P+RISP+SNLNSLRLFSPPSNL  NR +  RN SLTLNIQCISQPKA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL
Match: A0A6J1C167 (thioredoxin M3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007512 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.4e-76
Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 3   ASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKAEM 62
           ASFSFSTPQ LPNRISPH    SLRLFSPPSN RL+R + ARN SL LNIQC+SQPKAE+
Sbjct: 7   ASFSFSTPQPLPNRISPH----SLRLFSPPSNFRLHRALRARNASLPLNIQCVSQPKAEV 66

Query: 63  VTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDLQI 122
           VTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDE+AA+YEGKLKCFVLNTDNDL+I
Sbjct: 67  VTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAADYEGKLKCFVLNTDNDLKI 126

Query: 123 AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           AE+YEIKAVPVVMLF+NGEKCDSVIGTMPKDFYIAAIERVLKQ
Sbjct: 127 AEEYEIKAVPVVMLFENGEKCDSVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL
Match: A0A6J1EMB5 (thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 142/165 (86.06%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA 60
           MA+   FS PQTLPNRIS HSNLNSL  FSPPSNLRL+R + ARN SLTLN+QC+SQ KA
Sbjct: 23  MASYLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 82

Query: 61  EMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDL 120
           E+VTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 83  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 142

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAAIERVLKQ
Sbjct: 143 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 187

[Close]

BLAST of CcUC02G023540 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.0e-45
Identity = 97/172 (56.40%), Postives = 122/172 (70.93%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------ISPHSNLNSLRLFSPPSNLRLN--RGVTARNTS-LTLN 60
           MA S S S+    P R      IS  S L  +  FSP S LR +  R + + + S L L+
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLS 60

Query: 61  IQCISQPKAEMVTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKC 120
             C+   +A  VT+ SW   +L+SETPVLVEFY SWCGPCRMVHR+IDE+A +Y GKL C
Sbjct: 61  PLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 120

Query: 121 FVLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
           ++LN DNDL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+AIERVL
Sbjct: 121 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of CcUC02G023540 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 9.3e-44
Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------ISPHSNLNSLRLFSPPSNLRLN--RGVTARNTS-LTLN 60
           MA S S S+    P R      IS  S L  +  FSP S LR +  R + + + S L L+
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLS 60

Query: 61  IQCISQPKAEM-VTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLK 120
             C+   +A   VT+ SW   +L+SETPVLVEFY SWCGPCRMVHR+IDE+A +Y GKL 
Sbjct: 61  PLCVRDSRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLN 120

Query: 121 CFVLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
           C++LN DNDL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+AIERVL
Sbjct: 121 CYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of CcUC02G023540 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 2   AASFSFSTPQTLPNRISPHSNL------NSLRLFSPPSNLRLNRGV-TARNTSLTLNIQC 61
           + S S + P     RISP   L      +S  L +  ++L  NR    AR   +    Q 
Sbjct: 21  SVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQD 80

Query: 62  ISQPKAEM--VTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCF 121
            +    E+  ++   W   +LES+ PVLVEF+A WCGPCRM+H ++D+LA ++ GK K +
Sbjct: 81  TTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFY 140

Query: 122 VLNTDNDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
            +NTD     A  Y I++VP V++FK GEK DS+IG +P++     IER L
Sbjct: 141 KINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CcUC02G023540 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-23
Identity = 50/154 (32.47%), Postives = 86/154 (55.84%), Query Frame = 0


Query: 10  PQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKAEMVTKDSWN 69
           P++   RI    +  SL     P   RL R V       T +IQ        +V   +W+
Sbjct: 40  PESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQ--------VVNDSTWD 99

Query: 70  KMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDLQIAEDYEIK 129
            ++L++  PV+V+F+A WCGPC+M+  ++++LA  Y GK+K + LNTD        Y ++
Sbjct: 100 SLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVR 159

Query: 130 AVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
           ++P +M+F  GEK D++IG +PK    +++++ L
Sbjct: 160 SIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of CcUC02G023540 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 56/161 (34.78%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 6   SFSTPQTLPNRISPHSNLNSLRLFSPPSNLRLNRGVTARNTSLTLNIQCISQPKA---EM 65
           SFST Q     + P S  + LR     S+L  N    +R + L   + C +Q  A    +
Sbjct: 27  SFSTRQMF--SVLPES--SGLRTRVSLSSLSKN----SRVSRLRRGVICEAQDTATGIPV 86

Query: 66  VTKDSWNKMILESETPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDNDLQI 125
           V   +W+ ++L+++ PV V+F+A WCGPC+M+  +++ELA +Y G+ K + LNTD     
Sbjct: 87  VNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPAT 146

Query: 126 AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVL 164
              Y ++++P +M+F NGEK D++IG + KD    +I + L
Sbjct: 147 PGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

The following BLAST results are available for this feature:

BLAST of CcUC02G023540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887358.1	1.4e-81	92.73	thioredoxin M3, chloroplastic [Benincasa hispida]	[more]
XP_008454954.1	5.8e-80	90.91	PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxi...	[more]
XP_004136977.1	1.4e-78	89.70	thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein...	[more]
KAG6588665.1	5.1e-76	86.67	Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023531830.1	5.1e-76	86.67	thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G023540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU7	7.0e-44	56.40	Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2	[more]
Q7XQQ2	6.1e-32	51.35	Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q6H7E4	8.3e-29	51.49	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
Q7X8R5	1.4e-28	40.12	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
P48384	7.0e-28	49.52	Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of CcUC02G023540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C652	2.8e-80	90.91	Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 ...	[more]
A0A1S3C0H5	2.8e-80	90.91	thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1	[more]
A0A0A0K2M6	6.9e-79	89.70	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610...	[more]
A0A6J1C167	9.4e-76	87.73	thioredoxin M3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007512 PE=...	[more]
A0A6J1EMB5	1.2e-75	86.06	thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657...	[more]

BLAST of CcUC02G023540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15570.1	5.0e-45	56.40	Thioredoxin superfamily protein	[more]
AT2G15570.2	9.3e-44	56.07	Thioredoxin superfamily protein	[more]
AT3G15360.1	1.0e-26	38.01	thioredoxin M-type 4	[more]
AT4G03520.1	9.1e-23	32.47	Thioredoxin superfamily protein	[more]
AT1G03680.1	1.5e-22	34.78	thioredoxin M-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 127..138 score: 27.78 coord: 79..87 score: 61.79 coord: 87..96 score: 49.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 61..165 e-value: 3.4E-29 score: 103.0
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 33..165
None	No IPR available	PANTHER	PTHR45663:SF21	THIOREDOXIN M3, CHLOROPLASTIC	coord: 33..165
None	No IPR available	CDD	cd02947	TRX_family	coord: 72..160 e-value: 2.5487E-30 score: 103.792
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 64..161 e-value: 1.6E-29 score: 100.1
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 61..159 e-value: 1.4E-24 score: 86.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 37..165 score: 12.296652
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 80..98
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 52..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G023540.1	CcUC02G023540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity