
CcUC02G022620 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTGTGTGGGCCTGTGTTGGGCTTTGCTCGAATATCCAAAACGAAGCCCAAGCCCAAAACGTATCGTTTCATCGACTGGAAATCGGTAACTGTTTCAGGGAATCCAGCGATCACAAGCTCAGTAGTTCCTGCAAAGAGAAGCATTTGGGAATCCCACCCTTTGAGTAGCGGTGAAAAGCATCGGCTTACAACACAGCCACAATTTGTCATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCCGTGCTCGTCAGCTTGTAAGCAATCTTCTCCTCTTTGCCCTAATTTTTCTACTCTTCCCCTCACACCCTTTTTCCGGCGATGTACTTATAAGACCCAGTTGCTTCAATATGGATGATTCTGAGCTTTTCTTCCGTTTTGGGATTTCTATCGTTTGTAATTGAATCGAGGTTTTCTGGGTGGCGATCACTTCTTTTTAGTTTTGATACTTCGAGTCGTAGAACAGATGGGGTATTCGTTTTTTTTTTTGGTTTTTTAATCGAATCATACAATTATGGTCATTGGGAATTGTTGTGTGTAATTTATCTGTTCCGTTGGGTCAACATTTTTTGATATGGAAATGGGATTGTGTGTCCTTTCTTTTCCCTAACTTGGAAGGATTTGTTATTTTTAATTGTCCCATTTGGAGGGAGATTATGTTTAGGACGAGGAACTTGAAGTACTGAATACTTGCAGACTAGGCAGTTGATGGTTAGGCTGTTCATACAATGCAATATCCTGAACTTTTCTGGTAAAAATGTAGGCTATTATCTAGATATGTCGCAAAGAACTGTAGATGGTTTCCGAAATTTTGGGGGAGATGTTCAAGACTGAATTACCCCTTGTATGTTCTTTCCATGTGGCGCCATAGTAAGCTCAATTCAACGATAATTGGGATGGGATGGATTCCATCCTTGAGCTTGTAGGTTTGAATTCCCATCCCATAGTTGTCTGTACCCAAAAAAAAAAAAAAAGGAAAAAAGAAAAAAAAGAAATTCATGTGCTCACGGTTTGGGGGAAAAAGGATTTAGCACTATGGTGTTGTGCGGCTTATTTTTTCTGAATAACCAATTACTTAGTCTGTAATCTTTTATTATTTATCTGTTTTGACGTTGGGGAGGGTTCTGTTCAATGTTCACCTTTGAAGGCCTTTTACTGTTATATTCTTTGATACGAGTATTTCACTTTGGTACTTGATGAAAAATATCGTCTCCTAAGCTTTAGTTATCATGGAGGTATTTACAATATTGATTGAAAACTTGATGGGAATCATGCCACAAAAATTGTATTCCTCAATTCTGATACTTCATTTATCATGTGTATAATCTACTGTTGTTAGGCCGTCTCTGGACAAGCACTGCGAGGTTCTCCTTTCCATGGTCTCCGGTCAAGTGCACACTTGTACAGTACCAAAAATGGTTTTGTTTCTGGTTCTCATCATCTTGATAAATTTACTTGTATTATCATATTGGCATAATTAATCACTGCTGAAGCTGAACTTTGCAGTGTGTATATGGTCCACAGGACATATACTTATTCGTTTTATTTCTGCCAGAATGGTGCTATGGATTTTTTTCCTTTGCTTAAAATTCTTTTCCTTCTCGTTAATTCTGCAGAAGATGAAGAAAGAGAGCAGCTTGCCAAGGAGATCTCGAAGGATTGGAGTTCTAGTAATTTTTTATTTCCTTCCATAGTTTCTTCACTGTTTTCTTTTAAATCTTTTTCAGTTGTTTGTTCTATTATATTTCTTGGTTCTTATATAATCAATTTCATGGCTATTTTTAGTTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAAATGGTTCGGGGTCTGAGTCTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTGTAAGTATCATCCAATCAACCTTCTTTGGCACTAAGCTAAAATTCTTGTTGATCCCGATTTCTGAGTATTGTACATGTATCATGCAGATCAATTATCCATTCGAGAAAGGCCCCCTAAGTCCTCGTTTCCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTGTAAGAGTCTGAATCTATATTTTAAACTTTTTGTTTAAGTCATCTTGGTTTGGACATGTAGTTCTACAACGTCACGTTATTGAAGTTTGTATATTTCTTGCTATCTTTGATTTTAAGTTAAATTACCAGTTTAGTCCCTGAATTTTCAGGTTTGTGTCTATTGGGTCTTTGAACTTCTTTCAATTTGCCTTTGGACTTTAAAAAGTGTCTGATAGATTCTTAAAATTTCAATTTGATATCCTTCAAGTTCATGATCTTTAAAAAGTATCTAATGGATTCAACTTTCAATTTTGTGTCCAATATATTACTTTATTTTTCAATTTTGTATCTAATAGGTCTTGGACCTATTCGATATATATATATATATATATGTTTTTTTTTTAATTTCACATATCTACTTAACATAAAATTGAAATCTTAAGATTCCATTGAACATATAATTCAACTTTATATCTAATTGATCAATTATCAATAATTTTTATTTTATTTATTTTTATTTATTTATTATTATTTTTTTTTTATGAAAGACCTATGAGATACAAAATTGAAAGTTAAGAGACCTATTAGAACACTATAGCTTGGACGATATTTTACTGTCCCTTAATGCATTGAAGCACATATTGAAATGTTTTGTCGAAGTTGATAAATCTTAATAGGATAGCATGTATCGAAGGTCAAGCATGACTTTAATCCTTGACTGAAGAGTGTATTTGAGAGGGGTTCTCTAAGAGATGCAACTTTGAGAGCTATTTGTGCTCATATTTCTCATCAGCGGTTCTGCATCTGCATAATAGTTTTGCTCTGTAGTCTTGTAACATGGTGGATAATAACATATTCACATTTAAATTTTGTGCAGAACTTTGATAATGTTACATAAATCATCATATTTTAGTAGGCCATGCTTAAAATGTTTATGGTTTTGATCACGAGATAAATTAGATACTTCGAAATGATACATATGAGCATAAGCTTATCTGATCATTACCTTGAGTTGTGGCTTGAACTTATGTCTGTATTCTATTTTGATTTTCTTGTTAGATTTGTCCTGCTCAAGCAATCACAATCGAAGCTGAGGAACGGGAAGATGGTAGCCGGAGGACCACGAGGTGATCACACCTCCAAACCATCTCTTTTTCGTTATGTCTGTGTCCCTAAAGAATCTTAATTTTCAGGTATGACATTGACATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCAATTGTTGAAGGTCCCAACTTTGAGTTTGCAACAGAGACTCACGAGGTTGATCTTATTAATGTTTTGAATGTTATGATAAGCTTCATAACTTGCTGAAGAATGTTAGCCTCATAGTTTTGTGATGATGTAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGCTGGGAGACCGAGATTGCAGAAAACCTCAGATCTGAAAGCCTCTATCGCTGATACATTTGCCCATGGTGTACTCTGGATTTGACTTTTCTTAGTGCGTTCATAATAAGATAAATCTGAGCATCTGTTGAAAATTATTTTGTATTCTTGGTATACATGAGTTGAGAACATAATTCTTGCTGCTTACTACGGCCCAAGTTTGGGATTTTTTTCAGTATCTTTTGTTTTTCTTCCCAATAAAAATGGGAATGTTATGGTTTCTCATGAAGTTGTAATGTAGGTAAAATATGAACATTATCATCAATATATCTTCAATGTTCTTCACGACTTCATTCTCTG ATGGGCCTGTGTGGGCCTGTGTTGGGCTTTGCTCGAATATCCAAAACGAAGCCCAAGCCCAAAACGTATCGTTTCATCGACTGGAAATCGGTAACTGTTTCAGGGAATCCAGCGATCACAAGCTCAGTAGTTCCTGCAAAGAGAAGCATTTGGGAATCCCACCCTTTGAGTAGCGGTGAAAAGCATCGGCTTACAACACAGCCACAATTTGTCATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCCGTGCTCGTCAGCTTGCCGTCTCTGGACAAGCACTGCGAGGTTCTCCTTTCCATGGTCTCCGGTCAAGTGCACACTTGTACAGTACCAAAAATGGTTTTGTTTCTGTTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAAATGGTTCGGGGTCTGAGTCTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTATCAATTATCCATTCGAGAAAGGCCCCCTAAGTCCTCGTTTCCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTATTTGTCCTGCTCAAGCAATCACAATCGAAGCTGAGGAACGGGAAGATGGTAGCCGGAGGACCACGAGGTATGACATTGACATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCAATTGTTGAAGGTCCCAACTTTGAGTTTGCAACAGAGACTCACGAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGCTGGGAGACCGAGATTGCAGAAAACCTCAGATCTGAAAGCCTCTATCGCTGATACATTTGCCCATGGTGTACTCTGGATTTGACTTTTCTTAGTGCGTTCATAATAAGATAAATCTGAGCATCTGTTGAAAATTATTTTGTATTCTTGGTATACATGAGTTGAGAACATAATTCTTGCTGCTTACTACGGCCCAAGTTTGGGATTTTTTTCAGTATCTTTTGTTTTTCTTCCCAATAAAAATGGGAATGTTATGGTTTCTCATGAAGTTGTAATGTAGGTAAAATATGAACATTATCATCAATATATCTTCAATGTTCTTCACGACTTCATTCTCTG ATGGGCCTGTGTGGGCCTGTGTTGGGCTTTGCTCGAATATCCAAAACGAAGCCCAAGCCCAAAACGTATCGTTTCATCGACTGGAAATCGGTAACTGTTTCAGGGAATCCAGCGATCACAAGCTCAGTAGTTCCTGCAAAGAGAAGCATTTGGGAATCCCACCCTTTGAGTAGCGGTGAAAAGCATCGGCTTACAACACAGCCACAATTTGTCATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCCGTGCTCGTCAGCTTGCCGTCTCTGGACAAGCACTGCGAGGTTCTCCTTTCCATGGTCTCCGGTCAAGTGCACACTTGTACAGTACCAAAAATGGTTTTGTTTCTGTTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAAATGGTTCGGGGTCTGAGTCTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTATCAATTATCCATTCGAGAAAGGCCCCCTAAGTCCTCGTTTCCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTATTTGTCCTGCTCAAGCAATCACAATCGAAGCTGAGGAACGGGAAGATGGTAGCCGGAGGACCACGAGGTATGACATTGACATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCAATTGTTGAAGGTCCCAACTTTGAGTTTGCAACAGAGACTCACGAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGCTGGGAGACCGAGATTGCAGAAAACCTCAGATCTGAAAGCCTCTATCGCTGA MGLCGPVLGFARISKTKPKPKTYRFIDWKSVTVSGNPAITSSVVPAKRSIWESHPLSSGEKHRLTTQPQFVMAAILARKSLLRARQLAVSGQALRGSPFHGLRSSAHLYSTKNGFVSVFERSINTLFLTEMVRGLSLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR Homology
BLAST of CcUC02G022620 vs. NCBI nr
Match: XP_038887775.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Benincasa hispida]) HSP 1 Score: 389.4 bits (999), Expect = 2.5e-104 Identity = 199/222 (89.64%), Postives = 202/222 (90.99%), Query Frame = 0
BLAST of CcUC02G022620 vs. NCBI nr
Match: XP_022933976.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita moschata] >XP_022971419.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita maxima] >XP_023529277.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita pepo subsp. pepo] >KAG6588437.1 hypothetical protein SDJN03_17002, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022285.1 hypothetical protein SDJN02_16016 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102 Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of CcUC02G022620 vs. NCBI nr
Match: KAG7011706.1 (hypothetical protein SDJN02_26612 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102 Identity = 197/226 (87.17%), Postives = 200/226 (88.50%), Query Frame = 0
BLAST of CcUC02G022620 vs. NCBI nr
Match: XP_022136046.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Momordica charantia]) HSP 1 Score: 382.9 bits (982), Expect = 2.4e-102 Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of CcUC02G022620 vs. NCBI nr
Match: XP_004150417.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Cucumis sativus] >KGN44354.1 hypothetical protein Csa_016014 [Cucumis sativus]) HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101 Identity = 196/222 (88.29%), Postives = 201/222 (90.54%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy Swiss-Prot
Match: Q42599 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g79010 PE=1 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.7e-95 Identity = 180/222 (81.08%), Postives = 190/222 (85.59%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy Swiss-Prot
Match: Q9FX83 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g16700 PE=1 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.7e-95 Identity = 179/222 (80.63%), Postives = 190/222 (85.59%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy Swiss-Prot
Match: P80269 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94 Identity = 183/229 (79.91%), Postives = 191/229 (83.41%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy Swiss-Prot
Match: O24143 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.7e-91 Identity = 176/230 (76.52%), Postives = 186/230 (80.87%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy Swiss-Prot
Match: O21233 (NADH-ubiquinone oxidoreductase subunit 8 OS=Reclinomonas americana OX=48483 GN=NAD8 PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.3e-79 Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy TrEMBL
Match: A0A6J1I8H7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111470147 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 5.2e-103 Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy TrEMBL
Match: A0A6J1F0I7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441225 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 5.2e-103 Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy TrEMBL
Match: A0A6J1C2E8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007833 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.2e-102 Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy TrEMBL
Match: A0A0A0K5Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268510 PE=3 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 5.7e-102 Identity = 196/222 (88.29%), Postives = 201/222 (90.54%), Query Frame = 0
BLAST of CcUC02G022620 vs. ExPASy TrEMBL
Match: A0A6J1GJX8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455001 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 9.8e-102 Identity = 195/222 (87.84%), Postives = 199/222 (89.64%), Query Frame = 0
BLAST of CcUC02G022620 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin ) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96 Identity = 179/222 (80.63%), Postives = 190/222 (85.59%), Query Frame = 0
BLAST of CcUC02G022620 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin ) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96 Identity = 180/222 (81.08%), Postives = 190/222 (85.59%), Query Frame = 0
BLAST of CcUC02G022620 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 42/121 (34.71%), Postives = 62/121 (51.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|