Homology
BLAST of CcUC02G022420 vs. NCBI nr
Match:
XP_038888249.1 (RNA-binding protein 28 [Benincasa hispida])
HSP 1 Score: 1638.6 bits (4242), Expect = 0.0e+00
Identity = 874/970 (90.10%), Postives = 916/970 (94.43%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRLKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRGFGFVQFAVAEDANRAIELKN + VEGRKITVKHAMHRAPLEQRRSKENQ TAS S
Sbjct: 61 TEHRGFGFVQFAVAEDANRAIELKNELFVEGRKITVKHAMHRAPLEQRRSKENQVTASMS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTSNSEGKERHLNARELA 180
T NEEGDT KREEQ DTSKREEQTTN+DRDTS++AEQTTSNSEGKERHLNAR+LA
Sbjct: 121 TTNEEGDTPKREEQ------DTSKREEQTTNKDRDTSKRAEQTTSNSEGKERHLNARKLA 180
Query: 181 SLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQ 240
SLSSYLEDKEGHS KQRIARTVVFGGLLNADMAEDVH QARDVG +CSIVYPLP+KEVEQ
Sbjct: 181 SLSSYLEDKEGHSEKQRIARTVVFGGLLNADMAEDVHRQARDVGGVCSIVYPLPKKEVEQ 240
Query: 241 HGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR 300
HGLLRDGCKMDVSAVLFASVKSARAAVTILHQKE KGGVVWARQLGGEGSKTQKWKVIVR
Sbjct: 241 HGLLRDGCKMDVSAVLFASVKSARAAVTILHQKERKGGVVWARQLGGEGSKTQKWKVIVR 300
Query: 301 NLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQK 360
NLPFKAKE+EIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIK FNG+K
Sbjct: 301 NLPFKAKEQEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKTFNGKK 360
Query: 361 FGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDDFKAENTAVHEKSQCS 420
FGQRTIAVDWAVPKKIYSSGA+A VDSDDGEQTERDREGSISSDDF+AE+ AVH+KS S
Sbjct: 361 FGQRTIAVDWAVPKKIYSSGANAAVDSDDGEQTERDREGSISSDDFEAEDIAVHDKSPHS 420
Query: 421 NKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPSKVNKEP 480
NKDE SEDSE+EDISSEV+FEGEAE+ARKVLENLISSSAKEALPS +DG PPSKVNKEP
Sbjct: 421 NKDERFSEDSEEEDISSEVDFEGEAEIARKVLENLISSSAKEALPSRVDGKPPSKVNKEP 480
Query: 481 DFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQRF 540
DF SSKKSSD+SDKVSNE KL+ESKTS+LKQTDEDDLKRTVYIGNLPFDIDNEEVKQRF
Sbjct: 481 DFVSSKKSSDMSDKVSNESEKLSESKTSMLKQTDEDDLKRTVYIGNLPFDIDNEEVKQRF 540
Query: 541 SGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGVGIFLRGKPLKVLN 600
SGFGEVLSFVPVLHQVTKRPKGTGFLKFKTV+AATAAVSSANVASGVGIFL+G+ LKV N
Sbjct: 541 SGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVDAATAAVSSANVASGVGIFLKGRQLKVFN 600
Query: 601 ALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTT 660
ALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTT
Sbjct: 601 ALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTT 660
Query: 661 KLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKKGK 720
KLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKKGK
Sbjct: 661 KLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKKGK 720
Query: 721 LLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKL 780
+LTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGP NRPIVEFAIDN+QTLKLRKAKL
Sbjct: 721 ILTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPKNRPIVEFAIDNIQTLKLRKAKL 780
Query: 781 QAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVR----NKDENDNH 840
QAWSQDNTANVPKA Q NVNTDT AGD+HSN+ NSRKRKA+GDNRPV+ NKD+NDNH
Sbjct: 781 QAWSQDNTANVPKAQQWNVNTDTNAGDIHSNQKNSRKRKAIGDNRPVKAQNHNKDDNDNH 840
Query: 841 VSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSNGSVSMDSGKIKASQE 900
VSNDV M E+RA KKRKT PEIGNTN+ L+QKP G++ MPEKSS SMD GKIKASQE
Sbjct: 841 VSNDV-MVESRARKKRKTRPEIGNTNESLKQKP-GQKLMPEKSSKRPASMDPGKIKASQE 900
Query: 901 ADVQHKKKVKHQVEQQRKRPKKNKEPIGRDVVDKLDVLIEQYRSKFLQQRSDRTDGEKKG 960
+DVQH KKVKH+V+QQRKRPKKNKEPIGRDVVDKLDVLIEQY+SKF QQRSDRTDGEKKG
Sbjct: 901 SDVQHIKKVKHEVKQQRKRPKKNKEPIGRDVVDKLDVLIEQYQSKFSQQRSDRTDGEKKG 960
Query: 961 SKQVRRWFQS 967
SKQVRRWFQS
Sbjct: 961 SKQVRRWFQS 962
BLAST of CcUC02G022420 vs. NCBI nr
Match:
XP_008448076.1 (PREDICTED: RNA-binding protein 28 [Cucumis melo])
HSP 1 Score: 1555.4 bits (4026), Expect = 0.0e+00
Identity = 835/974 (85.73%), Postives = 892/974 (91.58%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKN++ +DG +KGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNRRLKDGADKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRGFGFVQFAVAEDANRAI+LKNG+S EGRKITVKHAMHRAPLEQRRSKENQ AS
Sbjct: 61 TEHRGFGFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQVAASTL 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTSNSEGKERHLNARELA 180
N EGDTS+ EEQ N+DR TSKR+EQ +++RDTS++AEQT SNSEGKERHL+AR+LA
Sbjct: 121 EANVEGDTSEMEEQPTNKDRGTSKRDEQPIDKERDTSKRAEQTISNSEGKERHLSARKLA 180
Query: 181 SLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQ 240
SLSSYLEDK+GHSGKQRIARTVV GGLL+ DMAEDVH Q +D G +CSIVYPLPRKEVEQ
Sbjct: 181 SLSSYLEDKKGHSGKQRIARTVVIGGLLDGDMAEDVHRQVKDAGGVCSIVYPLPRKEVEQ 240
Query: 241 HGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR 300
HG+LRDGCKMDVSAVLF SVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR
Sbjct: 241 HGILRDGCKMDVSAVLFDSVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR 300
Query: 301 NLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQK 360
NLPFKAKEKEIK+TFSSAGFVWDVMMP +SDTGLSKGFAF+KFTCKQDAESAI+KFNG+K
Sbjct: 301 NLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFIKFTCKQDAESAIQKFNGKK 360
Query: 361 FGQRTIAVDWAVPKKIYSS--GASAPVDSDDGEQTERDREGSISSDDFKAENTAVHEKSQ 420
FGQRTIAVDWAVPKKIYSS GA+APVDSDD +QTERDRE SIS DF+ ENTA H +S
Sbjct: 361 FGQRTIAVDWAVPKKIYSSGGGANAPVDSDDEDQTERDRESSISGGDFEDENTAGHHES- 420
Query: 421 CSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPSKVNK 480
ESS EDSEKEDISSEV+FEGEAE+ARKVLE LISSSAKEALPS IDGNP SKVNK
Sbjct: 421 -----ESSLEDSEKEDISSEVDFEGEAEIARKVLETLISSSAKEALPSLIDGNPASKVNK 480
Query: 481 EPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ 540
+PDFDSSKKSSD+SDKVSNE GKL+ESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ
Sbjct: 481 DPDFDSSKKSSDMSDKVSNEHGKLSESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ 540
Query: 541 RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGVGIFLRGKPLKV 600
RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKT +AA AAVSSAN ASGVGIFL+G+ LKV
Sbjct: 541 RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTTDAANAAVSSANAASGVGIFLKGRQLKV 600
Query: 601 LNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKR 660
LNALD+KSAHDKELEKSKNDNHDHRNLYLAQEG+ILEGTPAAEGVSASDMEKRQRLEKKR
Sbjct: 601 LNALDKKSAHDKELEKSKNDNHDHRNLYLAQEGLILEGTPAAEGVSASDMEKRQRLEKKR 660
Query: 661 TTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKK 720
TTKLQSPNFHVSRTRLVIHNLPKSMKEKEL KLCIEAVTSRATKQKPVIRQIKFLKDVKK
Sbjct: 661 TTKLQSPNFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQKPVIRQIKFLKDVKK 720
Query: 721 GKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA 780
GK+LTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA
Sbjct: 721 GKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA 780
Query: 781 KLQAWSQDN-TANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVRN----KDEN 840
KLQAWSQDN TANVPKA RN +DT A DVHSNKNNSRKRKA+ DN V+ +DEN
Sbjct: 781 KLQAWSQDNSTANVPKARLRNDGSDTKARDVHSNKNNSRKRKAIDDNHLVKAQNHIEDEN 840
Query: 841 DNHVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSNGSVSMDSGKIKA 900
DNHVSNDV M+E+RA KKRKT P+IGNTN+ +QKPEGRR +P+KSS SMDS KI+
Sbjct: 841 DNHVSNDV-MQESRARKKRKTRPDIGNTNESQKQKPEGRRLIPQKSSKRPASMDSEKIEV 900
Query: 901 SQEADVQHKKKVKHQVE-QQRKRPKKNKEPIGRDVVDKLDVLIEQYRSKFLQQRSDRTDG 960
SQEAD Q KKKVKHQ+E QQRKRP KNKEPIGRD+VDKLDVLIEQY+SKFLQQRSDRTD
Sbjct: 901 SQEADAQQKKKVKHQIEQQQRKRPMKNKEPIGRDIVDKLDVLIEQYQSKFLQQRSDRTDS 960
Query: 961 EKKGSKQVRRWFQS 967
EKKGSKQVRRWFQS
Sbjct: 961 EKKGSKQVRRWFQS 967
BLAST of CcUC02G022420 vs. NCBI nr
Match:
XP_022975201.1 (RNA-binding protein 28 isoform X2 [Cucurbita maxima])
HSP 1 Score: 1551.6 bits (4016), Expect = 0.0e+00
Identity = 833/986 (84.48%), Postives = 896/986 (90.87%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQTTNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QA++VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNGQKFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KDE SSEDSEKEDISSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPSKVNKEP DSSKKSSD+SDKVSN P KL+E KTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPKA R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSN 900
PV+ K+ N+N HVSND+AMEE+RA KKRKT PE GN N+ +QKPEGRRSMPEK S
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSK 900
Query: 901 GSVSMDSGKIKASQEADVQHKKKVKHQVE-QQRKRPKKNKEPIGRDVVDKLDVLIEQYRS 960
S MD+ K KASQEADVQHKKK KHQVE QQRKR KKNK P+G+D VDKLD LIEQYRS
Sbjct: 901 RSAPMDTVKTKASQEADVQHKKKAKHQVEQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRS 960
Query: 961 KFLQQRSDRTDGEKKGSKQVRRWFQS 967
KF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 KFSQKSSDPADGEKKGSKQVRRWFQS 984
BLAST of CcUC02G022420 vs. NCBI nr
Match:
XP_022975200.1 (RNA-binding protein 28 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1551.2 bits (4015), Expect = 0.0e+00
Identity = 833/987 (84.40%), Postives = 896/987 (90.78%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQTTNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QA++VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNGQKFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KDE SSEDSEKEDISSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPSKVNKEP DSSKKSSD+SDKVSN P KL+E KTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPKA R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSN 900
PV+ K+ N+N HVSND+AMEE+RA KKRKT PE GN N+ +QKPEGRRSMPEK S
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSK 900
Query: 901 GSVSMDSGKIKASQEADVQHKKKVKHQVE--QQRKRPKKNKEPIGRDVVDKLDVLIEQYR 960
S MD+ K KASQEADVQHKKK KHQVE QQRKR KKNK P+G+D VDKLD LIEQYR
Sbjct: 901 RSAPMDTVKTKASQEADVQHKKKAKHQVEQQQQRKRAKKNKLPVGQDAVDKLDKLIEQYR 960
Query: 961 SKFLQQRSDRTDGEKKGSKQVRRWFQS 967
SKF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 SKFSQKSSDPADGEKKGSKQVRRWFQS 985
BLAST of CcUC02G022420 vs. NCBI nr
Match:
XP_022953093.1 (RNA-binding protein 28 [Cucurbita moschata])
HSP 1 Score: 1549.3 bits (4010), Expect = 0.0e+00
Identity = 833/987 (84.40%), Postives = 898/987 (90.98%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSF NS+LEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFANSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ TASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQ TNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QAR+VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNG+KFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGKKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KD SSSEDSEKED+SSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDGSSSEDSEKEDVSSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPS VNKEP FDSSKKSSD+SDKVSN P KL+ESKTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSNVNKEPVFDSSKKSSDMSDKVSNGPEKLSESKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPK+ R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIG-NTNKLLRQKPEGRRSMPEKSS 900
PV+ K+ N+N HVSND+AMEE+R KK+KT PE G NTN+ L+QKPEGRRSMPEKSS
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRDRKKKKTRPESGNNTNESLKQKPEGRRSMPEKSS 900
Query: 901 NGSVSMDSGKIKASQEADVQHKKKVKHQVEQ-QRKRPKKNKEPIGRDVVDKLDVLIEQYR 960
S MD+ K KASQEADVQHKKK KHQVEQ QRKR KKNK P+G+D VDKLD LIEQYR
Sbjct: 901 KRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYR 960
Query: 961 SKFLQQRSDRTDGEKKGSKQVRRWFQS 967
SKF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 SKFSQKSSDSADGEKKGSKQVRRWFQS 985
BLAST of CcUC02G022420 vs. ExPASy Swiss-Prot
Match:
Q8CGC6 (RNA-binding protein 28 OS=Mus musculus OX=10090 GN=Rbm28 PE=1 SV=4)
HSP 1 Score: 231.9 bits (590), Expect = 3.1e-59
Identity = 276/968 (28.51%), Postives = 417/968 (43.08%), Query Frame = 0
Query: 25 VFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDANRAIELK 84
+FV LP S + +LEE FS VGPV++CF+VT+KGS RGFG+V F++ ED RA LK
Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRA--LK 65
Query: 85 NGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKSTINEEGDTSKREEQTINEDRDTSK 144
+ EG KI V T +K + N+ ++T K
Sbjct: 66 EITTFEGCKIDV-------------------TVAKKKLR-------------NKSKETRK 125
Query: 145 REEQTTNEDRDTSEKAEQTTSNSEGKERHLNARELASLSSYLEDKEGHSGKQRIARTVVF 204
E N+E
Sbjct: 126 NE-------------------NAES----------------------------------- 185
Query: 205 GGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSAR 264
P+KE + K A+
Sbjct: 186 -----------------------------PKKEPKH--------------------KKAK 245
Query: 265 AAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDV 324
A +K ++I+RNL FK E ++K F+ G V +V
Sbjct: 246 VA-------------------------DKKARLIIRNLSFKCSEDDLKAVFTHYGTVLEV 305
Query: 325 MMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSG--AS 384
+P D G +GFAFV+F +A A+K N ++ RT+AVDWAV K Y AS
Sbjct: 306 NIPKKPD-GKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTVAVDWAVAKDKYKDAQHAS 365
Query: 385 APVDSDDGEQTERDREGSISSDDFKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFE 444
AP G S D K + + K C +++ D E++D S + E
Sbjct: 366 AP--------------GVKKSSDRKPKESG---KKNCRVEEQVEDSDDEEDDDSHDDEEE 425
Query: 445 GEAEMARKVLENLISSSAKEALPSSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKL 504
E+ +A V ++ + K A P + + D S + SD+ + S+
Sbjct: 426 RESTIASPV--SVHKRAVKRAAP-----------EESIEEDDSYEDSDLEEGGSSYDEGT 485
Query: 505 NESKTSILKQTDED-------------DLK--RTVYIGNLPFDIDNEEVKQRFSGFGEVL 564
+S++S Q DED D+ +TV+I NL FD + E + + FG++
Sbjct: 486 VDSESSAEDQEDEDVPVSEKKKRKLPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLK 545
Query: 565 SFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANV-ASGVGIFLRGKPLKVLNALDRKS 624
VLH T+ KG F +F T AA +++A++ A G G+ L G+ LKV A+ R
Sbjct: 546 YVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTRDE 605
Query: 625 AHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSPN 684
A + +K K RNLYLA+EG+I GT AAEGVSA+DM KR+R E + KL++ N
Sbjct: 606 AAKLQTKKVKKPT-GTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKNQN 665
Query: 685 FHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPV-IRQIKFLKDVKKGKLLTKN 744
VS+TRL +HNLPK++ +K+L+KL +EA +K V I++ + ++D+K K
Sbjct: 666 IFVSQTRLCLHNLPKAVDDKQLRKLLLEATRG----EKGVRIKECRVMRDLKGVHGKMKG 725
Query: 745 HSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAK----LQ 804
S G AF EF +HEHAL ALR NNNPE FG RPIVEF++++ + LK+++ + LQ
Sbjct: 726 QSLGYAFAEFQKHEHALRALRHFNNNPEIFGSQKRPIVEFSLEDRRKLKVKELRIQRSLQ 750
Query: 805 AWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVRNKDENDNHVSNDV 864
+ P+ Q+ V D V S + + KA G+ + S
Sbjct: 786 KMESKPVTSKPQKEQKEVGKDKQQKVVQSATQD--QSKAPGEQKGKAG--------STSW 750
Query: 865 AMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSNGSV-SMDSGKIKASQEADVQ 924
+ + +A ++ P+ G + + P R G V S+ S K K Q
Sbjct: 846 SGFQTKAEVEQVELPD-GKKRRKVLALPSHRGPKIRLRDKGKVKSLPSRKPKPQMGQRKQ 750
Query: 925 HKKKVKHQVEQQRKRPKKNKEPIGRDVVDKLDVLIEQYRSKFLQQRSDRTDGEKKGSKQV 967
K+++ V+ +++ K+NK + + L+EQY+ K L G KG+ +
Sbjct: 906 KKQQLASSVQAPKRKAKENKAEA------RFNQLVEQYKQKLL--------GPSKGAPLM 750
BLAST of CcUC02G022420 vs. ExPASy Swiss-Prot
Match:
Q9NW13 (RNA-binding protein 28 OS=Homo sapiens OX=9606 GN=RBM28 PE=1 SV=3)
HSP 1 Score: 227.6 bits (579), Expect = 5.9e-58
Identity = 271/979 (27.68%), Postives = 413/979 (42.19%), Query Frame = 0
Query: 25 VFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDANRAIELK 84
+FV LP S + +LEE FS VGPV++CF+VT+KGS RGFG+V F++ ED RA LK
Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRA--LK 65
Query: 85 NGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKSTINEEGDTSKREEQTINEDRDTSK 144
+ EG KI V T+ + + +K
Sbjct: 66 EITTFEGCKINV--------------------------------------TVAKKKLRNK 125
Query: 145 REEQTTNEDRDTSEKAEQTTSNSEGKERHLNARELASLSSYLEDKEGHSGKQRIARTVVF 204
+E+ NE NSE
Sbjct: 126 TKEKGKNE-------------NSE------------------------------------ 185
Query: 205 GGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSAR 264
P+KE K A+
Sbjct: 186 ----------------------------CPKKE--------------------PKAKKAK 245
Query: 265 AAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDV 324
A +K ++I+RNL FK E ++K F+ G V +V
Sbjct: 246 VA-------------------------DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEV 305
Query: 325 MMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAP 384
+P D G +GF FV+F +A A+K N ++ RT+AVDWAV K Y S
Sbjct: 306 NIPRKPD-GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDKYKDTQSV- 365
Query: 385 VDSDDGEQTERDREGSISSDDFKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGE 444
S GE+ S + K + + + + + +E ++D + +D + F+ E
Sbjct: 366 --SAIGEE---------KSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDDE 425
Query: 445 AEMARKVLENLISSSAKEALPSSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPG-KLN 504
E EN+ S K P I + D S++ SD+ + S + G +L
Sbjct: 426 DEEE----ENIESKVTK---PVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSIDDGEELA 485
Query: 505 ESKTSILKQTDE-------------DDLK--RTVYIGNLPFDIDNEEVKQRFSGFGEVLS 564
+S TS +Q D+ D+ +TV+I NL FD + EE+ + FGE+
Sbjct: 486 QSDTSTEEQEDKAVQVSNKKKRKLPSDVNEGKTVFIRNLSFDSEEEELGELLQQFGELKY 545
Query: 565 FVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGV-GIFLRGKPLKVLNALDRKSA 624
VLH T+ KG F +F T AA + +A+ + G+ L G+ LKV A+ R A
Sbjct: 546 VRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKVDLAVTRDEA 605
Query: 625 HDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSPNF 684
+ K K RNLYLA+EG+I GT AAEGVSA+DM KR+R E + KL+ N
Sbjct: 606 AKLQTTKVKKPT-GTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKDQNI 665
Query: 685 HVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPV-IRQIKFLKDVKKGKLLTKNH 744
VSRTRL +HNLPK++ +K+L+KL + A + +K V I++ + ++D+K K
Sbjct: 666 FVSRTRLCLHNLPKAVDDKQLRKLLLSATSG----EKGVRIKECRVMRDLKGVHGNMKGQ 725
Query: 745 SCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWSQD 804
S G AF EF EHEHAL ALR++NNNPE FGP+ RPIVEF++++ + LK+++ ++Q
Sbjct: 726 SLGYAFAEFQEHEHALKALRLINNNPEIFGPLKRPIVEFSLEDRRKLKMKELRIQ----- 759
Query: 805 NTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVRNKDENDNHVSNDVAMEEN 864
++ K + + G K+ +K ++ + V E+
Sbjct: 786 --RSLQKMRSKPATGEPQKGQPEPAKDQQQKAA------------QHHTEEQSKVPPEQK 759
Query: 865 RAIKKR-----KTHPEIGNTNKLLRQKPEGRR-----SMPEKSSNGSVSMDSGKIKASQE 924
R +T E+ + P+G++ ++P D GK+K
Sbjct: 846 RKAGSTSWTGFQTKAEVEQV-----ELPDGKKRRKVLALPSHRGPKIRLRDKGKVKP--- 759
Query: 925 ADVQHKKKVKHQVEQQRKRPKK-------NKEPIGRDVVDKLDVLIEQYRSKFLQQRSDR 967
H KK K Q+ Q ++ ++ K+ G + + L+EQY+ K L
Sbjct: 906 ---VHPKKPKPQINQWKQEKQQLSSEQVSRKKAKGNKTETRFNQLVEQYKQKLL------ 759
BLAST of CcUC02G022420 vs. ExPASy Swiss-Prot
Match:
P37838 (Nucleolar protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOP4 PE=1 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 2.9e-25
Identity = 156/609 (25.62%), Postives = 241/609 (39.57%), Query Frame = 0
Query: 287 GEGSKTQ-KWKVIVRNLPFKAKEK-EIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFT 346
GE S + K K+I+RN+P+ ++ ++K F G V + +P D G GFAFV
Sbjct: 138 GEDSMLKGKPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRD-GKLCGFAFVTMK 197
Query: 347 CKQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSD 406
+ A++ K R +AVD+AV K + A + +D + E E +
Sbjct: 198 KISNCRIALENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDNESGNEDA---- 257
Query: 407 DFKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEAL 466
E++ +DE+ ED + + S + +A+
Sbjct: 258 ----------EENHDDEEDENEEEDRQVDQASKNKESKRKAQ------------------ 317
Query: 467 PSSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYI 526
NK DF +V++
Sbjct: 318 ------------NKREDF--------------------------------------SVFV 377
Query: 527 GNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVA 586
N+P+D E + FS FG V +PV+ + T KGT F+ FK + +A A
Sbjct: 378 RNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKNAPAA 437
Query: 587 SGVGIFL----------RGKPLKVLNALDRKSA---HDKELEKSKN------DNHDHRNL 646
+ + G+ L + L R+ A +K K K D RNL
Sbjct: 438 GSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGEKDRRNL 497
Query: 647 YLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKL-QSPNFHVSRTRLVIHNLPKSMK 706
YL EG ++EG+ A+ ++ +DME R++ K R +L ++P+ H+S TRL I NLP++M
Sbjct: 498 YLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNLPRAMN 557
Query: 707 EKELQKLCIEAVTSRATKQK----------PVIR----QIKFL----------KDVKKG- 766
+K L+ L +AV AT+ K +IR + KF+ KD K G
Sbjct: 558 DKALKALARKAVVEFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIEAQKKKDKKSGV 617
Query: 767 ----------KLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPET--------------- 820
K T S G FVEF +H++AL+ LR LN + T
Sbjct: 618 VKQAKVIMEVKGSTAGRSRGYGFVEFRDHKNALMGLRWLNCHAVTSDEILEGLNDDEKKQ 653
BLAST of CcUC02G022420 vs. ExPASy Swiss-Prot
Match:
O74400 (Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC4F6.14 PE=1 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 1.3e-20
Identity = 151/607 (24.88%), Postives = 245/607 (40.36%), Query Frame = 0
Query: 296 KVIVRNLPFKAKE-KEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIK 355
++I+RNLP+ K+ + ++ FS G V ++ +P + G GFAFV ++ AE A+
Sbjct: 108 RLIIRNLPWSIKKPQHLEPHFSKFGKVREIKIP-TKGGGRMCGFAFVWMKDRKAAEEAMN 167
Query: 356 KFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDDFKAENTAVH 415
NG + R IAVDWAV S D F+A
Sbjct: 168 SLNGTEIDGRPIAVDWAV-----------------------------SKDAFEA------ 227
Query: 416 EKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPS 475
+ ++SSE+ KE +S EG + + +SA +DG+
Sbjct: 228 -----TTLKDASSEEENKEFVSD----EGHSIVTE-------DASADSESEEEVDGH--- 287
Query: 476 KVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQ-TDEDDLKRTVYIGNLPFDIDN 535
KE +S ++ S+V D + G + K SI + D + L+ TV++ NL F+
Sbjct: 288 SEGKELAGESEEEGSNVDD--VEDSGDSSSDKNSINHEIRDNEGLEDTVFVRNLLFECTE 347
Query: 536 EEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFK-------------------TVNAA 595
+E+ F FG + V T R G GF+KF+ A
Sbjct: 348 QELYNHFRQFGPLAYAKLVKDPATDRSLGRGFIKFRYEKDCQNCLEMASQLPTQEPTEAE 407
Query: 596 TAAVSSANVASGVG-------IFLRGKPLKVLNALDRKSAHD------KELEKSKNDNHD 655
+ S V G+ L G+ LKV +A+ RK A D +E ++ D
Sbjct: 408 KRFLPSVLVDEGIDTDSVSSRFLLHGRLLKVTSAVTRKEASDINQKSLQERKQKMGKGVD 467
Query: 656 HRNLYLAQEGIILEGTPAAEGVSASDMEKR-QRLEKKRTTKLQSPNFHVSRTRLVIHNLP 715
R+L+L EG I P +S +D R Q + +++ ++P H+S RL I N+
Sbjct: 468 RRHLFLLNEGKIAADHPLFNSLSETDKTLRSQSIAQRKKLLEKNPTLHLSLNRLSIRNIS 527
Query: 716 KSMKEKELQKLCIEAV-----------TSRATKQKPVIRQIKFLKDVKKGKLLTK----- 775
+ + K L L +A+ + T+++ + + LK K G +L +
Sbjct: 528 RHIDPKILAMLGRQAIRGFMDDVSKGLRANITEEEENLDKGHRLKRGKSGGVLKQAKVET 587
Query: 776 -----NHSCGVAFVEFSEHEHALVALRVLNNNPETFGPI--------------------- 820
S G F++F H++AL+ALR LN T I
Sbjct: 588 EKAGAGRSKGFGFMQFISHKYALMALRWLNGREITVKKIIDAEIEWARKHKIPEPQLPNI 647
BLAST of CcUC02G022420 vs. ExPASy Swiss-Prot
Match:
P27476 (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NSR1 PE=1 SV=1)
HSP 1 Score: 51.6 bits (122), Expect = 5.8e-05
Identity = 60/260 (23.08%), Postives = 119/260 (45.77%), Query Frame = 0
Query: 355 KFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDDFKAENTAVH 414
K + Q ++ AV + + SS +S+ +S+ ++E S S + + +++
Sbjct: 15 KASKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSSSDSESSSSSSSDS 74
Query: 415 EKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPS 474
E + K+ES S D SS+ E E E +K E+ SSS+ + SS D S
Sbjct: 75 ESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKE-ESKESSSSDSSSSSSSD----S 134
Query: 475 KVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIGNLPFDIDNE 534
+ KE D +KS D ++ +E ++ ++ +E + T+++G L + ID+E
Sbjct: 135 ESEKEESNDKKRKSEDAEEEE-------DEESSNKKQKNEETEEPATIFVGRLSWSIDDE 194
Query: 535 EVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGVGIFLRGK 594
+K+ F G V+ + + T R +G G++ F+ + A A+ G + G+
Sbjct: 195 WLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQ-----GKEIDGR 254
Query: 595 PLKVLNALDRKSAHDKELEK 615
P+ + + + ++ +K
Sbjct: 255 PINCDMSTSKPAGNNDRAKK 257
BLAST of CcUC02G022420 vs. ExPASy TrEMBL
Match:
A0A1S3BIA6 (RNA-binding protein 28 OS=Cucumis melo OX=3656 GN=LOC103490362 PE=4 SV=1)
HSP 1 Score: 1555.4 bits (4026), Expect = 0.0e+00
Identity = 835/974 (85.73%), Postives = 892/974 (91.58%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKN++ +DG +KGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNRRLKDGADKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRGFGFVQFAVAEDANRAI+LKNG+S EGRKITVKHAMHRAPLEQRRSKENQ AS
Sbjct: 61 TEHRGFGFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQVAASTL 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTSNSEGKERHLNARELA 180
N EGDTS+ EEQ N+DR TSKR+EQ +++RDTS++AEQT SNSEGKERHL+AR+LA
Sbjct: 121 EANVEGDTSEMEEQPTNKDRGTSKRDEQPIDKERDTSKRAEQTISNSEGKERHLSARKLA 180
Query: 181 SLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQ 240
SLSSYLEDK+GHSGKQRIARTVV GGLL+ DMAEDVH Q +D G +CSIVYPLPRKEVEQ
Sbjct: 181 SLSSYLEDKKGHSGKQRIARTVVIGGLLDGDMAEDVHRQVKDAGGVCSIVYPLPRKEVEQ 240
Query: 241 HGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR 300
HG+LRDGCKMDVSAVLF SVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR
Sbjct: 241 HGILRDGCKMDVSAVLFDSVKSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR 300
Query: 301 NLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQK 360
NLPFKAKEKEIK+TFSSAGFVWDVMMP +SDTGLSKGFAF+KFTCKQDAESAI+KFNG+K
Sbjct: 301 NLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFIKFTCKQDAESAIQKFNGKK 360
Query: 361 FGQRTIAVDWAVPKKIYSS--GASAPVDSDDGEQTERDREGSISSDDFKAENTAVHEKSQ 420
FGQRTIAVDWAVPKKIYSS GA+APVDSDD +QTERDRE SIS DF+ ENTA H +S
Sbjct: 361 FGQRTIAVDWAVPKKIYSSGGGANAPVDSDDEDQTERDRESSISGGDFEDENTAGHHES- 420
Query: 421 CSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPSKVNK 480
ESS EDSEKEDISSEV+FEGEAE+ARKVLE LISSSAKEALPS IDGNP SKVNK
Sbjct: 421 -----ESSLEDSEKEDISSEVDFEGEAEIARKVLETLISSSAKEALPSLIDGNPASKVNK 480
Query: 481 EPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ 540
+PDFDSSKKSSD+SDKVSNE GKL+ESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ
Sbjct: 481 DPDFDSSKKSSDMSDKVSNEHGKLSESKTSILKQTDEDDLKRTVYIGNLPFDIDNEEVKQ 540
Query: 541 RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGVGIFLRGKPLKV 600
RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKT +AA AAVSSAN ASGVGIFL+G+ LKV
Sbjct: 541 RFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTTDAANAAVSSANAASGVGIFLKGRQLKV 600
Query: 601 LNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKR 660
LNALD+KSAHDKELEKSKNDNHDHRNLYLAQEG+ILEGTPAAEGVSASDMEKRQRLEKKR
Sbjct: 601 LNALDKKSAHDKELEKSKNDNHDHRNLYLAQEGLILEGTPAAEGVSASDMEKRQRLEKKR 660
Query: 661 TTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKK 720
TTKLQSPNFHVSRTRLVIHNLPKSMKEKEL KLCIEAVTSRATKQKPVIRQIKFLKDVKK
Sbjct: 661 TTKLQSPNFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQKPVIRQIKFLKDVKK 720
Query: 721 GKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA 780
GK+LTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA
Sbjct: 721 GKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKA 780
Query: 781 KLQAWSQDN-TANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVRN----KDEN 840
KLQAWSQDN TANVPKA RN +DT A DVHSNKNNSRKRKA+ DN V+ +DEN
Sbjct: 781 KLQAWSQDNSTANVPKARLRNDGSDTKARDVHSNKNNSRKRKAIDDNHLVKAQNHIEDEN 840
Query: 841 DNHVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSNGSVSMDSGKIKA 900
DNHVSNDV M+E+RA KKRKT P+IGNTN+ +QKPEGRR +P+KSS SMDS KI+
Sbjct: 841 DNHVSNDV-MQESRARKKRKTRPDIGNTNESQKQKPEGRRLIPQKSSKRPASMDSEKIEV 900
Query: 901 SQEADVQHKKKVKHQVE-QQRKRPKKNKEPIGRDVVDKLDVLIEQYRSKFLQQRSDRTDG 960
SQEAD Q KKKVKHQ+E QQRKRP KNKEPIGRD+VDKLDVLIEQY+SKFLQQRSDRTD
Sbjct: 901 SQEADAQQKKKVKHQIEQQQRKRPMKNKEPIGRDIVDKLDVLIEQYQSKFLQQRSDRTDS 960
Query: 961 EKKGSKQVRRWFQS 967
EKKGSKQVRRWFQS
Sbjct: 961 EKKGSKQVRRWFQS 967
BLAST of CcUC02G022420 vs. ExPASy TrEMBL
Match:
A0A6J1IDH9 (RNA-binding protein 28 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1551.6 bits (4016), Expect = 0.0e+00
Identity = 833/986 (84.48%), Postives = 896/986 (90.87%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQTTNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QA++VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNGQKFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KDE SSEDSEKEDISSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPSKVNKEP DSSKKSSD+SDKVSN P KL+E KTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPKA R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSN 900
PV+ K+ N+N HVSND+AMEE+RA KKRKT PE GN N+ +QKPEGRRSMPEK S
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSK 900
Query: 901 GSVSMDSGKIKASQEADVQHKKKVKHQVE-QQRKRPKKNKEPIGRDVVDKLDVLIEQYRS 960
S MD+ K KASQEADVQHKKK KHQVE QQRKR KKNK P+G+D VDKLD LIEQYRS
Sbjct: 901 RSAPMDTVKTKASQEADVQHKKKAKHQVEQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRS 960
Query: 961 KFLQQRSDRTDGEKKGSKQVRRWFQS 967
KF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 KFSQKSSDPADGEKKGSKQVRRWFQS 984
BLAST of CcUC02G022420 vs. ExPASy TrEMBL
Match:
A0A6J1IG31 (RNA-binding protein 28 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1551.2 bits (4015), Expect = 0.0e+00
Identity = 833/987 (84.40%), Postives = 896/987 (90.78%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQTTNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QA++VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNGQKFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KDE SSEDSEKEDISSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPSKVNKEP DSSKKSSD+SDKVSN P KL+E KTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPKA R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSN 900
PV+ K+ N+N HVSND+AMEE+RA KKRKT PE GN N+ +QKPEGRRSMPEK S
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSK 900
Query: 901 GSVSMDSGKIKASQEADVQHKKKVKHQVE--QQRKRPKKNKEPIGRDVVDKLDVLIEQYR 960
S MD+ K KASQEADVQHKKK KHQVE QQRKR KKNK P+G+D VDKLD LIEQYR
Sbjct: 901 RSAPMDTVKTKASQEADVQHKKKAKHQVEQQQQRKRAKKNKLPVGQDAVDKLDKLIEQYR 960
Query: 961 SKFLQQRSDRTDGEKKGSKQVRRWFQS 967
SKF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 SKFSQKSSDPADGEKKGSKQVRRWFQS 985
BLAST of CcUC02G022420 vs. ExPASy TrEMBL
Match:
A0A6J1GMF1 (RNA-binding protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111455599 PE=4 SV=1)
HSP 1 Score: 1549.3 bits (4010), Expect = 0.0e+00
Identity = 833/987 (84.40%), Postives = 898/987 (90.98%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSF NS+LEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFANSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ TASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQ TNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QAR+VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNG+KFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGKKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KD SSSEDSEKED+SSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDGSSSEDSEKEDVSSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPS VNKEP FDSSKKSSD+SDKVSN P KL+ESKTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSNVNKEPVFDSSKKSSDMSDKVSNGPEKLSESKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPK+ R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIG-NTNKLLRQKPEGRRSMPEKSS 900
PV+ K+ N+N HVSND+AMEE+R KK+KT PE G NTN+ L+QKPEGRRSMPEKSS
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRDRKKKKTRPESGNNTNESLKQKPEGRRSMPEKSS 900
Query: 901 NGSVSMDSGKIKASQEADVQHKKKVKHQVEQ-QRKRPKKNKEPIGRDVVDKLDVLIEQYR 960
S MD+ K KASQEADVQHKKK KHQVEQ QRKR KKNK P+G+D VDKLD LIEQYR
Sbjct: 901 KRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYR 960
Query: 961 SKFLQQRSDRTDGEKKGSKQVRRWFQS 967
SKF Q+ SD DGEKKGSKQVRRWFQS
Sbjct: 961 SKFSQKSSDSADGEKKGSKQVRRWFQS 985
BLAST of CcUC02G022420 vs. ExPASy TrEMBL
Match:
A0A6J1IIK5 (RNA-binding protein 28 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1473.8 bits (3814), Expect = 0.0e+00
Identity = 789/933 (84.57%), Postives = 850/933 (91.10%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ +DGGEKGAAAGDHCPSKVFVKNLPYSFTNS+LEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSKENQATASKS 120
TEHRG+GFVQFAVAEDAN+AI+ KNG+S+EGRKITVKHAMHRAPLEQRRSKENQ ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 121 TINEEGDTSKREEQTINEDRDTSKREEQTTNEDRDTSEKAEQTTS--------------N 180
N+EGDTS+REEQT NED DTSKREEQTTNED DTSEK EQTT+ N
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 181 SEG-KERHLNARELASLSSYLEDKEGHSGKQRIARTVVFGGLLNADMAEDVHCQARDVGD 240
SEG KERHLNA++LA LSSYLEDKEG SGKQRIARTVV GGLLNADMAEDVH QA++VG
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 241 ICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMKGGVVWARQL 300
+CSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTC 360
GGEGSKTQKWK+IVRNLPF+AKEKEIKDTFSSAGFVWDVM+PHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 361 KQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSGASAPVDSDDGEQTERDREGSISSDD 420
KQDAE+AIKKFNGQKFG+RTIAVDWA+PKKIYSSGA+APVDSD+GE+TE+DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 421 FKAENTAVHEKSQCSNKDESSSEDSEKEDISSEVNFEGEAEMARKVLENLISSSAKEALP 480
+ EN AVH KSQ S+KDE SSEDSEKEDISSE++FEGEAE++RKVLENLI+SSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 481 SSIDGNPPSKVNKEPDFDSSKKSSDVSDKVSNEPGKLNESKTSILKQTDEDDLKRTVYIG 540
S IDGNPPSKVNKEP DSSKKSSD+SDKVSN P KL+E KTSILK DE+DLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 541 NLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVAS 600
NLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT +AATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 601 GVGIFLRGKPLKVLNALDRKSAHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSA 660
GVGIFL+G+ LKVLNALD+KSA++KELEKSKNDN DHRNL LAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 661 SDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
SDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 721 VIRQIKFLKDVKKGKLLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEF 780
VIRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 781 AIDNVQTLKLRKAKLQAWSQDNTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNR 840
A+DNVQ LKLRKAKLQA QDNTANVPKA R N DT AGD+HSNK NSRKRKA GDNR
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHR--NADTNAGDIHSNKTNSRKRKATGDNR 840
Query: 841 PVRNKDENDN----HVSNDVAMEENRAIKKRKTHPEIGNTNKLLRQKPEGRRSMPEKSSN 900
PV+ K+ N+N HVSND+AMEE+RA KKRKT PE GN N+ +QKPEGRRSMPEK S
Sbjct: 841 PVKEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSK 900
Query: 901 GSVSMDSGKIKASQEADVQHKKKVKHQVEQQRK 915
S MD+ K KASQEADVQHKKK KHQVEQ +
Sbjct: 901 RSAPMDTVKTKASQEADVQHKKKAKHQVEQHSR 931
BLAST of CcUC02G022420 vs. TAIR 10
Match:
AT2G21440.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 792.3 bits (2045), Expect = 4.2e-229
Identity = 490/1034 (47.39%), Postives = 658/1034 (63.64%), Query Frame = 0
Query: 1 MGKNKKRRDGGEKGAAAGDHCPSKVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGS 60
MGKNK+ R GE+ H + V V LPYS TN++LEE FS+VGPVRRCF+VT KGS
Sbjct: 1 MGKNKRERKDGEE---KSPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGS 60
Query: 61 TEHRGFGFVQFAVAEDANRAIELKNGMSVEGRKITVKHAMHRAPLEQRRSK--------- 120
EHRGF FV+FA+ ED NRAIELKNG +V GR+ITVK A HR L++RR+K
Sbjct: 61 DEHRGFAFVKFALQEDVNRAIELKNGSTVGGRRITVKQAAHRPSLQERRTKAAEGISVPD 120
Query: 121 ENQATASKSTINEEGDTS--------------KREEQTINEDRDTSKREEQTTNE----- 180
+Q + K T E D K+ E+ I E + K E+ E
Sbjct: 121 NSQGQSDKDTSIPETDEKVSPPEKKLEKPVERKKVEKPI-ERKQVEKPVERKKAEKPIEL 180
Query: 181 ------------DRDTSEKAEQTTSNSEGKERHLNARELASLSSYLEDKEGHSGKQRIAR 240
++ K + + E+ + + L L DKE S KQR+AR
Sbjct: 181 KQVEKPFERKQVEKPVERKQVEKPVERKQVEKPIERKRPTKLHVDLPDKETCSDKQRVAR 240
Query: 241 TVVFGGLLNADMAEDVHCQARDVGDICSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASV 300
TV+FGGL NA+MAE VH + +++G +CS+ YPLP++E++Q+GL +DGC+ + SAVLF SV
Sbjct: 241 TVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSV 300
Query: 301 KSARAAVTILHQKEMKGGVVWARQLGGEGSKTQKWKVIVRNLPFKAKEKEIKDTFSSAGF 360
KSA AAV LHQ E+KG ++WARQLGGEGSK QKWK+I+RNLPF+AK +IK FS+ GF
Sbjct: 301 KSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNLPFQAKPSDIKVVFSAVGF 360
Query: 361 VWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKKFNGQKFGQRTIAVDWAVPKKIYSSG 420
VWDV +P + +TGL KGFAFVKFTCK+DA +AIKKFNG FG+R IAVDWAVPK IY+
Sbjct: 361 VWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKFNGHMFGKRPIAVDWAVPKNIYNGA 420
Query: 421 ASAPVDSDDGEQTERDREGSISSDDFKAENTAVHEKSQCSNKDESSSEDSEK-------- 480
A A S DG++ D + SS D + + AV + + + S K
Sbjct: 421 ADATTASADGDKEGSDGDSENSSVDLEEVDEAVESHPPPGDDTDDDEDGSNKLTESDALD 480
Query: 481 EDISSEVNFEGEAEMARKVLENLISSSAKEALPSSIDGNPPSKVNKEPDFDSSKKSSDVS 540
+D+ +++NFE EA++ARKVL+NL++SS G+ + + + D SK S +
Sbjct: 481 KDVGTDMNFEDEADVARKVLKNLLASS---------KGSTATPEGETEESDKSKLKSSST 540
Query: 541 DKVS-----NEPGKLNESKTSILKQT-DEDDLKRTVYIGNLPFDIDNEEVKQRFSGFGEV 600
V+ +EP K ++K K+T D DD +RT++I NLPFD+ EEVKQRF+ FGEV
Sbjct: 541 KPVADSSGVSEPLKSGKTKVVAPKETQDNDDFERTLFIRNLPFDVTKEEVKQRFTVFGEV 600
Query: 601 LSFVPVLHQVTKRPKGTGFLKFKTVNAATAAVSSANVASGVGIFLRGKPLKVLNALDRKS 660
S VLH+VTKRP+GT F+KFKT +A+ AA+S+A+ ASGVG+ L+G+ L V+ A+ +K+
Sbjct: 601 ESLSLVLHKVTKRPEGTAFVKFKTADASVAAISAADTASGVGVLLKGRQLNVMRAVGKKA 660
Query: 661 AHDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSPN 720
A D EL+K++ N DHRNLYLA+EG IL+ TPAAEGVSA DM+KR+RL + + LQSPN
Sbjct: 661 AKDIELKKTEEKNVDHRNLYLAKEGQILDDTPAAEGVSAEDMDKRRRLHENKMKMLQSPN 720
Query: 721 FHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKKGKLLTKNH 780
FHVSRTRLVI+NLPKSM K+L +L ++AVTSRATKQKP IRQIKFL++ KKGK+ TKN+
Sbjct: 721 FHVSRTRLVIYNLPKSMNPKQLNRLLVDAVTSRATKQKPCIRQIKFLQNEKKGKVDTKNY 780
Query: 781 SCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWSQD 840
S GVAFVEF+EHEHALVALRVLNNNPETFGP +RP++EFA+DNVQ LK+R+AK Q + Q
Sbjct: 781 SRGVAFVEFTEHEHALVALRVLNNNPETFGPQHRPVIEFAVDNVQKLKIREAKQQQFQQR 840
Query: 841 NTANVPKAWQRNVNTDTIAGDVHSNKNNSRKRKAMGDNRPVRN----------KDENDNH 900
N Q N G+ + N +++ GDN R ++E+
Sbjct: 841 EKHNESDQQQAN-------GEAQAPDNKYKRKTREGDNTGPRKENAARFKKGPREESKEE 900
Query: 901 VSNDVAMEENRAIKKR----KTHPEIGNTNKLLRQKPEGRRSMPEKSSNGSVSMDSGKIK 960
+++A+++N A KKR + P +L+RQK + P+ S + S + K K
Sbjct: 901 AKSNIAVKDNAAEKKRPIRTQEKPSSNKKGQLMRQKETTEKPDPKISKDLS---EPRKRK 960
Query: 961 ASQEADVQHKKKVKHQVEQQRKRPKKNKEPIGRDVVDKLDVLIEQYRSKFLQQRSDRTDG 967
++ +++ QRKR K+ + G +VVDKLD+LIE+YRSKF Q S +T
Sbjct: 961 FGEDRGEENR-------NGQRKRKKQGQGQGGAEVVDKLDLLIEKYRSKF-SQSSAKTGP 1003
BLAST of CcUC02G022420 vs. TAIR 10
Match:
AT4G24770.1 (31-kDa RNA binding protein )
HSP 1 Score: 61.2 bits (147), Expect = 5.2e-09
Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0
Query: 24 KVFVKNLPYSFTNSKLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDANRAIEL 83
+V+V NLP+ N +LE+ FS+ G V +V + + RGFGFV + ++ N AI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 84 KNGMSVEGRKITVKHAMHRAP 105
+G ++EGR I V A R P
Sbjct: 305 LDGQNLEGRAIRVNVAEERPP 325
BLAST of CcUC02G022420 vs. TAIR 10
Match:
AT5G18810.1 (SC35-like splicing factor 28 )
HSP 1 Score: 60.5 bits (145), Expect = 8.8e-09
Identity = 27/75 (36.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 297 VIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKKF 356
+++RNLP A+ +++D+F G + D+ +P + TG +GF FVK+ +DA A+K+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 357 NGQKFGQRTIAVDWA 372
N + G R IA+ +A
Sbjct: 109 NHKVIGGREIAIVFA 123
BLAST of CcUC02G022420 vs. TAIR 10
Match:
AT5G06210.1 (RNA binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 58.9 bits (141), Expect = 2.6e-08
Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = 0
Query: 296 KVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKK 355
K+ + L F E+ + + FS G V + + + SKGF FV F +A+ A+ +
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 356 FNGQKFGQRTIAVDWAVPKKIYSSGASAPV 386
FNGQ+ RTI VD+A K+ G P+
Sbjct: 95 FNGQQLNGRTIFVDYAKAKQSLGGGGGYPI 124
BLAST of CcUC02G022420 vs. TAIR 10
Match:
AT4G20030.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 58.2 bits (139), Expect = 4.4e-08
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 0
Query: 296 KVIVRNLPFKAKEKEIKDTFSSAGFVWDVMMPHSSDTGLSKGFAFVKFTCKQDAESAIKK 355
K++VRNLPF E +K FS+ G + +V + SKG+AF++FT + DA AI+
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIET 100
Query: 356 FNGQKFGQRTIAVDWAVPKKIYSSG----ASAPVDSDDGEQTERD 397
+ + + R I +D A P K G + P SD+ E+ D
Sbjct: 101 MDRRMYNGRMIYIDIAKPGKRDFQGLPRTSGPPEKSDEPEEAAND 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8CGC6 | 3.1e-59 | 28.51 | RNA-binding protein 28 OS=Mus musculus OX=10090 GN=Rbm28 PE=1 SV=4 | [more] |
Q9NW13 | 5.9e-58 | 27.68 | RNA-binding protein 28 OS=Homo sapiens OX=9606 GN=RBM28 PE=1 SV=3 | [more] |
P37838 | 2.9e-25 | 25.62 | Nucleolar protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=... | [more] |
O74400 | 1.3e-20 | 24.88 | Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe (strain... | [more] |
P27476 | 5.8e-05 | 23.08 | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strai... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BIA6 | 0.0e+00 | 85.73 | RNA-binding protein 28 OS=Cucumis melo OX=3656 GN=LOC103490362 PE=4 SV=1 | [more] |
A0A6J1IDH9 | 0.0e+00 | 84.48 | RNA-binding protein 28 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |
A0A6J1IG31 | 0.0e+00 | 84.40 | RNA-binding protein 28 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |
A0A6J1GMF1 | 0.0e+00 | 84.40 | RNA-binding protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111455599 PE=4 SV=1 | [more] |
A0A6J1IIK5 | 0.0e+00 | 84.57 | RNA-binding protein 28 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |