CcUC02G020080 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G020080
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr02: 2673807 .. 2674151 (+)
RNA-Seq ExpressionCcUC02G020080
SyntenyCcUC02G020080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCACTTACTCAAATTCATGGAGCAAAGTGGCAAGTATTTGCAAGAATATGTTTTTGGCCCATTCTACTGTCAAAGGCAATGATGCAAAAATGCAACAGATTCCCCAATTAACAGCACTGAGTTTAACACCATTAACAATCTCTCCAGCAAACTCAATCACCATCACTTGTACAGTCAATACACCCACCAAGGAAATCACAAACCAGTGGCTTTGCAGCATAGCCTTAAACACTTCTACCCACTTTGTTACTAATCCCATAGCACCCATCAAATTGAACATCTGCCAAAGAATGAAGCTATTGAAAATCATGGTGTGCCTCACATCCTCCTCCATATGA

mRNA sequence

ATGAAATCCACTTACTCAAATTCATGGAGCAAAGTGGCAAGTATTTGCAAGAATATGTTTTTGGCCCATTCTACTGTCAAAGGCAATGATGCAAAAATGCAACAGATTCCCCAATTAACAGCACTGAGTTTAACACCATTAACAATCTCTCCAGCAAACTCAATCACCATCACTTGTACAGTCAATACACCCACCAAGGAAATCACAAACCAGTGGCTTTGCAGCATAGCCTTAAACACTTCTACCCACTTTGTTACTAATCCCATAGCACCCATCAAATTGAACATCTGCCAAAGAATGAAGCTATTGAAAATCATGGTGTGCCTCACATCCTCCTCCATATGA

Coding sequence (CDS)

ATGAAATCCACTTACTCAAATTCATGGAGCAAAGTGGCAAGTATTTGCAAGAATATGTTTTTGGCCCATTCTACTGTCAAAGGCAATGATGCAAAAATGCAACAGATTCCCCAATTAACAGCACTGAGTTTAACACCATTAACAATCTCTCCAGCAAACTCAATCACCATCACTTGTACAGTCAATACACCCACCAAGGAAATCACAAACCAGTGGCTTTGCAGCATAGCCTTAAACACTTCTACCCACTTTGTTACTAATCCCATAGCACCCATCAAATTGAACATCTGCCAAAGAATGAAGCTATTGAAAATCATGGTGTGCCTCACATCCTCCTCCATATGA

Protein sequence

MKSTYSNSWSKVASICKNMFLAHSTVKGNDAKMQQIPQLTALSLTPLTISPANSITITCTVNTPTKEITNQWLCSIALNTSTHFVTNPIAPIKLNICQRMKLLKIMVCLTSSSI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 37..73
score: 6.832403

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G020080.1CcUC02G020080.1mRNA