CcUC02G019900 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G019900
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	exopolygalacturonase-like
Location	CicolChr02: 2550746 .. 2552382 (-)
RNA-Seq Expression	CcUC02G019900
Synteny	CcUC02G019900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGATCAAATCAAGTTTTTTGGTTACTACATTCTTGATGTCCTTGTTATCATTTATTGTTGAGTCTCGATCTCATGTTGATGTTATTTTTCCTTTGAGGAAGTATGGTGATATTGTGCCCGATGCTGATGTCATTGAGGTAAACACACACAATAAAGTATATCTCAAAGTGATTACTTATTGAATTGATCAATTGTTTTTGCTAATTAACTTTTATTACCTATGGAACATAGGCTTTGAAAGATGCATGGAATGACGCATGTGCATCTGTTCGTCCAAGTGCAGTGATTATTCCAAAGGGGATATTTAAAGTAAGCGAAGTAAAATTTAAAGGCCCTTGCAAGAGCCCTATTGAAATTCGACTTCTAGGAACATTGTAGGCTCCAAAACACCCTTATGGAGATAGTTGAATTACTTTTGCATATGTTGATAGATTGATACTATTGGGCGGTAGAGTTTTTGATGGTCAAGGAAAGGCAGGTTGGGAAAAGAATGATTGCCATAAAAACATCAACTGTGCTAACCTCCCTATTGTAAGCTCTATACCTATTGTTTTATTTCAAAACTCATTCGTCTTTAATTTGTTGATTTTGAAGGGGTTTGTTAGATGTCGTAATTCTCTACTATTTTCATTTTTACAAATTGGTAAATGATCGTAATACTATATGATAATGTTTCAGGAATTAAATCTTAAACTAAATTTAATCGTTAAAAACTCATCATTTTGGTCTCTCCCTATAAAAAATTGTGGCTTTCTCATGACATGGCTTATTGATCATATAAAATGAACAAAGTTTAAGGTTCGATTTCATTACCAATTCAATTGTGAAGAGAATAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTTGGTCGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCTGAAAATAGTCCCAACACAGATGGAATACACATTGGCCGATCAATTGGGATCTCAATCACAAAGTCTCGAATAGCGACAGGAGATGATTGCATCTCCCTCGGAGATGGAAGCAAACGTGTAAAAGTCACGAACGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACCAATGAAGAGTCTGTTGAAGGTGTCATAGTAAAAAATTGCACCATAATGAACACTACTAATGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCTGGCACTGCCACCAACATGCATTTTTCAGATATTATAATGGTCAATGTTAGCAACCCAATTCTCCTTGACCAAGAGTATCGCCTATGGAATCAGTGTAATCGCAAGGTATTGATCGCATTCCAAAAACTTTGATTTTAAAATTCTTCATTTTAGCTTCATAAATAAACTTTAAATTTCATTTAAAATTTTCAGATTCCGTCAAAGATTAAGATTAACAAAGTAAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCAATGACAGTGAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGTAATAGACTGTCCTATTACATCTCAATATATGAATGTGAAACCTATCATTTTAGGGATACAAAATCCTCCAACGTGCTCTTCCCCTTAA

mRNA sequence

ATGGATGTGATCAAATCAAGTTTTTTGGTTACTACATTCTTGATGTCCTTGTTATCATTTATTGTTGAGTCTCGATCTCATGTTGATGTTATTTTTCCTTTGAGGAAGTATGGTGATATTGTGCCCGATGCTGATGTCATTGAGGCTTTGAAAGATGCATGGAATGACGCATGTGCATCTGTTCGTCCAAGTGCAGTGATTATTCCAAAGGGGATATTTAAAAGAATAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTTGGTCGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCTGAAAATAGTCCCAACACAGATGGAATACACATTGGCCGATCAATTGGGATCTCAATCACAAAGTCTCGAATAGCGACAGGAGATGATTGCATCTCCCTCGGAGATGGAAGCAAACGTGTAAAAGTCACGAACGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACCAATGAAGAGTCTGTTGAAGGTGTCATAGTAAAAAATTGCACCATAATGAACACTACTAATGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCTGGCACTGCCACCAACATGCATTTTTCAGATATTATAATGGTCAATGTTAGCAACCCAATTCTCCTTGACCAAGAGTATCGCCTATGGAATCAGTGTAATCGCAAGATTCCGTCAAAGATTAAGATTAACAAAGTAAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCAATGACAGTGAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGTAATAGACTGTCCTATTACATCTCAATATATGAATGTGAAACCTATCATTTTAGGGATACAAAATCCTCCAACGTGCTCTTCCCCTTAA

Coding sequence (CDS)

ATGGATGTGATCAAATCAAGTTTTTTGGTTACTACATTCTTGATGTCCTTGTTATCATTTATTGTTGAGTCTCGATCTCATGTTGATGTTATTTTTCCTTTGAGGAAGTATGGTGATATTGTGCCCGATGCTGATGTCATTGAGGCTTTGAAAGATGCATGGAATGACGCATGTGCATCTGTTCGTCCAAGTGCAGTGATTATTCCAAAGGGGATATTTAAAAGAATAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTTGGTCGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCTGAAAATAGTCCCAACACAGATGGAATACACATTGGCCGATCAATTGGGATCTCAATCACAAAGTCTCGAATAGCGACAGGAGATGATTGCATCTCCCTCGGAGATGGAAGCAAACGTGTAAAAGTCACGAACGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACCAATGAAGAGTCTGTTGAAGGTGTCATAGTAAAAAATTGCACCATAATGAACACTACTAATGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCTGGCACTGCCACCAACATGCATTTTTCAGATATTATAATGGTCAATGTTAGCAACCCAATTCTCCTTGACCAAGAGTATCGCCTATGGAATCAGTGTAATCGCAAGATTCCGTCAAAGATTAAGATTAACAAAGTAAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCAATGACAGTGAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGTAATAGACTGTCCTATTACATCTCAATATATGAATGTGAAACCTATCATTTTAGGGATACAAAATCCTCCAACGTGCTCTTCCCCTTAA

Protein sequence

MDVIKSSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACASVRPSAVIIPKGIFKRITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSSP

Homology

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BLAST of CcUC02G019900 vs. NCBI nr
Match: XP_038887188.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 506.9 bits (1304), Expect = 1.2e-139
Identity = 273/398 (68.59%), Postives = 286/398 (71.86%), Query Frame = 0


Query: 1   MDVIKSSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACAS 60
           M VI SS +VTTFLMSLLSF +E++S VDVIFPLRKYG+IVP  DV EALKDAWNDACAS
Sbjct: 1   MSVITSSIMVTTFLMSLLSFTIETQSRVDVIFPLRKYGNIVPGVDVTEALKDAWNDACAS 60

Query: 61  VRPSAVIIPKGIF----------------------------------------------- 120
           VRP AV+IPKGIF                                               
Sbjct: 61  VRPCAVVIPKGIFKVSEAKFKGPCKSPIEIRLRGSLQAPKHPYGDSWITFAYVNRLTLSG 120

Query: 121 ----------------------------------------KRITSLDSKNFHVNILGRNN 180
                                                   KRITSLDSKNFH+N+LG NN
Sbjct: 121 GGVFDGQGRAGWEKNDCHKNINCATLPISLRFDFITNSIVKRITSLDSKNFHINVLGCNN 180

Query: 181 LTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGP 240
           LTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGP
Sbjct: 181 LTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGP 240

Query: 241 GHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMV 300
           GHGISIGSLGKYTNEE VEGVI+KNCTIMNTTNGVRIKTWPASPV+GTATNMHFSDIIMV
Sbjct: 241 GHGISIGSLGKYTNEEPVEGVIIKNCTIMNTTNGVRIKTWPASPVSGTATNMHFSDIIMV 300

Query: 301 NVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEVK 312
           NVSNPIL+DQEY  WNQCNRKIPSKIKI+KVSFKNIRGSSATPM VKLICS  LPCDEVK
Sbjct: 301 NVSNPILIDQEYCPWNQCNRKIPSKIKISKVSFKNIRGSSATPMAVKLICSRKLPCDEVK 360

[Close]

BLAST of CcUC02G019900 vs. NCBI nr
Match: XP_031742281.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 2.8e-136
Identity = 272/398 (68.34%), Postives = 286/398 (71.86%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK S+ LVTTFLMSLLSFI+ESRSHVDVIFPLRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MGVIKYSNLLVTTFLMSLLSFIIESRSHVDVIFPLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIF---------------------------------------------- 120
           SVRPSAV+IPKGIF                                              
Sbjct: 61  SVRPSAVVIPKGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 -----------------------------------------KRITSLDSKNFHVNILGRN 180
                                                    KRITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIVKRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KS+IATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFKGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASP AG AT+MHFSDI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPNAGIATDMHFSDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNR+IPS IKIN VSFKNIRGSSATP+ VKLICSSN PC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNREIPSNIKINNVSFKNIRGSSATPVAVKLICSSNQPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. NCBI nr
Match: XP_008455553.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo] >TYK21621.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135
Identity = 272/398 (68.34%), Postives = 283/398 (71.11%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK SS LV TFLM+LLSF VESRSHVDVIF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MSVIKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S+RPSAV+IPKG FK                                             
Sbjct: 61  SLRPSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNRKIPSKIKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. NCBI nr
Match: KAA0059116.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135
Identity = 272/398 (68.34%), Postives = 283/398 (71.11%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK SS LV TFLM+LLSF VESRSHVDVIF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MSVIKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S+RPSAV+IPKG FK                                             
Sbjct: 61  SLRPSAVVIPKGTFKVREGEFKGPCKSPIEVRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKRIGCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNRKIPSKIKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. NCBI nr
Match: XP_031741749.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 2.9e-133
Identity = 266/398 (66.83%), Postives = 282/398 (70.85%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK S+ LVTTFLMSLLSF +ESRSH+DVIFPL KYG+IV  ADV EALK+AWNDACA
Sbjct: 1   MGVIKYSNLLVTTFLMSLLSFTIESRSHIDVIFPLEKYGNIVSGADVTEALKNAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           SV PSAV+IPKGIFK                                             
Sbjct: 61  SVHPSAVVIPKGIFKVREGKFKGPCKSPIEIRVRGTLQAPKHPYGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSL+SKNFHVNILG N
Sbjct: 121 GGGVFDGQGKTGWEKNDCHKRIDCANLPISLRFDFITNSIVRRITSLNSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSK+VKV NVTCG
Sbjct: 181 NLTFQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKQVKVANVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTI+NTTNGVRIKTWP SP AG ATNMHFSDI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIINTTNGVRIKTWPTSPAAGIATNMHFSDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNR+IPS IKINKVSF+NIRGSSATP+ VKLICSSNLPCDEV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNREIPSNIKINKVSFENIRGSSATPVAVKLICSSNLPCDEV 360

[Close]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-76
Identity = 133/244 (54.51%), Postives = 178/244 (72.95%), Query Frame = 0


Query: 68  IPKGIFKRITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSR 127
           +   I + +TS DSKNFHV + G  N+TF G  I AP +SPNTDGIH+G+S  + I  + 
Sbjct: 155 VNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTN 214

Query: 128 IATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNG 187
           I TGDDC+S+GDGSK++ V  V CGPGHG+S+GSLGK+T EE+VEG+ VKNCT+  T NG
Sbjct: 215 IGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNG 274

Query: 188 VRIKTWPASPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFK 247
           VRIKTWP +P   T +++HF DI M NV NP+++DQEY  WNQC++K PSKIK++K+SFK
Sbjct: 275 VRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFK 334

Query: 248 NIRGSSATPMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPT 307
           N++G+S T   V LICSS +PCD V++ N+DL +N    P T++  NVKP++ G    P 
Sbjct: 335 NVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFN--GAPTTAKCTNVKPLVTG--TAPV 394

Query: 308 CSSP 312
           C +P
Sbjct: 395 CQAP 394

[Close]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.4e-76
Identity = 139/242 (57.44%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 68  IPKGIFKRITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSR 127
           +   I + +T+LDSKNFHVN++G  NLTF    I A E S NTDGIHIGRS G++I  + 
Sbjct: 115 VTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTE 174

Query: 128 IATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNG 187
           I TGDDCISLGDGSK + +TN+TCGPGHGIS+GSLG+Y NEESV G+ VKNCTI  + NG
Sbjct: 175 IKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNG 234

Query: 188 VRIKTWPASPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFK 247
           VRIKTWP S   G A+ MHF DI M +V  PIL+DQ Y  +NQC  ++PS +K++K+SFK
Sbjct: 235 VRIKTWPKSE-PGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFK 294

Query: 248 NIRGSSATPMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPT 307
           NI+G+S T   VKL+CS + PC+ V++A+IDL Y+    P TS   N+KP I G Q P  
Sbjct: 295 NIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAI 354

Query: 308 CS 310
           CS
Sbjct: 355 CS 355

[Close]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 6.0e-73
Identity = 156/394 (39.59%), Postives = 208/394 (52.79%), Query Frame = 0


Query: 9   LVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVP-DADVIEALKDAWNDACASVRPSAVI 68
           +V +  + LL FI  S+   D    + K+G       D+ +   DAW +ACASV PS V+
Sbjct: 7   IVPSMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVV 66

Query: 69  IPKG-------------------------------------------------------- 128
           IPKG                                                        
Sbjct: 67  IPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIF 126

Query: 129 ----------------------------------IFKRITSLDSKNFHVNILGRNNLTFH 188
                                             + + ITS DSK FH+N+    N+T  
Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLE 186

Query: 189 GVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGPGHGI 248
            + I AP+ SPNTDGIH+G+S G++I  S I TGDDCIS+GDG+K + +  +TCGPGHGI
Sbjct: 187 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGI 246

Query: 249 SIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMVNVSN 308
           SIGSLGK+ NEE VEG+ + NCTI NT+NG RIKTWP     G  + +HF DI M NVS+
Sbjct: 247 SIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGAVSEIHFEDITMNNVSS 306

Query: 309 PILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEVKVANI 312
           PIL+DQ+Y  WN+C +   SK+K++ +SFKNIRG+SA P  +K ICS + PC  V++A+I
Sbjct: 307 PILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADI 366

[Close]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-72
Identity = 156/394 (39.59%), Postives = 207/394 (52.54%), Query Frame = 0


Query: 9   LVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVP-DADVIEALKDAWNDACASVRPSAVI 68
           +V +  + LL FI  S+   D    + K+G       D+ +   DAW +ACASV PS V+
Sbjct: 7   IVPSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVV 66

Query: 69  IPKG-------------------------------------------------------- 128
           IPKG                                                        
Sbjct: 67  IPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIF 126

Query: 129 ----------------------------------IFKRITSLDSKNFHVNILGRNNLTFH 188
                                             + + ITS DSK FH+N+    N+T  
Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLE 186

Query: 189 GVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGPGHGI 248
            + I AP+ SPNTDGIH+G+S G++I  S I TGDDCIS+GDG+K + +  +TCGPGHGI
Sbjct: 187 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGI 246

Query: 249 SIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMVNVSN 308
           SIGSLGK+ NEE VEG+ + NCTI NT+NG RIKTWP     G  + +HF DI M NVS+
Sbjct: 247 SIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGAVSEIHFEDITMNNVSS 306

Query: 309 PILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEVKVANI 312
           PIL+DQ+Y  WN+C +   SK+K++ +SFKNIRG+SA P  +K ICS + PC  V++A+I
Sbjct: 307 PILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADI 366

[Close]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.7e-72
Identity = 126/238 (52.94%), Postives = 167/238 (70.17%), Query Frame = 0


Query: 74  KRITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDD 133
           K +TSLD+KNFH N++   N+TF  + IIAP  SPNTDGIH+GR  G+ I  ++IATGDD
Sbjct: 152 KDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDD 211

Query: 134 CISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTW 193
           CIS+GDG K + +  V CGPGHGIS+GSLG+Y  E+ V  + VKNCT+  T+NG+RIKTW
Sbjct: 212 CISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTW 271

Query: 194 PASPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSS 253
           P++    TA  +HF DII+  VSNPIL+DQEY  WNQCN+  PS IK+  ++F+NIRG+S
Sbjct: 272 PSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTS 331

Query: 254 ATPMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSSP 312
                VKL+CS   PC+ V++ +I++ Y   D P T +  NV P ++G QNP  C  P
Sbjct: 332 ENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNVTPKLVGAQNPKACVGP 389

[Close]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL
Match: A0A5A7UY44 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00230 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.9e-136
Identity = 272/398 (68.34%), Postives = 283/398 (71.11%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK SS LV TFLM+LLSF VESRSHVDVIF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MSVIKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S+RPSAV+IPKG FK                                             
Sbjct: 61  SLRPSAVVIPKGTFKVREGEFKGPCKSPIEVRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKRIGCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNRKIPSKIKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL
Match: A0A5D3DD75 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00190 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.9e-136
Identity = 272/398 (68.34%), Postives = 283/398 (71.11%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK SS LV TFLM+LLSF VESRSHVDVIF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MSVIKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S+RPSAV+IPKG FK                                             
Sbjct: 61  SLRPSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNRKIPSKIKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL
Match: A0A1S3C2F4 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.9e-136
Identity = 272/398 (68.34%), Postives = 283/398 (71.11%), Query Frame = 0


Query: 1   MDVIK-SSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK SS LV TFLM+LLSF VESRSHVDVIF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MSVIKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S+RPSAV+IPKG FK                                             
Sbjct: 61  SLRPSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPE+SPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKRVK+TNVTCG
Sbjct: 181 NLTFDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKYTNEE VEGVIVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M
Sbjct: 241 PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNRKIPSKIKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNRKIPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL
Match: A0A0A0K3B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.9e-131
Identity = 266/398 (66.83%), Postives = 277/398 (69.60%), Query Frame = 0


Query: 1   MDVIKS-SFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACA 60
           M VIK    LVTTFLMSLLSF +E+RSHVD IF LRKYG+IV  ADV EALKDAWNDACA
Sbjct: 1   MGVIKHLILLVTTFLMSLLSFTIEARSHVD-IFSLRKYGNIVSGADVTEALKDAWNDACA 60

Query: 61  SVRPSAVIIPKGIFK--------------------------------------------- 120
           S RPSAV+IPKG FK                                             
Sbjct: 61  SDRPSAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRMRLS 120

Query: 121 ------------------------------------------RITSLDSKNFHVNILGRN 180
                                                     RITSLDSKNFHVNILG N
Sbjct: 121 GGGVFDGQGKAGWEKNDCHKRIDCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCN 180

Query: 181 NLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCG 240
           NLTF GVNIIAPENSPNTDGIHIGRSIGISI KSRIATGDDCISLGDGSKR+KV NV CG
Sbjct: 181 NLTFQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICG 240

Query: 241 PGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIM 300
           PGHGISIGSLGKY NEE VEGVIV NCTI+NTTNGVRIKTWPASPVAG ATNMHFSDI M
Sbjct: 241 PGHGISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITM 300

Query: 301 VNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEV 311
           VNVSNPIL+DQEY  WNQCNR+IPS IKINKVSFKNIRGSSATP+ VKLICSSNLPC+EV
Sbjct: 301 VNVSNPILIDQEYCPWNQCNREIPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 360

[Close]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL
Match: A0A6J1C2C8 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007743 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.7e-123
Identity = 246/398 (61.81%), Postives = 271/398 (68.09%), Query Frame = 0


Query: 1   MDVIKSSFLVTTFLMSLLSFIVESRSHVDVIFPLRKYGDIVPDADVIEALKDAWNDACAS 60
           M  IKSSFLV  FLM LL F  ++RS VDV++ LRKYG +V  ADV +AL +AW DACAS
Sbjct: 1   MRTIKSSFLVAAFLMLLLEFTPKARSRVDVVYHLRKYGAVVSGADVSQALANAWKDACAS 60

Query: 61  VRPSAVIIPKGIF----------------------------------------------- 120
           VRPSAV+IP+GIF                                               
Sbjct: 61  VRPSAVVIPRGIFKVSKGNFRGPCKSRIEFRLRGTLQAPTHPKGESWITFAYIDRLTLLG 120

Query: 121 ----------------------------------------KRITSLDSKNFHVNILGRNN 180
                                                   KRITSLDSK+FHVNILG NN
Sbjct: 121 GGVFDGQGKAGWEKNDCHKSINCAKLPISLRFDFITNSTVKRITSLDSKHFHVNILGCNN 180

Query: 181 LTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCISLGDGSKRVKVTNVTCGP 240
           LTFHGVNIIAPE+SPNTDGIHIGRS GI+ITKSRIATGDDCISLGDGSKR+KVTNVTCGP
Sbjct: 181 LTFHGVNIIAPEDSPNTDGIHIGRSKGITITKSRIATGDDCISLGDGSKRIKVTNVTCGP 240

Query: 241 GHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMV 300
           GHGISIGSLG+YT EE V+GVIVKNCTIMNTTNGVRIKTWPAS   GTATNMHF DIIMV
Sbjct: 241 GHGISIGSLGRYTKEEPVKGVIVKNCTIMNTTNGVRIKTWPASADTGTATNMHFVDIIMV 300

Query: 301 NVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSATPMTVKLICSSNLPCDEVK 312
           NVS+PIL+DQEY  WNQCNR+IPSKIKI+KV+FKNIRGSSATP+ VKLICSS LPCDEVK
Sbjct: 301 NVSHPILIDQEYCPWNQCNRQIPSKIKISKVTFKNIRGSSATPVAVKLICSSGLPCDEVK 360

[Close]

BLAST of CcUC02G019900 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 4.9e-78
Identity = 135/235 (57.45%), Postives = 173/235 (73.62%), Query Frame = 0


Query: 76  ITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCI 135
           I+S+D+KNFH+N+LG  N+TF  V +IAP  SPNTDGIH+GRS G+ I  S+IATGDDCI
Sbjct: 155 ISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCI 214

Query: 136 SLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPA 195
           S+GDG K + V NV CGPGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTWP+
Sbjct: 215 SVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPS 274

Query: 196 SPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSAT 255
           +  A TA+ +HF +II+ NVSNPIL+DQEY  WNQCN++ PS IK+  +SFKNIRG+S  
Sbjct: 275 AACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGN 334

Query: 256 PMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSS 311
              VKL+CS   PC  V++ NI+L Y   D P T    NV P ++G QNP  CS+
Sbjct: 335 KDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKACSA 389

[Close]

BLAST of CcUC02G019900 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 6.4e-78
Identity = 133/236 (56.36%), Postives = 176/236 (74.58%), Query Frame = 0


Query: 76  ITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCI 135
           I+S+D+KNFH+N+LG  N+T + + I+APE+SPNTDGIH+GRS G+ I  S I+TGDDCI
Sbjct: 154 ISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCI 213

Query: 136 SLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPA 195
           S+GDG K + V  VTCGPGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTWP+
Sbjct: 214 SVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPS 273

Query: 196 SPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSAT 255
           +  + TA+++HF DII+ +VSNPIL+DQEY  WNQCN++  S IK+  +SFKNIRG+S  
Sbjct: 274 AACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGN 333

Query: 256 PMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSSP 312
              VKL+CS   PC  V++ +ID+ YN  D P T    NV P ILG Q+P  CS+P
Sbjct: 334 KDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKACSAP 389

[Close]

BLAST of CcUC02G019900 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 285.8 bits (730), Expect = 4.2e-77
Identity = 133/236 (56.36%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 76  ITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCI 135
           ITSLD+K+FH+N++G  N+TF  V IIAP  SPNTDGIH+GRS GI I  S I+TGDDC+
Sbjct: 154 ITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCV 213

Query: 136 SLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPA 195
           S+GDG K + V  VTCGPGHGISIGSLG+Y++EE+V G+ + NCT+  T NG+RIKTWP+
Sbjct: 214 SVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPS 273

Query: 196 SPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSAT 255
           +    TA+++HF +I++ NVSNPIL+DQEY  WNQCN++ PS IK+  +SFK IRG+S  
Sbjct: 274 AACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGN 333

Query: 256 PMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSSP 312
              VKL+CS   PC  V+V ++++ Y   D P T Q  NV P ++G Q P  CSSP
Sbjct: 334 KDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKACSSP 389

[Close]

BLAST of CcUC02G019900 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 4.6e-76
Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 0


Query: 76  ITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCI 135
           I+S+D+KNFH+N++G  N+TF  V I+AP  SPNTDGIH+GRS+G+SI  SRI+TGDDC+
Sbjct: 155 ISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCV 214

Query: 136 SLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPA 195
           S+GDG   + V NV CGPGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTWP+
Sbjct: 215 SVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPS 274

Query: 196 SPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSAT 255
           +  + TA+N+HF +II+ NVSNPIL+DQEY  WNQCN++  S IK+  +SF+ IRG+S  
Sbjct: 275 AACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGN 334

Query: 256 PMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCSSP 312
              VKL+CS   PC+ V+V +I++ Y   D P T    NV+P ++G Q P  C++P
Sbjct: 335 KDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKACNTP 390

[Close]

BLAST of CcUC02G019900 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 3.0e-67
Identity = 124/234 (52.99%), Postives = 167/234 (71.37%), Query Frame = 0


Query: 76  ITSLDSKNFHVNILGRNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSRIATGDDCI 135
           ITS +SK FH+NIL   N+T   + I AP  S NTDGIHIGRS G+++  ++I TGDDC+
Sbjct: 206 ITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCV 265

Query: 136 SLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEESVEGVIVKNCTIMNTTNGVRIKTWPA 195
           S+GDG++ + V NV CGPGHGISIGSLG+Y NE+ V+GV V+ C I NT NGVRIKTWP 
Sbjct: 266 SIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPG 325

Query: 196 SPVAGTATNMHFSDIIMVNVSNPILLDQEYRLWNQCNRKIPSKIKINKVSFKNIRGSSAT 255
           SP  G A+N+ F DI M NVS P+L+DQEY  +  C   +PSK+K++ V+ KNI+G+SAT
Sbjct: 326 SP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSAT 385

Query: 256 PMTVKLICSSNLPCDEVKVANIDLVYNVIDCPITSQYMNVKPIILGIQNPPTCS 310
            + VKL+CS  +PC  + +++I+LV+N  + P  S   N+KPI+ G   P  C+
Sbjct: 386 KVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACT 438

The following BLAST results are available for this feature:

BLAST of CcUC02G019900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887188.1	1.2e-139	68.59	exopolygalacturonase-like [Benincasa hispida]	[more]
XP_031742281.1	2.8e-136	68.34	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_008455553.1	1.8e-135	68.34	PREDICTED: exopolygalacturonase-like [Cucumis melo] >TYK21621.1 exopolygalacturo...	[more]
KAA0059116.1	1.8e-135	68.34	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_031741749.1	2.9e-133	66.83	exopolygalacturonase-like [Cucumis sativus]	[more]

BLAST of CcUC02G019900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	2.0e-76	54.51	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
P24548	3.4e-76	57.44	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q39766	6.0e-73	39.59	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	1.8e-72	39.59	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
P35337	6.7e-72	52.94	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of CcUC02G019900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY44	8.9e-136	68.34	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DD75	8.9e-136	68.34	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C2F4	8.9e-136	68.34	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1	[more]
A0A0A0K3B7	3.9e-131	66.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1	[more]
A0A6J1C2C8	1.7e-123	61.81	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007743 PE=3 SV...	[more]

BLAST of CcUC02G019900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07840.1	4.9e-78	57.45	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	6.4e-78	56.36	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	4.2e-77	56.36	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.6e-76	54.24	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	3.0e-67	52.99	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 91..117 e-value: 500.0 score: 9.4 coord: 118..139 e-value: 1000.0 score: 7.1 coord: 171..192 e-value: 0.32 score: 20.0 coord: 141..161 e-value: 2800.0 score: 4.1
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 74..289 e-value: 1.5E-69 score: 234.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 148..161
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 45..287 e-value: 4.5E-71 score: 241.5
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 24..74 coord: 74..309
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 24..74 coord: 74..309
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 44..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G019900.1	CcUC02G019900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity