CcUC02G017580 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G017580
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ras-related protein Rab-18
Location	CicolChr02: 463334 .. 468982 (-)
RNA-Seq Expression	CcUC02G017580
Synteny	CcUC02G017580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCTTCAAATTGATCACCAACTCACACAACCTTGCAATTTAGTAAAAATGAAGATCCGTCGAATTGTACAGTTAAAATGAGGCTTTTTTGTGGCTGTCTTACCAATCAATCCATCGGCTGAGTTGACTCCCGAGTTAAGGGCGATCTCGGTAGAGGACTCGGGCATTTTCATTTTCAATTCCCTTTTCAAATTCTATAACCTTCGCCACCACGAACAATTGATACGAAACCAAGATCAGGGACTTCTTCAATTTCTTTCTTTCTTTCTTTCTTTTCCTCTTCATTGGACGCGCCATCAATTTTGCAGCATTTGGGTATTAATTTTGATCCGTTTTAATGGGATGTCATGTTCGATTTCATTCTGATTCACTCAATTCCATTTCTGTCGCCGTTTCCCCCCTCTTTTCATGTTTTCAATAATATCTCCTTGGTAATGCCGCGCATGCTGTTTTGCTTTTTACATATCCGCTGAGATTTGGGTTTTCGTTTCTTTGATTAGGTATATAAATCGGAAAGCGATCTTATTTTTGAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGGTTAGTTCTACCATACGGATCAGATTTTAAGAATTAGTTTGGAATATCCCTTTTTGATTTTGTGGGATCTTGCGCATTCTTTTTGAAAATGAGCGTAGACAAATCGGTTGTCTTGTTTTCTGTGGAACATTGGTTTATCATTTTAAAGAAGATTGTTGAAAGATAATGAAATGCATGGTATTGAGATGAGATTGAGGGCAAAAAATTAAATGAGAAAATTGAGAGGACCATTGCTAAGAAAATGACGAATAAGATTAAGAGAGGCCATTAATCTTTCAACCGTATTTCATCGAGAGAAGAATGAAACTCTTAGATAATCAGGTCAAGTGTCATTTTTAGGATAGTGTAAGAAACTTAGCCACAATCGTATCTGAAAAAATGAAATGAGAAGTCATGAAGGGCTAATTTGTGTGTTAGTTTCTAATAGAAAATAATTTCTCCAAGTAATGTATGGTAAACTTTTATATCTTTGTACTGTTATTTGCAGGAATTGCATTATAGCACTACGAAAGGCCTTTATTACTTGCGTTTAATAAATGGTTAATTATAATATTATATTTTGTTTCTACTATGCTCCTTTACTAGTTTCTAGTTTGTAACTTTCCAAACATCAATGAAAAGTTCATTTTCACTTTTCATTGTCAAAAATATATATTGTATACTTTCTCCCAGCTCTATTATCACTGGTCGTTTATACTTTTGCATTCTGTTTTGTACTTACTGAACCTGCGTAAATATGTGCATATGTTCATCGTGCTGCTCTGGGATTATTAGTAGAATAGATTGCCTTTTACCTGTTATAAATTGGCTGAACTTCAAACTGCACAGCTGAAATTATGGATTCTCTCTTTCTTATTAAATTATTATTAACAAAATTGAGAATTTTGTATGGTATTGATTATAAATCCTACATCTGCATGTTTCATTGTGTTGGCTTGTTTGTTTAAAGTGCGAAACGCCAAAAGCCTTGCTAACTTCTACTTAATTTGTCTTGCGATGGCGGGTAATCATCAGAGAACCAGAAATCATTTCTAATTAGTTGATTGTTATTTTCGTGCGCAGGTGTGGATTTTAAAGTAAAATATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGGTAATTAAGCTTCTCCACATGCATGATTTTTGTAGCATTCTTCTATTCTTTCTTCTTCCTCCATTTTCCTTTTTGAGAGGGCGTTCTCTTTTCCACACATGCAAGATGCATGTTTTTGCAGAGAAGCCCCGATTAGATAAGTAAGATGGTTAATTTACCAGAAGATATTGCATGGTTGATTCTCAATTGCTTAACTATAATTAAGAAGAATAGGCAGCTGGATAGTATACTAAACTATATATACATTGAGGATTGGCCATTTGCATAGCTTGTTCTTTCTTCACCAGCTCAAGGTTGACTTTTACTTCATGGTCTTGTCATGAACTCCAGCAGAAACTAGTAGGAAATCCATACAGTAATCCTTGATTCATCATATTTTTCACTTGTGTTGCTTGTGGAAGTTGGAACAATTTGATACCCAAACCATGAGGCATTAAATAAATGGATGACAAGACAATAAATTTATCAATTGAGGAATAGATCTGTAAGGCAAAAATGCATGCTAACCTTTGACCATAAGTGTGCCTGGCTCATGGTTCTGCTGTACTGTACAGACAAATGCAACATGAATGAACTCTGCACGTTCATGTATACAGCTTTGTTGAACCTGCAGCGTGCTAGAGCTTTTTCATCGAATGTTTGAATTAAATTTGAATCTGACTTAACAGACTAAGGAATTGCTCAAAGGATAGATCAGGCTTATTCTAATTCTCAATTGTTTTCCGATGGTTCTTGTGCTGTGAATTATAAAGATGATATGATTCTTCTTGTTGATTATCCATGACTTATGCGATCGTACTAGGGCATTACTTCTTATATATTCTTGTACTGAACCTGCATGAAAAAAATCTGGTTTACCAGATCTCCAAACAAGGCATTCTGTAGAATCTAACTCAATGTTCAATCATACAGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGCGCTCAAGGGATCATTATGGGTGCGTTCTCCTTCTTTATTTGATTGTTTTGAAGGGAAGAAATTTTCGGCTTAGTATAAATATTCAATATCTTAGATGTGTTCAGTTTAAACGTGTTCATGATTTTATCAAATGGTAAGTTCATTTGTTTGGCTGTCCAACACTATTCTACTGCCTTTTGTATTGTGTTGTGTTGATTATGACATCAAAGGTCAACCGTGTCAGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGTATGCATCTTCAACTTCCATTTGAAAATTTCCATACACCTGAAGCCGTTTACTGTAACATTTGCATAGATGTTGGTTAATTGATCAATTATATGGTGAATTGAAATTCATATTCCAAAGAATTTTCAGGTTAATTACTGATAAACATATTGATAACTTAAGAACCGATTAAATGAGTCATTACCCTTTCAAAGGAATTATATTGCCCATTTCCCTTTAGGAAGATTTGTATGAACGTTTCATATTAGTATTTCTAACAAATTTGTTTCTTATAAAAAAAAGGGTACTTTATATATTTTTTTGGGCTAAATTACAAAAAGAAAACCCTGAACTATGAACCAACTATGAAGTTGGTTTCGATTATATCCTCAAACTTTAAAAAGTTTCACTTTAATCCTTAAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTCATAATGATCCTTGAAGCTTTTGCCATTAAATTCATGGATGGAAAAGTGTGTCTGCATATGTGTTGCTTTAATGAACAAATTTAAACACATGTGAGAAGTAAATTTGGAGGTTAGGGTTAGCCAAAAAATAATAAAAAAAAAAAGAACAGACAATTGAGGGCTTGGGGTTGACATGAGGAAAATGACAACAGATTTGGTCCACAAATGCGCCATGTGTTTATTGATTTTTCCATGTCTGTATTTAGATTTGTTCACTTAAGTAGGTGCGAACTTTTTTTTTTTCTATGAACTTAGTGACTAAAGCCTATAAAGATTGTTTTGAAACAAACTTCAAATTTGAAACTTTTAAAAGTTTTTGAGGGTATAATTAAAACCATAACCCTATAGTGCAGTTGTATTTTTGATAGTTTAACCCTAATTTATTTATTTATTTATTATTATTATTGTTTGTGTTAACGGTAACCAAACTTTCAATAGGAAGAACCTCAGAACAAAAACGCATGTTCAACATACACTAAATGTGAAGTTTGGTTCTTTGAGATTCTTTTAATTTCTTATTATATTGTTTTTCATTGTCTGCGTCTAACTTATTTTTCACCTTGAATTTTCTTCTTCAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGGTAAACAATATCAGTTTAGTACTACTTTTGGTTCATTTGTTGGTCAAAGGATTTATATTGATTGGTAACTAGCAGGCACATGGTGTTTCCTGTTGTAACAATCACATTTCTTATGTTTTTCAAAAGGTAAAAGCTGTCACATTCCTGGTAGATTCATAAATAGGTTAAAACATCTAGTGAGTGGCTAGGCATTGGAAAAAAATTCATGTTTTAACAATGCTAAAATTTTCCTCTTCTTTTTCCCCTCATTTTAAAATTTAGAAATAACCTGCGAACTCAATGAATGTTGCACATGGTAATAACGATTCTAATATGCAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTATTTTCTAAATTATTGTAAAACTATAGTAGAGAAGCATGGTGTTACAGCTTTTATTATGTCTCTCTCTCCCAACTTACCTTACGAATTGAAAGGGCAGTCGTGTCTTCTTGCTGTTTTTCTTGTACAGGGAAAAGTTGAAATGGAAATATAAGATGCATGATTTCACTGTC

mRNA sequence

ATCCTTCAAATTGATCACCAACTCACACAACCTTGCAATTTAGTAAAAATGAAGATCCGTCGAATTGTACAGTTAAAATGAGGCTTTTTTGTGGCTGTCTTACCAATCAATCCATCGGCTGAGTTGACTCCCGAGTTAAGGGCGATCTCGGTAGAGGACTCGGGCATTTTCATTTTCAATTCCCTTTTCAAATTCTATAACCTTCGCCACCACGAACAATTGATACGAAACCAAGATCAGGGACTTCTTCAATTTCTTTCTTTCTTTCTTTCTTTTCCTCTTCATTGGACGCGCCATCAATTTTGCAGCATTTGGGTATATAAATCGGAAAGCGATCTTATTTTTGAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGTGCGAAACGCCAAAAGCCTTGCTAACTTCTACTTAATTTGTCTTGCGATGGCGGGTGTGGATTTTAAAGTAAAATATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGCGCTCAAGGGATCATTATGGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTATTTTCTAAATTATTGTAAAACTATAGTAGAGAAGCATGGTGTTACAGCTTTTATTATGTCTCTCTCTCCCAACTTACCTTACGAATTGAAAGGGCAGTCGTGTCTTCTTGCTGTTTTTCTTGTACAGGGAAAAGTTGAAATGGAAATATAAGATGCATGATTTCACTGTC

Coding sequence (CDS)

ATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGTGCGAAACGCCAAAAGCCTTGCTAACTTCTACTTAATTTGTCTTGCGATGGCGGGTGTGGATTTTAAAGTAAAATATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGCGCTCAAGGGATCATTATGGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCAGTTGTTGCTGA

Protein sequence

MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICLAMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC

Homology

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BLAST of CcUC02G017580 vs. NCBI nr
Match: XP_038901438.1 (ras-related protein RABC1-like [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.7e-110
Identity = 207/227 (91.19%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFT+DSFEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTTDSFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWAREIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESFRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of CcUC02G017580 vs. NCBI nr
Match: XP_022156664.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 206/227 (90.75%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI               
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of CcUC02G017580 vs. NCBI nr
Match: XP_004147350.1 (ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa_016939 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 3.1e-108
Identity = 204/227 (89.87%), Postives = 207/227 (91.19%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of CcUC02G017580 vs. NCBI nr
Match: XP_008460888.1 (PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-related protein RABC1-like [Cucumis melo var. makuwa] >TYK02071.1 ras-related protein RABC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 203/227 (89.43%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

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BLAST of CcUC02G017580 vs. NCBI nr
Match: XP_022971628.1 (ras-related protein RABC1-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 201/227 (88.55%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGK+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN
Sbjct: 61  ---GVDFKVKYVTAGGKRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKEKPPQPDAS SSCC
Sbjct: 181 NVQQCFEELVLKILETPSLLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.9e-93
Identity = 171/227 (75.33%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTI               
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LS++WA+EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRV
Sbjct: 121 LSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.3e-80
Identity = 145/227 (63.88%), Postives = 177/227 (77.97%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTI               
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTN
Sbjct: 61  ---GVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           L +VW +EI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR 
Sbjct: 121 LVDVWGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQ 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEEL LKI++ PSLL EGS  V+RNI K+KP     + S CC
Sbjct: 181 NVEQCFEELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-70
Identity = 135/227 (59.47%), Postives = 166/227 (73.13%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTI               
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF N
Sbjct: 61  ---GVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           L+++WA+EI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR 
Sbjct: 121 LADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRE 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV  CFEEL LKI++ PSLL EGS  V+R       P   A    CC
Sbjct: 181 NVNGCFEELALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-57
Identity = 113/196 (57.65%), Postives = 137/196 (69.90%), Query Frame = 0


Query: 11  DYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICLAMAGVDFKVK 70
           DY FK+L++GDSGVGKS +L  FTS  FE+ + + +                 GVDFKVK
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTI-----------------GVDFKVK 66

Query: 71  YVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREID 130
           Y+TA GK+ KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W RE D
Sbjct: 67  YLTADGKRCKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFD 126

Query: 131 LYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELV 190
           +YST +  IKM+V NKVD  + R V+ +EG D AR +GCLF+E SA+  + V Q FEEL+
Sbjct: 127 IYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELL 185

Query: 191 LKILDTPSLLSEGSKG 207
           LKILDTP LL   + G
Sbjct: 187 LKILDTPLLLETTAVG 185

[Close]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-50
Identity = 111/213 (52.11%), Postives = 138/213 (64.79%), Query Frame = 0


Query: 15  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIVRNAKSLANFYLICLAMAGVDFKVKYVT 74
           K+L+IG+SGVGKSSLLL FT D+F+ +L+ TI                  GVDFKVK + 
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATI------------------GVDFKVKTIA 69

Query: 75  AGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREIDLYS 134
             G + KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVT+R+TFT L E W  E++ Y 
Sbjct: 70  IDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYC 129

Query: 135 TNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKI 194
           T  D +KMLVGNK+DK++ R V + EG+  AR++  LFIE SAKTR  VQ  FEELV KI
Sbjct: 130 TRNDLVKMLVGNKIDKDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKI 189

Query: 195 LDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSC 227
           L TP L     +     +   +P +  A    C
Sbjct: 190 LQTPGLWESSIQNHGVQLSDNEPQRQGACGGYC 202

[Close]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL
Match: A0A6J1DU73 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.0e-110
Identity = 206/227 (90.75%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI               
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL
Match: A0A0A0LQC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108
Identity = 204/227 (89.87%), Postives = 207/227 (91.19%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL
Match: A0A5D3BQN6 (Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00560 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.5e-108
Identity = 203/227 (89.43%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL
Match: A0A1S3CDH6 (ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.5e-108
Identity = 203/227 (89.43%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL
Match: A0A6J1I7F2 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107
Identity = 201/227 (88.55%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI               
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKYVTAGGK+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN
Sbjct: 61  ---GVDFKVKYVTAGGKRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LSEVWA+EIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRV
Sbjct: 121 LSEVWAKEIDLYSTNQDCIKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NVQQCFEELVLKIL+TPSLLSEGSKGVR+NIFKEKPPQPDAS SSCC
Sbjct: 181 NVQQCFEELVLKILETPSLLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of CcUC02G017580 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-94
Identity = 171/227 (75.33%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTI               
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LS++WA+EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRV
Sbjct: 121 LSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CcUC02G017580 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-94
Identity = 171/227 (75.33%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTI               
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LS++WA+EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRV
Sbjct: 121 LSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CcUC02G017580 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-94
Identity = 171/227 (75.33%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTI               
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFKVKY+T G KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTN
Sbjct: 61  ---GVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           LS++WA+EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRV
Sbjct: 121 LSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRV 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 NVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CcUC02G017580 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-81
Identity = 145/227 (63.88%), Postives = 177/227 (77.97%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTI               
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFK+K +T GGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTN
Sbjct: 61  ---GVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           L +VW +EI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR 
Sbjct: 121 LVDVWGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQ 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV+QCFEEL LKI++ PSLL EGS  V+RNI K+KP     + S CC
Sbjct: 181 NVEQCFEELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CcUC02G017580 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-71
Identity = 135/227 (59.47%), Postives = 166/227 (73.13%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIVRNAKSLANFYLICL 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTI               
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTI--------------- 60

Query: 61  AMAGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 120
              GVDFK+K +   GK+LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF N
Sbjct: 61  ---GVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLN 120

Query: 121 LSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRV 180
           L+++WA+EI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR 
Sbjct: 121 LADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRE 180

Query: 181 NVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 228
           NV  CFEEL LKI++ PSLL EGS  V+R       P   A    CC
Sbjct: 181 NVNGCFEELALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

The following BLAST results are available for this feature:

BLAST of CcUC02G017580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901438.1	5.7e-110	91.19	ras-related protein RABC1-like [Benincasa hispida]	[more]
XP_022156664.1	1.7e-109	90.75	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_004147350.1	3.1e-108	89.87	ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa...	[more]
XP_008460888.1	1.5e-107	89.43	PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-relat...	[more]
XP_022971628.1	1.3e-106	88.55	ras-related protein RABC1-like [Cucurbita maxima]	[more]

BLAST of CcUC02G017580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	2.9e-93	75.33	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	8.3e-80	63.88	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.6e-70	59.47	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	9.9e-57	57.65	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	3.1e-50	52.11	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of CcUC02G017580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU73	8.0e-110	90.75	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE...	[more]
A0A0A0LQC6	1.5e-108	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1	[more]
A0A5D3BQN6	7.5e-108	89.43	Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDH6	7.5e-108	89.43	ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1	[more]
A0A6J1I7F2	6.3e-107	88.55	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 ...	[more]

BLAST of CcUC02G017580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	2.1e-94	75.33	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	2.1e-94	75.33	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	2.1e-94	75.33	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	5.9e-81	63.88	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.1e-71	59.47	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 171..193 score: 41.29 coord: 136..149 score: 42.87 coord: 72..94 score: 51.16 coord: 14..35 score: 52.76
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..196 e-value: 2.1E-87 score: 306.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..196 e-value: 1.3E-24 score: 97.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..222 e-value: 0.0076 score: -7.4
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 1..227
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..227
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..227 score: 30.660685
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..194 score: 10.118685
None	No IPR available	CDD	cd01863	Rab18	coord: 14..193 e-value: 4.56467E-101 score: 288.055
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..196 e-value: 9.7E-14 score: 55.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..194 e-value: 6.1E-49 score: 165.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..227 score: 17.673355
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 66..188 e-value: 1.5E-20 score: 71.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..227 e-value: 1.1E-60 score: 206.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G017580.1	CcUC02G017580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding