CcUC01G012940 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G012940
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSpermidine synthase 1-like
LocationCicolChr01: 24911439 .. 24918707 (-)
RNA-Seq ExpressionCcUC01G012940
SyntenyCcUC01G012940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTGATGTATCATCAAATGAAAATTCGTTCACATTCATTTTTAAATTCACGTTGATATGCTAAATTCTTCAAAAATGACATTTCAAAATGGTGCCTCTTCTGCTACAAGAGCTCAACTCTTTGTCCCTATCACTCAGACCGACCATAATAAACCTATAAAAATGGTTTCTTTTTCTCCCGCTCAAAACAACGCTCAAAACAACACTCAAAATGGGATCTCTTTTTCTCCTGTTTTTCCAGGTTGCTATGTGGATAGTGCTCCGGGCTATCTGGTTTTTTTTTTTTTTTTTTCTTTTCCCTCCTAACCTATTAAGAGTCAACCTACGATTAACTAAAAGTATATGGACAAAATTATAATAAATCCTTTGTTGTTTTAATTTAAATATATAGAGGAGGCACATGTCTATAAGCTAGAGAATGTCATATTCAAGGGGAAATCCCAGTATCAAGACCTTCTTGTTTTTCAGGTTTTTTTTTTTCATTTTTATTTTTAGTCTATTTTCCTTAAATTAATTGCTATTTTCATTTAATTTTGTTAAGTTTTTGTTTCTTCAATTGAAATTTAGTCACCAACACATGGGAAGGTTGTGATATTGGATGGGTCCCTTCAGCTAGCAGAGAAGATGAGTTTGCTTATCAAGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTCATTTTTTTTCTTCATATCATAACATATCATATGTATATATATAGATTTCAATATCTTATGAGTTAAACTAGCTAATTAGTTTTTTTTTTTTTTTTTCTCATTGGAGGTGGGGATGGAGGGATTCTTCAAGAAATATCTCGACATGCTTGTGTGGAGCAAATCGACATTTGTGATCTCGACAAAATGGTGAACGATGTAAGTTGTACTCTCAAATATCATATATTTTAGATCAAATCAAAAGTTTAGTCCCTAAACTTTTAAATTTGTATCAAAAAGGTCAATAAACTTCAAAATTGTCTAATAAGTCCTCGATCATTCGATTTTGTTCCTAATATGTGCACATTCCTAGACTTTTAAACTTCTCATTTTGTGTCCTATAAAATCTTAAACTTTTTCATTAATTTGTGTCTAATATATTTGGTCTTACTAGAAACAAAAGTTCAAAAATCCAGTTGAAAGTTTTGAAGTTCAATGTCCAATAACCTATTATTAGCTAAATTAAAAGTTTAGGGGAAATTTTTAAAGTTTTAGAGTTCAACAAAATACAGTAACTCAACCTATAATTTAACCTCAGGAACTCATAATTAAGTATGTTTTAAATTTCAATTTTGCATTGTAGAAAGCCTGAAATTAAGAGAGAGGAATATTTAATGAAAATAATTTGTTTTTCCTTAATAATTAATAAAATGGTGTTTGGTTTAGGTTTACGATAAGTATTTCCCAGACGTTGCTATGGAGTACAAGGATCCTCGTGTGAATGTATACATAGGCGACGGTATGAAACATAAAACTACATGTCGTCTGAGGATTGTTGTCGAATTTTGTGTTTGGTGTTGTCTAATTGTTGTAAAGGTTGGTTGTTGTTTTAGGTGTGGCCTTCATCAACTCTGTTCCTCCAGCCACCTATGATGCCATTATAATTGATGCATTTCAGGGCATGGGTATGTTGTTTCGTTTTGTTTTTTTTTTTTTTTTTCTTAACCCACAAAATCTCAAATTAATAATTGTATTAATTTAAATTTTAAATTTAACAATTATCGTGAATAGTTGAAAAAAAATGGAAGTGTGTGAGAAAGTTAAAATTAGTACTTCCGATTTGATAATTATGTATTGCAATTTTAAAATGGTACGAAAATTCATGATTTTATTTAATAACTATTTGATTTTGTTTTTAATATTAAACTTATAAACACTAGTTTCGCATTAATATACATATATATATTTCATTTTTCAAAAATAATATTTTCAAAATTCAAGTCAAGTTTAAAAATATATTTAAGAATTTATTTTTTTTTAAAATCTAATTATGAATTTAATTGTTTGTCCCAAAGAATTAATAAAAACCATTGTAAAAAGTGATTAAAAGAACAAGTAAAAATTTTAAAACCTAAAAAACAAATGATTATCAAACATAGCTTAAAGTTTCAATCTATACAGATATTGTTTTGAAGTTCTAAGTGATACAATTTGGTATAAATTGATTTTTCCCTAACATGAATTGAAAAAAAAGAAATTAGACCCCATTTAATACTTATTTCAATTTTTAGTTTTTCATTTTTAATTTTTTTTAATTAATACTTTCTCCTAATTTTTCAATCAATTATGGTTTTTAACTTGGTTAAAGAAAGTGCTTGAATTCTTAGTCAAAATCTAAAAATAAAAAAATAATAATAAATAAATACATTTAAAACTACCTTTTAAGCCTTATTTAGTTGGTTAAAGAAAGTGCTTGAATTCTTAGTCAAAATTTAAAAATAAAAAATAATAATAAATAAATATATAAATACATTTAAAACTACCTTTTAAGCCTTATTTAGTAACCATTTGACCATTTCGTTTTAATTTTTGAAAACTAAGCTTATAAACACCTCTTCCACTCCTAGATTTCTTGCTTAATTATCTATTTTCTACAAATTTTAAAAAACTAAGTCAAGTTTTGAAAACTAAAAAAATTGTTTTTAAAATTTGACTTAGAATTTAACTCTTTTACTTAAAAAAAAAACACGAACTAATCCTAGACAATAAATAGATTTAAAAAAAAAAAAAAATAAAATCTGACAACCGAACAGTACCAATCATGATATTTGTTTTCACTATACAAAGTGAAGTTAAAACCTATATAATTGAATATGGATATCAGGGGCTTATGCAACAGAGCTTTCAAATGAAGCCTTACTTAAATCAATAGCAAAGGCTTTGAAGCCCGGCGGGGTAATGTCAACTCCGGCGGACAGCATATGGCTCCACAATTTCGCCATGGAAGATACCATAACTCTCTGTCGTGACATATTCAAAGGCTCTGTAAACTATGCTTGGACCTCTGTTCCTTCATATCCAAGGCAAACCCAACCACAACCATTTAAAGCTTTGTTTCATTTCCAAAATTCTTTACTTTTATGCTTCTGCACAATCTGGAGTTCTCTCTAATGCCTTTCTTTCCCCTGCTAAATGATCCAAACTCACTGGCGCAATGGGTTCATGCTCTGTTAAACCGACGGTCCATCAGTCGACTTCAAACAGCCAGTGAACCTGTTGGATCCAGAAAATTTTGGTGTTGCAAAAGGACCCCCCAAGTTCTACAACTCTGAGGTGGTTTCTTCTTTCTTTTGCTCACATATGTTCATAAGCCTACTCTATTGCCCCTTCTATGATCTAACTAATTGGCTGTTTAACTCTGCTGTTTAGATCCATACTGCTGCGTTTTGTCTTCCTGCATTCGCAAAGTTGGCAATGGGTTCCAAATATGCACGAGAAAGTCAGAATCATATGTATGCGAACAAGACTAAAGTCTAGCAAATCCAGTGGTTTCTCAACTGTAGGCTGTAATGTCAAAGTGGGAAAAGGGAACTGTTGTCAATCGAGACTTTTCTAATATAAATGAATATCTCATCTATCACAATGGGAGATGTTTGATTTCGAGATCTTTTGGTTGCATGGACTTTATACAAAGATAATGAGGTAGAGAAAAATAGACAACCAGAAACACTAAAACTCCAAGGTCGGCTTCTTCACCGACAGCTGGTCGACGAGGGCTAGCCCAGTATATCTGGCTTGCACACCACATGGAATATAGGGTAGCTACAACTACGATAAGCTTTACCGACTGATACGATTGTTCTGACATCGACTTTGCAGACTTCACTCTGTCTCATAAAAGAAGCATGAATGGTATAAGGGCATGCTAAAGATTAAGAAAAAAAAACTCAAATGGCACACGGAGTATAATTGGTATTTAAGAACCTATTAATGTATACAAAGCCGCCGATTAAGCAAGTGCACAAGAATCCAACAACGAGAACAGCATCTGGATTAATTGGCGCTCGGTTCTCCCACCAACCAGTGCTCAATATCCAAGTATACATTGACGAATGCCCATTTTCCTGCAAATTTGGCGATAGAGATATAATAGTACAACCCATCTTGTTTAATTATAAAAGTTTCTGAGCAATATAAAACAGGAAAGAACAATCCCACTCCATACAACCATGACTTAAAGAAAGTTGAACATTGACAAACTGATTTATCAAAGACAAGATATATCAGTTGTACTTCCCATCTCATCGTGAACGATTTTCAACTAACTTGTTAAAACAACAAAGATCTCGAACACCATTAACCAGATAGTAACATTTATTTTCCCTTGCACCCTCCTAGAAAATAAGAAAACTTCTATTTGAACACTCGTCACATCTCTTCACGGAAGGTGCTTTACCAGAGGAGATGCTTAGTTTAGCAGCATTATGTTAGGATACCACCTAACGAGAAAATTCAAAGAAACACAAAGAACACAAGGATCGGAATATATTGCAATATGAAGAGAAGTTATAATATACTAATAGTAGTAAGTCTTTTGATCTCTTTCTCAAAGTCCCACAATCAAAACTTTCAACAAAATGAACCACACACCCTAAGGTGTCCAACTCCTTTTATTTATAACTAAAACACCACTAGTTAATAACCCAAAGTACCTCTAACTAATATCCTATTGGAACAACTACTCTGATTGACAGCAGCAAACAGCACGAACTGCAACCGTCAGTAACGAATGACCCGAACAGACCCTGCAAAACAGAAAATTGTGATAGGCTGAGTCGCAGAGCTCGCTCTCTTTAAGACGTTTTGCGGCTTTGCTAGAGTGCAAGCAGTTCTTCAAGATACCACGTCGTCCCCAGGATAAAACAACCTTTAACGGTCAACCGAACTTGCACCTAGATCGGTTGATAATGCTAACTCCCTTCTAATAATTTGCTCGAAAACTAAATTATTTTTAGAAAGAAGATTTTTATGAAGGAGAGTTGGGAGACAAAGGTGTAGGAAGGGAAGATGAGAAGAAGAAGTGAGGGGATGAGGCACTATATATAGTGCTGGTGACCAATATGCACTACTTCCTCCCAACCCGACACGTGGCAGTATGCAGTCCAGAGAACGTGTAGGTACGTCTAGGAGGGGAACCTGACGACTAATCTCAATCTGACATGTGGAATCACTTTGTTGACTGTTCTCGACCGAACACATGGACAGAGGTTTAAAATAACCGATGTGGGAGTTAATTAAGGAAAAAGATTTTCTCTACAAAAATTTTATTGCTGGTGGAAAATTTTGTTTTGAAGAAAGAAGTTTTGTTTTTTTAAGAATCCCACATCAGTTATTTTATGAGTGGTACTCCTCTTTATTAACTCCCTCTTACCCTTTTGGCTTTGGGACCAACGGGGAACCCGAGTTCTAGAAAGGGTGAGGAGATAGGCCAAGCTGGGCTTATCATGATCTTCACAAGAAAGAATTTTTATTTAACACTTTTTTAAAACCTCTGTCCACGTGTTCAGTCGAGAACAGTCAACAAAGTGATTCCACGTGTCAGGTTGAGATTAGTCGTCGGGTTCCCTCCTAGACAGTGCACGTTCTCTGGACTGCCATGTATCGGGCTGGGAGGAAGTAGTGCATCTAACCGTTGGTCATCAGCACTATTTATACTACCTCCCGCTTGCTTCTTCCTCAGTTTTTTCTTCTCATCTTCACTTCCCACATCTTTGTCTCCCAACTCTCCTTCACAAAAATCCTCTTTCCAAAAATAATTTATTTTATTCACATTTCCGAGAAAATTATTAGAAGGGTGATAGTATTATCAACCGATCTAGGGGGAAGTTCAGTTGTCCGTTAAAGACCATTTTATCCTGGGAACGACGTGGTATTTTGAAGAACTGTTTGCACTCTAACAGCACCGCGAAACGTCTTAAAGAGAGCGAGCTCCGCGACTCAGCCTATCACAAGTTTCTATTTTGCAGGGTTTGTTCGGGTCATTTGTTACTGACGGTTGCAGTTTGTGTTGTTTGCTGCTGTCAATCAGAAAAGCTGTTCTAACAATTTTAAGACATCATAACCGCTGCTGTGATAGTACTGTCAACCCAAAACGACATCATGTCCTCTGATCTCAATCGTCCTTTCCGTTTTGTAGGGGCGAATTTCCAACAGTAGAAACAAAAGATGTTGTTCTTCCTGACGGTCAAGAAAGTAGTTGTTCCAACATATCCTATTCATCTTACCCATGTACCACTAAGTAGTATTGTCACACATTATTATACCCAGCAAGAATATTTATTTTTCAAAATGATCAAAGAACTTACCGAGGCAGAAAGCTTGGTGATGGGGCAATTTAAATTCTTGATGATGTAAAGCTTACCTCAAACAAATGGTCAAGAAAGAAGTGTGAGAAAGAACCAGCAGAGATTAACAACAAGCATTGCCTTCTATTAAGAGATACCTACATCATTAGAGCAAAATGAACAAGGATGAAGATTAAATCTCTCGGACAATCTTCTAAAAGATGGCAATATTTTCCATTTCTTTTCCCTAGAAGCAGCATATTCATAAATGCGTTAATCGAAGAAAGTAAAGAGTAATATTTCACAGCACAATTTCAAACCATAAGATAAAAGCAAAAAACCACATCGTTCTAACAAATTCATCATCATGCTTGCAATCAATCGACGCGAGAGCATAACTTAATAATCATCTTACAACAAAGAAAACCAAATATAATCAATCACAAAAAAATCGAGAGACCCAATTACGTCATCCACACAATTCTGCAGATTCAAGTAACAAACAGCAAATACAATGATCCAAAAATGGAACACAGAATTTCTAAATCTGCCAATCGTGGAGTGAATTGACTCACCCCAAAGACGGAATCGAGGAGGCCCTTGTGGAGTAGAAAAGAGGAGAGCCAGGAGTAGAAGAGGCAGAGAGGAAGACCCAGAATGAGGATGTAGAAGAGGGGATGATGGATTGCGTCGGGAAGGGAAGATGCTGAGAAACCGAGAACGGAGGAGAGCCAATCGGAGAAGGAGCCGATGTCGGGGCCGAAGAAGGCGTTGAGGGTGTAAACGAGGGTATGGTGGGGGCTGAATCGACCGTCGGTGAGAGTGGTCAGAGCCATGCCTGAGCCCATGGCGTAGAGCATGTGAGGCCCAGGTCCAGGCATGGTTCCGTCTCAACGATCGAAGTCGCAATCGCAACCCAAGTTTCCGATCTCAATACACAGTAGTGTCGAAGGGAACGGAAGCTATTAACTTGATG

mRNA sequence

CATTTGATGTATCATCAAATGAAAATTCGTTCACATTCATTTTTAAATTCACGTTGATATGCTAAATTCTTCAAAAATGACATTTCAAAATGGTGCCTCTTCTGCTACAAGAGCTCAACTCTTTGTCCCTATCACTCAGACCGACCATAATAAACCTATAAAAATGGTTTCTTTTTCTCCCGCTCAAAACAACGCTCAAAACAACACTCAAAATGGGATCTCTTTTTCTCCTGTTTTTCCAGTCACCAACACATGGGAAGGTTGTGATATTGGATGGGTCCCTTCAGCTAGCAGAGAAGATGAGTTTGCTTATCAAGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACGATAAGTATTTCCCAGACGTTGCTATGGAGTACAAGGATCCTCGTGTGAATGTATACATAGGCGACGGTGTGGCCTTCATCAACTCTGTTCCTCCAGCCACCTATGATGCCATTATAATTGATGCATTTCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGCCTTACTTAAATCAATAGCAAAGGCTTTGAAGCCCGGCGGGGTAATGTCAACTCCGGCGGACAGCATATGGCTCCACAATTTCGCCATGGAAGATACCATAACTCTCTGTCGTGACATATTCAAAGGCTCTATCCATACTGCTGCGTTTTGTCTTCCTGCATTCGCAAAGTTGGCAATGGGTTCCAAATATGCACGAGAAAGTCAGAATCATATGTATGCGAACAAGACTAAAGTCTAGCAAATCCAGTGGTTTCTCAACTGTAGGCTGTAATGTCAAAGTGGGAAAAGGGAACTGTTGTCAATCGAGACTTTTCTAATATAAATGAATATCTCATCTATCACAATGGGAGATGTTTGATTTCGAGATCTTTTGGTTGCATGGACTTTATACAAAGATAATGAGGTAGAGAAAAATAGACAACCAGAAACACTAAAACTCCAAGGTCGGCTTCTTCACCGACAGCTGGTCGACGAGGGCTAGCCCAGTATATCTGGCTTGCACACCACATGGAATATAGGGTAGCTACAACTACGATAAGCTTTACCGACTGATACGATTGTTCTGACATCGACTTTGCAGACTTCACTCTGTCTCATAAAAGAAGCATGAATGGTATAAGGGCATGCTAAAGATTAAGAAAAAAAAACTCAAATGGCACACGGAGTATAATTGGTATTTAAGAACCTATTAATGTATACAAAGCCGCCGATTAAGCAAGTGCACAAGAATCCAACAACGAGAACAGCATCTGGATTAATTGGCGCTCGGTTCTCCCACCAACCAGTGCTCAATATCCAAGTATACATTGACGAATGCCCATTTTCCTCAAACAAATGGTCAAGAAAGAAGTGTGAGAAAGAACCAGCAGAGATTAACAACAAGCATTGCCTTCTATTAAGAGATACCCCAAAGACGGAATCGAGGAGGCCCTTGTGGAGTAGAAAAGAGGAGAGCCAGGAGTAGAAGAGGCAGAGAGGAAGACCCAGAATGAGGATGTAGAAGAGGGGATGATGGATTGCGTCGGGAAGGGAAGATGCTGAGAAACCGAGAACGGAGGAGAGCCAATCGGAGAAGGAGCCGATGTCGGGGCCGAAGAAGGCGTTGAGGGTGTAAACGAGGGTATGGTGGGGGCTGAATCGACCGTCGGTGAGAGTGGTCAGAGCCATGCCTGAGCCCATGGCGTAGAGCATGTGAGGCCCAGGTCCAGGCATGGTTCCGTCTCAACGATCGAAGTCGCAATCGCAACCCAAGTTTCCGATCTCAATACACAGTAGTGTCGAAGGGAACGGAAGCTATTAACTTGATG

Coding sequence (CDS)

ATGCTAAATTCTTCAAAAATGACATTTCAAAATGGTGCCTCTTCTGCTACAAGAGCTCAACTCTTTGTCCCTATCACTCAGACCGACCATAATAAACCTATAAAAATGGTTTCTTTTTCTCCCGCTCAAAACAACGCTCAAAACAACACTCAAAATGGGATCTCTTTTTCTCCTGTTTTTCCAGTCACCAACACATGGGAAGGTTGTGATATTGGATGGGTCCCTTCAGCTAGCAGAGAAGATGAGTTTGCTTATCAAGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACGATAAGTATTTCCCAGACGTTGCTATGGAGTACAAGGATCCTCGTGTGAATGTATACATAGGCGACGGTGTGGCCTTCATCAACTCTGTTCCTCCAGCCACCTATGATGCCATTATAATTGATGCATTTCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGCCTTACTTAAATCAATAGCAAAGGCTTTGAAGCCCGGCGGGGTAATGTCAACTCCGGCGGACAGCATATGGCTCCACAATTTCGCCATGGAAGATACCATAACTCTCTGTCGTGACATATTCAAAGGCTCTATCCATACTGCTGCGTTTTGTCTTCCTGCATTCGCAAAGTTGGCAATGGGTTCCAAATATGCACGAGAAAGTCAGAATCATATGTATGCGAACAAGACTAAAGTCTAG

Protein sequence

MLNSSKMTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVPSASREDEFAYQEMLTHLPLCSIPNPKKVYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMGSKYARESQNHMYANKTKV
Homology
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BLAST of CcUC01G012940 vs. NCBI nr
Match: XP_038893662.1 (spermidine synthase 2-like [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-70
Identity = 171/355 (48.17%), Postives = 185/355 (52.11%), Query Frame = 0 

Query: 7   MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNG----ISFSPVFPV 66
           MTFQNG SS+T+AQL VP   TDHN+ +K++SFSP QN   N TQNG     SFSPVFP 
Sbjct: 1   MTFQNGVSSSTKAQLHVPTIGTDHNELVKIISFSPIQNGTHNGTQNGAQNETSFSPVFP- 60

Query: 67  TNTWEGCDIGWVP-------------------------------------------SASR 126
                GC +   P                                             + 
Sbjct: 61  -----GCYVDIAPCYPEEAHVYKLEKVIFKGKSQYQDLFVFQSPTHGKVVILDGSLQLTE 120

Query: 127 EDEFAYQEMLTHLPLCSIPNPKK-----------------------------------VY 186
           +DEFAYQEMLTHLPLCSIPNPKK                                   VY
Sbjct: 121 KDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEHIDICDLDKMVIDVY 180

Query: 187 DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLK 225
            +YFPD+A+ YKDPRVNV IGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE LLK
Sbjct: 181 KRYFPDIAIGYKDPRVNVCIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDLLK 240

[Close]
BLAST of CcUC01G012940 vs. NCBI nr
Match: TYJ99147.1 (spermidine synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-68
Identity = 160/319 (50.16%), Postives = 179/319 (56.11%), Query Frame = 0 

Query: 7   MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNT 66
           M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP    
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP---- 60

Query: 67  WEGCDIGWVP-------------------------------------------SASREDE 126
             GC +   P                                             + +DE
Sbjct: 61  --GCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE 120

Query: 127 FAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKY 186
           FAYQEMLTHLPLCSIPNPKK                                   VY K+
Sbjct: 121 FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKH 180

Query: 187 FPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIA 226
           FPD+A+ YKDPRVN YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIA
Sbjct: 181 FPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIA 240

[Close]
BLAST of CcUC01G012940 vs. NCBI nr
Match: KAA0055218.1 (spermidine synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-68
Identity = 160/313 (51.12%), Postives = 178/313 (56.87%), Query Frame = 0 

Query: 7   MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNT 66
           M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP    
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP---- 60

Query: 67  WEGCDIGWVP-------------------------------------SASREDEFAYQEM 126
             GC +   P                                       + +DEFAYQEM
Sbjct: 61  --GCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQVVILDGSLQLTEKDEFAYQEM 120

Query: 127 LTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAM 186
           LTHLPLCSI NPKK                                   VY K+FPD+A+
Sbjct: 121 LTHLPLCSILNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 187 EYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPG 226
            YKDPRVN YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

[Close]
BLAST of CcUC01G012940 vs. NCBI nr
Match: XP_008446082.2 (PREDICTED: spermidine synthase 1-like [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 5.0e-64
Identity = 157/338 (46.45%), Postives = 174/338 (51.48%), Query Frame = 0 

Query: 21  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP----- 80
           L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P     
Sbjct: 2   LHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP------GCYVDIAPFYPEQ 61

Query: 81  --------------------------------------SASREDEFAYQEMLTHLPLCSI 140
                                                   + +DEFAYQEMLTHLPLCSI
Sbjct: 62  GHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSI 121

Query: 141 PNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNV 200
           PNPKK                                   VY K+FPD+A+ YKDPRVN 
Sbjct: 122 PNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNS 181

Query: 201 YIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADS 226
           YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADS
Sbjct: 182 YIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADS 241

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BLAST of CcUC01G012940 vs. NCBI nr
Match: KAG7019827.1 (hypothetical protein SDJN02_18791, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-56
Identity = 117/183 (63.93%), Postives = 131/183 (71.58%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKK----------------------------------- 137
           + +DE +YQEMLTHLPLCSIPNPKK                                   
Sbjct: 87  TEKDECSYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIDICELDEMVIN 146

Query: 138 VYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
           VY ++FPD+A+ Y DPRVNV+IGDGVAFI SVPP TYDAIIIDAF+GMGAYATELS+E  
Sbjct: 147 VYKEFFPDIAIGYVDPRVNVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDF 206

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMGS 226
           LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSIHTAAFCLPAFAK  MGS
Sbjct: 207 LKSIAKALKPGGVLSAQADSVWIENFTMEDTITRCRNIFKGSIHTAAFCLPAFAKSKMGS 266

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BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match: Q9ZS45 (Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35
Identity = 80/179 (44.69%), Postives = 107/179 (59.78%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSIPNPKKV                                  
Sbjct: 106 TERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVE 165

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FPDVA+ Y+DPRVN++IGDGVAF+ +VP  TYDA+I+D+   +G  A EL  +  
Sbjct: 166 VAKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGP-AQELFEKPF 225

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +SIAKAL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Sbjct: 226 FESIAKALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIG 283

[Close]
BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match: Q96557 (Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35
Identity = 82/198 (41.41%), Postives = 114/198 (57.58%), Query Frame = 0 

Query: 59  VFPVTNTWEGCDIGWVPSASREDEFAYQEMLTHLPLCSIPNPKKVY-------------- 118
           VF  T   +   +  V   +  DE AYQEM+THLPLCSIPNPKKV               
Sbjct: 62  VFQSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVS 121

Query: 119 ---------------------DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAII 178
                                 ++FPDVA+ Y+DPRVN++IGDGVAF+ +VP  TYDA+I
Sbjct: 122 RHSSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVI 181

Query: 179 IDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKG 222
           +D+   +G  A EL  +   ++IA+AL+PGGV+ST A+SIWLH   +E+ +  CR+IFKG
Sbjct: 182 VDSSDPIGP-AQELFEKPFFETIARALRPGGVVSTQAESIWLHMHIIEEIVANCREIFKG 241

[Close]
BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match: O48658 (Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35
Identity = 79/179 (44.13%), Postives = 107/179 (59.78%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSIPNPKKV                                  
Sbjct: 79  TERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVE 138

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FPDVA+ Y+DPRVN++IGDGVAF+ +VP  TYDA+I+D+   +G  A EL  +  
Sbjct: 139 VAKEFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGP-AQELFEKPF 198

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +SIA+AL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Sbjct: 199 FESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIG 256

[Close]
BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match: O48660 (Spermidine synthase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34
Identity = 77/179 (43.02%), Postives = 105/179 (58.66%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+ HLPLCSIPNPKKV                                  
Sbjct: 77  TERDECAYQEMIAHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVE 136

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FPDVA+ Y+DPRVN++IGDGVAF+ +V   TYDA+I+D+   +G  A EL  +  
Sbjct: 137 VSKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVAAGTYDAVIVDSSDPIGP-AQELFEKPF 196

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +SIA+AL+PGGV+ST A+SIWLH   +E+ +  CR IFKGS++ A   +P +    +G
Sbjct: 197 FESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIG 254

[Close]
BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match: O48659 (Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-33
Identity = 75/179 (41.90%), Postives = 105/179 (58.66%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSIPNPKKV                                  
Sbjct: 71  TERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVID 130

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FP+VA+ Y+DPRV +++GDGVAF+ +VP  TYDA+I+D+   +G  A EL  +  
Sbjct: 131 VSKQFFPNVAIGYEDPRVKLHVGDGVAFLKNVPEGTYDAVIVDSSDPIGP-AQELFEKPF 190

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +S+A+AL PGGV+ T A+SIWLH   +ED ++ CR IFKGS++ A   +P +    +G
Sbjct: 191 FESVARALCPGGVVCTQAESIWLHMHIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGVIG 248

[Close]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match: A0A5A7UJN5 (Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00590 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 7.2e-69
Identity = 160/313 (51.12%), Postives = 178/313 (56.87%), Query Frame = 0 

Query: 7   MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNT 66
           M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP    
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP---- 60

Query: 67  WEGCDIGWVP-------------------------------------SASREDEFAYQEM 126
             GC +   P                                       + +DEFAYQEM
Sbjct: 61  --GCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQVVILDGSLQLTEKDEFAYQEM 120

Query: 127 LTHLPLCSIPNPKK-----------------------------------VYDKYFPDVAM 186
           LTHLPLCSI NPKK                                   VY K+FPD+A+
Sbjct: 121 LTHLPLCSILNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 187 EYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPG 226
            YKDPRVN YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

[Close]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match: A0A5D3BJ52 (Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003540 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 7.2e-69
Identity = 160/319 (50.16%), Postives = 179/319 (56.11%), Query Frame = 0 

Query: 7   MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNT 66
           M FQNG SS+  +A L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP    
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP---- 60

Query: 67  WEGCDIGWVP-------------------------------------------SASREDE 126
             GC +   P                                             + +DE
Sbjct: 61  --GCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE 120

Query: 127 FAYQEMLTHLPLCSIPNPKK-----------------------------------VYDKY 186
           FAYQEMLTHLPLCSIPNPKK                                   VY K+
Sbjct: 121 FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKH 180

Query: 187 FPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIA 226
           FPD+A+ YKDPRVN YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIA
Sbjct: 181 FPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIA 240

[Close]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match: A0A1S3BF22 (spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.4e-64
Identity = 157/338 (46.45%), Postives = 174/338 (51.48%), Query Frame = 0 

Query: 21  LFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNTWEGCDIGWVP----- 80
           L VP  +T+ N+PI+++SFSP QN  QN  Q+G SFSPVFP      GC +   P     
Sbjct: 2   LHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFP------GCYVDIAPFYPEQ 61

Query: 81  --------------------------------------SASREDEFAYQEMLTHLPLCSI 140
                                                   + +DEFAYQEMLTHLPLCSI
Sbjct: 62  GHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSI 121

Query: 141 PNPKK-----------------------------------VYDKYFPDVAMEYKDPRVNV 200
           PNPKK                                   VY K+FPD+A+ YKDPRVN 
Sbjct: 122 PNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNS 181

Query: 201 YIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADS 226
           YIGDGVAFI SVPPATYDAIIIDAFQGMGAYATELSNE +LKSIAKALKPGGVMS PADS
Sbjct: 182 YIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADS 241

[Close]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match: A0A0A0LQV4 (PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045980 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 131/262 (50.00%), Postives = 159/262 (60.69%), Query Frame = 0 

Query: 7   MTFQNGASSA-TRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFPVTNT 66
           MTFQNG SS+  +A L  P  +T+HN+PI+++SFSP     QN TQNG SFSP FP    
Sbjct: 1   MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSP----IQNGTQNGDSFSPAFP---- 60

Query: 67  WEGCDIGWVP------------------SASREDEFAYQEML------------------ 126
             GC +   P                   +  +D F +Q                     
Sbjct: 61  --GCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSCSLEEEME 120

Query: 127 ----THLPLCSIPNP----------KKVYDKYFPDVAMEYKDPRVNVYIGDGVAFINSVP 186
                HL + ++               VY K+FP++A+ YKDPRVN YIGDGVAFI SVP
Sbjct: 121 GFFEKHLDMLALSKSTFVISTRWWLMSVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVP 180

Query: 187 PATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGGVMSTPADSIWLHNFAMEDTIT 218
           PATYDAIIIDAFQGMG YA ELSNE LLKSIAKALKPGGV+STPADSIWL+NFAMEDTIT
Sbjct: 181 PATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTIT 240

[Close]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match: A0A6J1C7X6 (spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 148/346 (42.77%), Postives = 170/346 (49.13%), Query Frame = 0 

Query: 7   MTFQNGASSATRAQLFVPITQTDHNKPIKMVSFSPAQNNAQNNTQNGISFSPVFP----- 66
           M FQ G SS+        +    H  P+ +VS +  QN   N  QN  S SPVFP     
Sbjct: 1   MAFQTGLSSSF-------LESHLHVTPVNVVSQNVTQNG--NGIQNSASLSPVFPGYYAD 60

Query: 67  VTNTW------------------EGCDIGWVPSA--------------SREDEFAYQEML 126
           +  +W                  +  D+    +A              + +DEFAYQEML
Sbjct: 61  LAPSWPEEAHVYKIEKIIFQEKSQYQDLFVFQTATHGKVVILDGSLQLTEKDEFAYQEML 120

Query: 127 THLPLCSIPNPKK-----------------------------------VYDKYFPDVAME 186
           THLPLCSIPNPKK                                   VY K+FPD+A+ 
Sbjct: 121 THLPLCSIPNPKKVLLIGGGDGGILREVSRHSSVEHIDICDLDKMVIDVYKKFFPDIAVG 180

Query: 187 YKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEALLKSIAKALKPGG 226
           Y+DPRVNV IGDG AFI S+PP TYDAII+DAFQGMGAYATELS++  L+SIAKALKPGG
Sbjct: 181 YEDPRVNVTIGDGAAFIKSIPPGTYDAIILDAFQGMGAYATELSDKDFLESIAKALKPGG 240

[Close]
BLAST of CcUC01G012940 vs. TAIR 10
Match: AT1G23820.1 (spermidine synthase 1 )

HSP 1 Score: 142.5 bits (358), Expect = 4.4e-34
Identity = 74/179 (41.34%), Postives = 105/179 (58.66%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSIPNPKKV                                  
Sbjct: 143 TERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVD 202

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FPDVA+ Y+DPRVN+ IGDGVAF+ +    +YDA+I+D+   +G  A EL  +  
Sbjct: 203 VSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP-AKELFEKPF 262

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +S+A+AL+PGGV+ T A+S+WLH   +ED ++ CR+IFKGS++ A   +P +    +G
Sbjct: 263 FQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIG 320

[Close]
BLAST of CcUC01G012940 vs. TAIR 10
Match: AT1G23820.2 (spermidine synthase 1 )

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-34
Identity = 73/175 (41.71%), Postives = 104/175 (59.43%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSIPNPKKV                                  
Sbjct: 143 TERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVD 202

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              ++FPDVA+ Y+DPRVN+ IGDGVAF+ +    +YDA+I+D+   +G  A EL  +  
Sbjct: 203 VSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP-AKELFEKPF 262

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAK 218
            +S+A+AL+PGGV+ T A+S+WLH   +ED ++ CR+IFKGS++ A   +P + +
Sbjct: 263 FQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPR 316

[Close]
BLAST of CcUC01G012940 vs. TAIR 10
Match: AT1G70310.1 (spermidine synthase 2 )

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-33
Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           +  DE AYQEM+THLPLCSI NPKKV                                  
Sbjct: 103 TERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVD 162

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              +YFP+VA+ Y+DPRVN+ IGDGVAF+ +    TYDA+I+D+   +G  A EL  +  
Sbjct: 163 VAKQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGP-AKELFEKPF 222

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +S+ +AL+PGGV+ T A+S+WLH   +ED ++ CRDIFKGS++ A   +P +    +G
Sbjct: 223 FESVNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIG 280

[Close]
BLAST of CcUC01G012940 vs. TAIR 10
Match: AT5G53120.1 (spermidine synthase 3 )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 64/179 (35.75%), Postives = 94/179 (52.51%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           + +DE AYQEM+ HLPLCSI +PK V                                  
Sbjct: 122 TEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVID 181

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              K+FP++A+ + DPRV ++IGD   F+   P   YDAII+D+   +G  A  L  +  
Sbjct: 182 VSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPF 241

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +++A+ALKPGGV+   A+S+WLH   +ED I++CR  FK S+H A   +P +    +G
Sbjct: 242 FETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIG 298

[Close]
BLAST of CcUC01G012940 vs. TAIR 10
Match: AT5G53120.2 (spermidine synthase 3 )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 64/179 (35.75%), Postives = 94/179 (52.51%), Query Frame = 0 

Query: 78  SREDEFAYQEMLTHLPLCSIPNPKKVY--------------------------------- 137
           + +DE AYQEM+ HLPLCSI +PK V                                  
Sbjct: 122 TEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVID 181

Query: 138 --DKYFPDVAMEYKDPRVNVYIGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEAL 197
              K+FP++A+ + DPRV ++IGD   F+   P   YDAII+D+   +G  A  L  +  
Sbjct: 182 VSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPF 241

Query: 198 LKSIAKALKPGGVMSTPADSIWLHNFAMEDTITLCRDIFKGSIHTAAFCLPAFAKLAMG 222
            +++A+ALKPGGV+   A+S+WLH   +ED I++CR  FK S+H A   +P +    +G
Sbjct: 242 FETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIG 298

The following BLAST results are available for this feature:
BLAST of CcUC01G012940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893662.11.2e-7048.17spermidine synthase 2-like [Benincasa hispida][more]
TYJ99147.11.5e-6850.16spermidine synthase 1-like [Cucumis melo var. makuwa][more]
KAA0055218.11.5e-6851.12spermidine synthase 1-like [Cucumis melo var. makuwa][more]
XP_008446082.25.0e-6446.45PREDICTED: spermidine synthase 1-like [Cucumis melo][more]
KAG7019827.12.2e-5663.93hypothetical protein SDJN02_18791, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CcUC01G012940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZS451.0e-3544.69Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1[more]
Q965571.7e-3541.41Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1[more]
O486582.3e-3544.13Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1[more]
O486607.3e-3443.02Spermidine synthase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1[more]
O486592.1e-3341.90Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1[more]
BLAST of CcUC01G012940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UJN57.2e-6951.12Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A5D3BJ527.2e-6950.16Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BF222.4e-6446.45spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1[more]
A0A0A0LQV41.6e-5550.00PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045980 PE=3 S... [more]
A0A6J1C7X62.3e-5442.77spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 S... [more]
BLAST of CcUC01G012940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G23820.14.4e-3441.34spermidine synthase 1 [more]
AT1G23820.25.7e-3441.71spermidine synthase 1 [more]
AT1G70310.12.8e-3341.34spermidine synthase 2 [more]
AT5G53120.12.6e-2635.75spermidine synthase 3 [more]
AT5G53120.22.6e-2635.75spermidine synthase 3 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01564Spermine_synthcoord: 105..228
e-value: 3.3E-18
score: 65.8
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 104..225
e-value: 2.6E-26
score: 94.5
coord: 78..103
e-value: 1.9E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR11558:SF28SYNTHASE 1, PUTATIVE-RELATEDcoord: 103..221
coord: 79..103
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 106..176
e-value: 0.00528324
score: 33.5575
IPR001045Spermidine/spermine synthasesPANTHERPTHR11558SPERMIDINE/SPERMINE SYNTHASEcoord: 103..221
coord: 79..103
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 106..227
score: 14.174007
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 72..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G012940.1CcUC01G012940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016740 transferase activity
molecular_function GO:0003824 catalytic activity