CcUC01G011010 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G011010
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	PsbP domain-containing protein
Location	CicolChr01: 16999613 .. 17003330 (-)
RNA-Seq Expression	CcUC01G011010
Synteny	CcUC01G011010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATCCTAAAAATCTGAAAACAGAAGTTAGTGTTGTGCTTGGAGAGATTCCTGAAAATGGCTGTGATCCTCGACTCCTTCTTACCTCCAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCCATCACTTCTCCTTCTCCGCGATGGCCTATGGATTCATCCCACAAATGTCGCTCTGAATCTCAATCGGTAATTCTTCCAAAATCACTTCACAAATTGTAATCAATCTGGAACTTGTTACTTGCATTTATCGCTATAGCTTTCTAATATATAATCAGATTAAAGCCGTTGCAGTTCCAAGGAGGAATGCAATGGCGTTGATCTTCTCCACTTGTATTTTCTCGAATTCTGCGTTGGCTGAGCCATCTCCATCTCCATCTCCATCTCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCTTCCAGCTATAAGAGCGTTCAGGATTTAGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACTGAGTTCATGTCTACGAGGCTTGGGGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAAAATGGCAGATGATGGAAGAACTTACTACCAAGTTGAGGTAATTTGTGACTGTATATACACAACTTTGATTCAATTCTACTTTATCTTTTTCTGCATCCATTATGGTGAACAACTTCTTCTTCATCTGCTCATTTGGTTATGAATGTTTAGGTTCATTTTGATTTTGGATTTTTGTTTCTAAAATTAAGTCTAGACTCCATTTCCATTCCATTCATTGGTCTACATCTCAAGACTGTTTTCAAAATTAAAACTAAAATTTGAAAACTAAAAGAAATTTTTAAAAACTTTTTTTTTTTTAAATTGTAAGAATTCAAATGCTTATATAGAAAATACAAAAATTATGAGTAGAAAAAATTTCAAAAACCAAAAATAAAAAACCAAATGGTTACTAACCAAAATCTTAGCATCTCAACTTCAACTTTCACCTTTGTGTCAAATAAGTTCCTTGATTTTGAAAGGTAACAATGGGTTCTCAAACGTCAATGTTGTATCTAGTAGGTTATTAAAAGATCAAAAACCTAGTTAAACATTTTTAAAATGTAGGAACTTAATAAGGAATCTTGAAAGTTTAAGGGCCTGATAAATACCTTTTAAAATGAAAAGATTTATTGAAACTTGTAGTTCAATGAAAAAAGTTGCCTTTTGGTCAGTGTATAATGGCTCTTCCCTGAATCTGTTTAAAATAACCCTTTTGGGTGTTTTTGACCACAGAAATCATTAGCCATGAACCTTAGTAATAAGCAATGGAAAACCATAATGGTGTAAGAGGAACATTCCGAAGATTGTTGTTTGTTGTGAGTTGTGACATTCTAGTTTTCTTTATAGGTACCTATGTGATGTATGATGTTAAGCATTTCATATTTTTCTCTGCAACTCTGAATTGAACTAACCCATAAGTTATAAGTTCAAGTTAATCTTAATGTCACTTTAGCTTCTTTGATCTCCATTTCTTCAAATGCATCATAACAATCTGCAATCTTACGATTATGTGGGTATCAGGTAAACATAAAGTCATATGCAAACAACAATGAACTGGCAGTAATGCCACAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTCTCGGTTCTTGGAGTCGAAAACAGTCGGCTATATGAATTGAGATTACAAACTCCAGAAAACGTGTTCGTAGAAGAAGAAAATGAGTTGCGTCAAGTTATGGATTCTTTCAGAGTCAACAAAGTGAATGCGTGAAATGAATTGTTGCAGCCGAGGGTTTTCAGATGTAGTAGCTGAAACATTGTACTTTTCATCATCAAAGCAAATTGATTCTGCATTTTACAGTTTGATATTGGAGTCCTGTCTCACTAATCTAATATTTCTTGATTCCTTGATTAAGTAAAAGTGCACCAAAGATTGACAAAGTATCAATTTCACTGAAACAGGAATCGATTCTGAGCTGCCAAAAGGCATCATTTAAACAAACTTTACAGATGGAGAGATTTTTGGTCTATTTTCAACTATCATGAGATTGTGCATTGGTTCACAGGATTTCACAGAAGATCGTGCACTCAAGATCGTCACAAATTTGCAAATGGGAGTTGCTGCTATTGCTTATGACCGAACTTCGAACTTCCCTGCTCGTGTTAGAGCTCGAAAGCCTTTGTAAGGATGATTTGGCAAGTTCTTCACATCAAGTTTATCTACTTGCAGGCCAGAGAGGACTACACCCATGATCTTAAAACGCACTTGAAATGTGGGAAATACATGAAGCTGTTGTAATCCTGTCTCAAGTGTCAATGTTCCAGACATTGAAGGGGTTTTATCTTTTGGCATCTTTCCAATTGTCCAAGAGCAGATCTGTAGAAACAAATTCTATCCTTTTTAGCTCATCAGAAATAAAACACTATGGGAACTTTAGTATCCTTAAACAAACAAACATACAATTCAGGAACCAACTCCTTTCACTAGACACTAACATAGAAAATAAAAGGCAGGAATTTGGGGGAGGTACCAAACACTACAAAGAAACAGCTGCTCATGCTAATAAAGGTACCAAATGCTTTCAGTGTTGCACATCCCAGACCAAAAACAATGCTTTTCTTTTTTAGAACCAAAATCTGAGATGCTTTTTGGGGGCGTGGTCAATAACAAGGAAATCCCAACAAAGAAACTTACATATTCATCATATAAACACCAGATCCTTTACTAGTCAGAAATTGCCAAATACCAATTTTAAAAGCCACTGCAACGAAAATCAACTTAAAAAGGCATTTAGAAGAACTCTTCTGGTTGATTAGCAAGTAGGGATGGAATATAACTCCTTGTCTTCAGTTTAATGAAATGTTATATTATTTTGGAACAAATAGTGATGCAACTATCACCTTATTAGATAGGATGTTCACTGTTCCATAATTTGAAGTAAGGTCAGCTGATAAAACGCACGGGGGCAATTCAAACTGCACATCTATTAAGTCAATTGGCTTTCCAGGATCATGTCGAATTCCTACCAACACGCTGACTCGACATGTCCCTGCATCTGATGTAAACTGAGGCTTTACATATACAGGAGTATTCTTCAACTTTCGAACCCTGAATGGAAGCAAGATTGATTTGGTAAAGAGGGAATACAAATAATTAACGTATAATTATTTACTTTCCAGTTTCCAGTATCTATGTTCTTCAAGTTATACTTATGCATACCTGTAACTCACGAGCTTAAACTGTCCATCAGGAGGCACAAATGACAGGATTTGATGTGATTCCCATGGGCGAAAGCGAACACAGGGATGGAATCTCACATCATCAAGGATTGAAGGGTTTGTAAATGAAAGGGTCAAATCAGGAAGACCAGATAGATGAGAATTTACTTGGACCTCACCATAAATTTCACACTTGACCAGGTGGCCATCCCTGAACAAGACAGTTCAACAGCAAGATTGAATACAACATGTTTACTATTCTCAAGCACTTGTTATTCATTAGAACTTTCGTTGAGCTGCATTAGTGAAATGTCTATATATTAAGGATCATACAATTTTGCATACTGGATTTCAGAAC

mRNA sequence

CTTATCCTAAAAATCTGAAAACAGAAGTTAGTGTTGTGCTTGGAGAGATTCCTGAAAATGGCTGTGATCCTCGACTCCTTCTTACCTCCAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCCATCACTTCTCCTTCTCCGCGATGGCCTATGGATTCATCCCACAAATGTCGCTCTGAATCTCAATCGATTAAAGCCGTTGCAGTTCCAAGGAGGAATGCAATGGCGTTGATCTTCTCCACTTGTATTTTCTCGAATTCTGCGTTGGCTGAGCCATCTCCATCTCCATCTCCATCTCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCTTCCAGCTATAAGAGCGTTCAGGATTTAGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACTGAGTTCATGTCTACGAGGCTTGGGGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAAAATGGCAGATGATGGAAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAACTGGCAGTAATGCCACAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTCTCGGTTCTTGGAGTCGAAAACAGTCGGCTATATGAATTGAGATTACAAACTCCAGAAAACGTGTTCGTAGAAGAAGAAAATGAGTTGCGTCAAGTTATGGATTCTTTCAGAGTCAACAAAGTGAATGCGTGAAATGAATTGTTGCAGCCGAGGGTTTTCAGATGTAGTAGCTGAAACATTGTACTTTTCATCATCAAAGCAAATTGATTCTGCATTTTACAGTTTGATATTGGAGTCCTGTCTCACTAATCTAATATTTCTTGATTCCTTGATTAAGTAAAAGTGCACCAAAGATTGACAAAGTATCAATTTCACTGAAACAGGAATCGATTCTGAGCTGCCAAAAGGCATCATTTAAACAAACTTTACAGATGGAGAGATTTTTGGTCTATTTTCAACTATCATGAGATTGTGCATTGGTTCACAGGATTTCACAGAAGATCGTGCACTCAAGATCGTCACAAATTTGCAAATGGGAGTTGCTGCTATTGCTTATGACCGAACTTCGAACTTCCCTGCTCGTGTTAGAGCTCGAAAGCCTTTGTAAGGATGATTTGGCAAGTTCTTCACATCAAGTTTATCTACTTGCAGGCCAGAGAGGACTACACCCATGATCTTAAAACGCACTTGAAATGTGGGAAATACATGAAGCTGTTGTAATCCTGTCTCAAGTGTCAATGTTCCAGACATTGAAGGGGTTTTATCTTTTGGCATCTTTCCAATTGTCCAAGAGCAGATCTGTAGAAACAAATTCTATCCTTTTTAGCTCATCAGAAATAAAACACTATGGGAACTTTAGTATCCTTAAACAAACAAACATACAATTCAGGAACCAACTCCTTTCACTAGACACTAACATAGAAAATAAAAGGCAGGAATTTGGGGGAGGTACCAAACACTACAAAGAAACAGCTGCTCATGCTAATAAAGGTACCAAATGCTTTCAGTGTTGCACATCCCAGACCAAAAACAATGCTTTTCTTTTTTAGAACCAAAATCTGAGATGCTTTTTGGGGGCGTGGTCAATAACAAGGAAATCCCAACAAAGAAACTTACATATTCATCATATAAACACCAGATCCTTTACTAGTCAGAAATTGCCAAATACCAATTTTAAAAGCCACTGCAACGAAAATCAACTTAAAAAGGCATTTAGAAGAACTCTTCTGGTTGATTAGCAAGTAGGGATGGAATATAACTCCTTGTCTTCAGTTTAATGAAATGTTATATTATTTTGGAACAAATAGTGATGCAACTATCACCTTATTAGATAGGATGTTCACTGTTCCATAATTTGAAGTAAGGTCAGCTGATAAAACGCACGGGGGCAATTCAAACTGCACATCTATTAAGTCAATTGGCTTTCCAGGATCATGTCGAATTCCTACCAACACGCTGACTCGACATGTCCCTGCATCTGATGTAAACTGAGGCTTTACATATACAGGAGTATTCTTCAACTTTCGAACCCTGAATGGAAGCAAGATTGATTTGGAGGCACAAATGACAGGATTTGATGTGATTCCCATGGGCGAAAGCGAACACAGGGATGGAATCTCACATCATCAAGGATTGAAGGGTTTGTAAATGAAAGGGTCAAATCAGGAAGACCAGATAGATGAGAATTTACTTGGACCTCACCATAAATTTCACACTTGACCAGGTGGCCATCCCTGAACAAGACAGTTCAACAGCAAGATTGAATACAACATGTTTACTATTCTCAAGCACTTGTTATTCATTAGAACTTTCGTTGAGCTGCATTAGTGAAATGTCTATATATTAAGGATCATACAATTTTGCATACTGGATTTCAGAAC

Coding sequence (CDS)

ATGGCTGTGATCCTCGACTCCTTCTTACCTCCAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCCATCACTTCTCCTTCTCCGCGATGGCCTATGGATTCATCCCACAAATGTCGCTCTGAATCTCAATCGATTAAAGCCGTTGCAGTTCCAAGGAGGAATGCAATGGCGTTGATCTTCTCCACTTGTATTTTCTCGAATTCTGCGTTGGCTGAGCCATCTCCATCTCCATCTCCATCTCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCTTCCAGCTATAAGAGCGTTCAGGATTTAGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACTGAGTTCATGTCTACGAGGCTTGGGGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAAAATGGCAGATGATGGAAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAACTGGCAGTAATGCCACAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTCTCGGTTCTTGGAGTCGAAAACAGTCGGCTATATGAATTGAGATTACAAACTCCAGAAAACGTGTTCGTAGAAGAAGAAAATGAGTTGCGTCAAGTTATGGATTCTTTCAGAGTCAACAAAGTGAATGCGTGA

Protein sequence

MAVILDSFLPPIHTLSSSIRQRIPITSPSPRWPMDSSHKCRSESQSIKAVAVPRRNAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKVNA

Homology

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BLAST of CcUC01G011010 vs. NCBI nr
Match: XP_038894971.1 (psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_038894972.1 psbP domain-containing protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.2e-128
Identity = 244/268 (91.04%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRWPMDSSHKCRSESQSI-KAVAVPRRNAMA 60
           MAVIL+SFLPPIHTL SSIRQRIP TSPSPRWPMDSS KCRSESQSI K VAVPRR+AMA
Sbjct: 1   MAVILNSFLPPIHTLISSIRQRIPCTSPSPRWPMDSSPKCRSESQSIKKGVAVPRRSAMA 60

Query: 61  LIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRD 120
           L+ ST IFSNSALAE      PSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAG+DIFFRD
Sbjct: 61  LMLSTYIFSNSALAE------PSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGSDIFFRD 120

Query: 121 PFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILST 180
           PFVLDENL VEFSSPSSS Y SVQDLGPPEEAGK+VLKQYLTEFMSTRLGVRRESNILST
Sbjct: 121 PFVLDENLLVEFSSPSSSRYNSVQDLGPPEEAGKRVLKQYLTEFMSTRLGVRRESNILST 180

Query: 181 SSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRL 240
           SS+MADDG+TYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRL
Sbjct: 181 SSRMADDGKTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRL 240

Query: 241 QTPENVFVEEENELRQVMDSFRVNKVNA 268
           QTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 QTPENVFVEEENELRQVMDSFRVNKVNA 262

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BLAST of CcUC01G011010 vs. NCBI nr
Match: XP_022961486.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024032.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.8 bits (1161), Expect = 4.0e-123
Identity = 239/272 (87.87%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRW-PMDSSHKCR----SESQSIKAVAVPRR 60
           MAVILDSFLPPIHTLSSS R+ IP  S SPRW P+DSS KCR    SESQ IKA+AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  NAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           +AMALI S+CIFSNSALAE         SVGLLEYIDTFDGYSF YPKNWIQVRGAGADI
Sbjct: 61  SAMALILSSCIFSNSALAE--------QSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPFVLDEN+SVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           ILSTSS+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           ELRLQTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

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BLAST of CcUC01G011010 vs. NCBI nr
Match: XP_004139523.1 (psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8652838.1 hypothetical protein Csa_022829 [Cucumis sativus])

HSP 1 Score: 451.1 bits (1159), Expect = 6.9e-123
Identity = 239/267 (89.51%), Postives = 244/267 (91.39%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRWPMDSSHKCRSESQSIKAVAVPRRNAMAL 60
           MAVILDSFLP I TLSSS RQRIP TS S RWPM+S  KC SESQSIK VAVPRR+AMAL
Sbjct: 1   MAVILDSFLPSIQTLSSSFRQRIPSTS-STRWPMNSFPKCCSESQSIKGVAVPRRSAMAL 60

Query: 61  IFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120
           + STCIFSNSALA          SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP
Sbjct: 61  MLSTCIFSNSALA--------VSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120

Query: 121 FVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180
           FVLDENLSVEFSSPSSS Y SVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS
Sbjct: 121 FVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180

Query: 181 SKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240
           S+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ
Sbjct: 181 SRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240

Query: 241 TPENVFVEEENELRQVMDSFRVNKVNA 268
           TPENVFVEEEN+LRQVMDSFRVNKVNA
Sbjct: 241 TPENVFVEEENDLRQVMDSFRVNKVNA 258

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BLAST of CcUC01G011010 vs. NCBI nr
Match: XP_022968780.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 448.7 bits (1153), Expect = 3.4e-122
Identity = 237/272 (87.13%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRW-PMDSSHKCR----SESQSIKAVAVPRR 60
           MAVILDSFLPPIHTLSSS R+ IP  SPSPRW P+DSS K R    SES+ IKA+AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASPSPRWPPIDSSPKSRFSLTSESKPIKALAVPRR 60

Query: 61  NAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           +AMALI S+CIFSNSA+AE         SVGLLEYIDTFDGYSF YPKNWIQVRGAGADI
Sbjct: 61  SAMALILSSCIFSNSAMAE--------QSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPFVLDEN+SVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           ILSTSS+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           ELRLQTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

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BLAST of CcUC01G011010 vs. NCBI nr
Match: XP_023515691.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.3 bits (1144), Expect = 3.8e-121
Identity = 236/272 (86.76%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRW-PMDSSHKCR----SESQSIKAVAVPRR 60
           MAVILDSFLPPIHTL+SS R+ IP  S SPRW P+DSS K R    SESQ IK +AVPRR
Sbjct: 1   MAVILDSFLPPIHTLTSSSRKWIPTASSSPRWPPIDSSPKSRFSLSSESQPIKGLAVPRR 60

Query: 61  NAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           +AMALI S+CIFSNSALAE         SVGLLEYIDTFDGYSF YPKNWIQVRGAGADI
Sbjct: 61  SAMALILSSCIFSNSALAE--------QSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPFVLDEN+SVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           ILSTSS+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           ELRLQTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

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BLAST of CcUC01G011010 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83
Identity = 159/226 (70.35%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 40  CRSESQSIKAVAVPRRNAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSF 99
           C ++++ + AV   +   M L+ S  I S + L    P+   S  V   EYIDTFDGYSF
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANL----PTAFASTPV-FREYIDTFDGYSF 126

Query: 100 KYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQY 159
           KYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS+Y S++DLG PEE GK+VL+QY
Sbjct: 127 KYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQY 186

Query: 160 LTEFMSTRLGVRRESNILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEW 219
           LTEFMSTRLGV+R++NILSTSS++ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW
Sbjct: 187 LTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEW 246

Query: 220 DRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 266
           +RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+VMDSFRV K+
Sbjct: 247 NRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287

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BLAST of CcUC01G011010 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.9e-04
Identity = 48/217 (22.12%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 54  RRNAM---ALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRG 113
           RR A+     + +T I +   LAE  P  S SP      ++D  DGYS+ YP +W +   
Sbjct: 59  RRQALVGVGTLVATSIPATLLLAEEIPK-SYSP------FVDREDGYSYYYPSDWREFDF 118

Query: 114 AGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGV 173
              D  F+D ++  +N+ V F     +    + ++GP EE    ++K         +   
Sbjct: 119 RAHDSAFKDRYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAA 178

Query: 174 RRESNILSTSSKMADDGRTYYQVEVNIKS--YANNNELAVMPQDRVVRLEWDRRYLSVLG 233
             +   +    +  +DG+ YY  E  +++  YA  +                    + + 
Sbjct: 179 PNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVA 238

Query: 234 VENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 266
           V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 239 VGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL
Match: A0A6J1HAH2 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462051 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.0e-123
Identity = 239/272 (87.87%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRW-PMDSSHKCR----SESQSIKAVAVPRR 60
           MAVILDSFLPPIHTLSSS R+ IP  S SPRW P+DSS KCR    SESQ IKA+AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  NAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           +AMALI S+CIFSNSALAE         SVGLLEYIDTFDGYSF YPKNWIQVRGAGADI
Sbjct: 61  SAMALILSSCIFSNSALAE--------QSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPFVLDEN+SVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           ILSTSS+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           ELRLQTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL
Match: A0A6J1HY63 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467914 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 237/272 (87.13%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRW-PMDSSHKCR----SESQSIKAVAVPRR 60
           MAVILDSFLPPIHTLSSS R+ IP  SPSPRW P+DSS K R    SES+ IKA+AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASPSPRWPPIDSSPKSRFSLTSESKPIKALAVPRR 60

Query: 61  NAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           +AMALI S+CIFSNSA+AE         SVGLLEYIDTFDGYSF YPKNWIQVRGAGADI
Sbjct: 61  SAMALILSSCIFSNSAMAE--------QSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPFVLDEN+SVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           ILSTSS+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           ELRLQTPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL
Match: A0A5D3E4R5 (PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00220 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 237/267 (88.76%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRWPMDSSHKCRSESQSIKAVAVPRRNAMAL 60
           MAVIL SFLP I TL+S IRQRIP TS S R P+ S  KC S+SQSIK VAVPRRNAMAL
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS-STRSPIISFPKCCSQSQSIKDVAVPRRNAMAL 60

Query: 61  IFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120
           I STCIFSNSA A         PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP
Sbjct: 61  ILSTCIFSNSAFA--------VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120

Query: 121 FVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180
           FVLDENLSVEFSSPSSS Y SVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS
Sbjct: 121 FVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180

Query: 181 SKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240
           S+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ
Sbjct: 181 SRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240

Query: 241 TPENVFVEEENELRQVMDSFRVNKVNA 268
           TPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 TPENVFVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL
Match: A0A1S3CLM8 (psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 237/267 (88.76%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPITSPSPRWPMDSSHKCRSESQSIKAVAVPRRNAMAL 60
           MAVIL SFLP I TL+S IRQRIP TS S R P+ S  KC S+SQSIK VAVPRRNAMAL
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS-STRSPIISFPKCCSQSQSIKDVAVPRRNAMAL 60

Query: 61  IFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120
           I STCIFSNSA A         PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP
Sbjct: 61  ILSTCIFSNSAFA--------VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 120

Query: 121 FVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180
           FVLDENLSVEFSSPSSS Y SVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS
Sbjct: 121 FVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTS 180

Query: 181 SKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240
           S+MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ
Sbjct: 181 SRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 240

Query: 241 TPENVFVEEENELRQVMDSFRVNKVNA 268
           TPENVFVEEENELRQVMDSFRVNKVNA
Sbjct: 241 TPENVFVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL
Match: A0A6J1DTH5 (psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023855 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.5e-120
Identity = 234/279 (83.87%), Postives = 249/279 (89.25%), Query Frame = 0


Query: 1   MAVILDSFLPPIHTLSSSIRQRIPIT--SPSPRWPMDSSHKCR------SESQSIKAVAV 60
           MAVILDS  PPIH+LSSSIR+RIP T  SPSPRWP DS  K R      S+SQ+IKA+AV
Sbjct: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60

Query: 61  PRRNAMALIFSTCIFS----NSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQV 120
           PRR+AMALI STCIFS    N+ALA+P       PS GLLEYIDTFDGYSFKYPKNWIQV
Sbjct: 61  PRRSAMALILSTCIFSNTNTNTALADP-------PSPGLLEYIDTFDGYSFKYPKNWIQV 120

Query: 121 RGAGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRL 180
           RGAGADIFFRDP+VLDENLSVEFSSPSSS YKSV+DLGPPEEAGKKVLKQYLTEFMSTRL
Sbjct: 121 RGAGADIFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRL 180

Query: 181 GVRRESNILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLG 240
           GVRRESN+LSTSS+ ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLG
Sbjct: 181 GVRRESNVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLG 240

Query: 241 VENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKVNA 268
           VENSRLYELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 VENSRLYELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272

[Close]

BLAST of CcUC01G011010 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-84
Identity = 159/226 (70.35%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 40  CRSESQSIKAVAVPRRNAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSF 99
           C ++++ + AV   +   M L+ S  I S + L    P+   S  V   EYIDTFDGYSF
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANL----PTAFASTPV-FREYIDTFDGYSF 126

Query: 100 KYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQY 159
           KYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS+Y S++DLG PEE GK+VL+QY
Sbjct: 127 KYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQY 186

Query: 160 LTEFMSTRLGVRRESNILSTSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEW 219
           LTEFMSTRLGV+R++NILSTSS++ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW
Sbjct: 187 LTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEW 246

Query: 220 DRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 266
           +RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+VMDSFRV K+
Sbjct: 247 NRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287

[Close]

BLAST of CcUC01G011010 vs. TAIR 10
Match: AT4G15510.3 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.3e-83
Identity = 156/208 (75.00%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 58  MALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFF 117
           M L+ S  I S + L    P+   S  V   EYIDTFDGYSFKYP+NWIQVRGAGADIFF
Sbjct: 3   MGLLMSGLIVSQANL----PTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFF 62

Query: 118 RDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNIL 177
           RDP VLDENLSVEFSSPSSS+Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NIL
Sbjct: 63  RDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANIL 122

Query: 178 STSSKMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYEL 237
           STSS++ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL+VLGVEN RLY +
Sbjct: 123 STSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSI 182

Query: 238 RLQTPENVFVEEENELRQVMDSFRVNKV 266
           RLQTPE VF+EEE +LR+VMDSFRV K+
Sbjct: 183 RLQTPEKVFLEEEKDLRRVMDSFRVEKI 205

[Close]

BLAST of CcUC01G011010 vs. TAIR 10
Match: AT4G15510.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-50
Identity = 103/163 (63.19%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 40  CRSESQSIKAVAVPRRNAMALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSF 99
           C ++++ + AV   +   M L+ S  I S + L    P+   S  V   EYIDTFDGYSF
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANL----PTAFASTPV-FREYIDTFDGYSF 126

Query: 100 KYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQY 159
           KYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS+Y S++DLG PEE GK+VL+QY
Sbjct: 127 KYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQY 186

Query: 160 LTEFMSTRLGVRRESNILSTSSKMADDGRTYYQVEVNIKSYAN 203
           LTEFMSTRLGV+R++NILSTSS++ADDG+ YYQVEV+     N
Sbjct: 187 LTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVSQSQVPN 224

[Close]

BLAST of CcUC01G011010 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 48/217 (22.12%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 54  RRNAM---ALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRG 113
           RR A+     + +T I +   LAE  P  S SP      ++D  DGYS+ YP +W +   
Sbjct: 59  RRQALVGVGTLVATSIPATLLLAEEIPK-SYSP------FVDREDGYSYYYPSDWREFDF 118

Query: 114 AGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGV 173
              D  F+D ++  +N+ V F     +    + ++GP EE    ++K         +   
Sbjct: 119 RAHDSAFKDRYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAA 178

Query: 174 RRESNILSTSSKMADDGRTYYQVEVNIKS--YANNNELAVMPQDRVVRLEWDRRYLSVLG 233
             +   +    +  +DG+ YY  E  +++  YA  +                    + + 
Sbjct: 179 PNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVA 238

Query: 234 VENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 266
           V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 239 VGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of CcUC01G011010 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 48/217 (22.12%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 54  RRNAM---ALIFSTCIFSNSALAEPSPSPSPSPSVGLLEYIDTFDGYSFKYPKNWIQVRG 113
           RR A+     + +T I +   LAE  P  S SP      ++D  DGYS+ YP +W +   
Sbjct: 51  RRQALVGVGTLVATSIPATLLLAEEIPK-SYSP------FVDREDGYSYYYPSDWREFDF 110

Query: 114 AGADIFFRDPFVLDENLSVEFSSPSSSSYKSVQDLGPPEEAGKKVLKQYLTEFMSTRLGV 173
              D  F+D ++  +N+ V F     +    + ++GP EE    ++K         +   
Sbjct: 111 RAHDSAFKDRYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAA 170

Query: 174 RRESNILSTSSKMADDGRTYYQVEVNIKS--YANNNELAVMPQDRVVRLEWDRRYLSVLG 233
             +   +    +  +DG+ YY  E  +++  YA  +                    + + 
Sbjct: 171 PNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVA 230

Query: 234 VENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 266
           V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 231 VGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 230

The following BLAST results are available for this feature:

BLAST of CcUC01G011010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894971.1	4.2e-128	91.04	psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_03889497...	[more]
XP_022961486.1	4.0e-123	87.87	psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498...	[more]
XP_004139523.1	6.9e-123	89.51	psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KA...	[more]
XP_022968780.1	3.4e-122	87.13	psbP domain-containing protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_023515691.1	3.8e-121	86.76	psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC01G011010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23403	1.9e-83	70.35	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
O80634	3.9e-04	22.12	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of CcUC01G011010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAH2	2.0e-123	87.87	psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HY63	1.7e-122	87.13	psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3E4R5	1.5e-120	88.76	PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CLM8	1.5e-120	88.76	psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1DTH5	4.5e-120	83.87	psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC01G011010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15510.1	1.4e-84	70.35	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.3	3.3e-83	75.00	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.2	2.8e-50	63.19	Photosystem II reaction center PsbP family protein	[more]
AT2G39470.1	2.8e-05	22.12	PsbP-like protein 2	[more]
AT2G39470.2	2.8e-05	22.12	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 82..262 e-value: 1.2E-51 score: 177.1
None	No IPR available	PANTHER	PTHR31407:SF15	PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 35..266
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 35..266
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 87..262 e-value: 1.2E-48 score: 165.2
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 90..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G011010.1	CcUC01G011010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer
molecular_function	GO:0005509	calcium ion binding