Homology
BLAST of CcUC01G007320 vs. NCBI nr
Match:
XP_038874313.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 [Benincasa hispida] >XP_038874314.1 pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 567/611 (92.80%), Postives = 584/611 (95.58%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAVTGSPDWSL PST FRKSHLI IPTSNL+ LFSLP SNLRSLHL SS CPSPILEQS
Sbjct: 1 MAVTGSPDWSLPPSTSFRKSHLINFIPTSNLSFLFSLPTSNLRSLHLKSSGCPSPILEQS 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIHLDSNLQD QLPSLP VEDLNDFLCGLSQN G+EDLIYEYYVKAKE+AGFRPE
Sbjct: 61 SIALPDIHLDSNLQDIQLPSLPTVEDLNDFLCGLSQNPGSEDLIYEYYVKAKEKAGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLILLVSRDFVDY V PDRDTCSRLVSSCVRG KFKVVKALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLILLVSRDFVDYSVCPDRDTCSRLVSSCVRGRKFKVVKALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFE+DSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGC CRVMEAYLKLGD
Sbjct: 181 VFEKDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCCCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI DF PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGI EDYTI
Sbjct: 241 SERVMELFNEVESRISDFTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALI TFASIQEVKLAEDL+NEAKAKKLLRDPA+FLKLILM+IQQGSLEKALE+V+VMK
Sbjct: 301 YSALISTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALELVQVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAEDMF EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM
Sbjct: 421 KAEDMFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAY KASEFETCE+YY EFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYAKASEFETCEQYYLEFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKAMAGIMVGVFSKTSRVDELVKLLRDM LEGTRLDGRLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDGRLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
Q HYAGKSG+V
Sbjct: 601 QGHYAGKSGFV 611
BLAST of CcUC01G007320 vs. NCBI nr
Match:
XP_004151188.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucumis sativus] >KGN49761.1 hypothetical protein Csa_017804 [Cucumis sativus])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 573/611 (93.78%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MA++ SPD S PS FRKSH I+ TSN +LLFSLP SNL SLHLNSS CPSPILEQ
Sbjct: 1 MALSPSPDCSFPPSNSFRKSHFIS---TSNFSLLFSLPTSNLPSLHLNSSGCPSPILEQP 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIH +SNL DFQLPSLPNV+DLNDFLCGLSQN GTEDLIY+YYVKAKE AGFRP+
Sbjct: 61 SIALPDIHSNSNLHDFQLPSLPNVQDLNDFLCGLSQNPGTEDLIYDYYVKAKETAGFRPQ 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLILLVSRDFVD+GV PDRDTCS+LVSSCVRG KFKVVK+LLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLILLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERDS VA AFEAAMRGYNKLHM+KSTI+VFQRLKSARIEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGIAEDYTI
Sbjct: 241 SERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAKAKKLLRDPA+FLKLILM++QQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGY AAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFE CE+YYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA GIMVGVFSKTSRVDELVKLLRDM LEGTRLD RLYR+ALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 608
BLAST of CcUC01G007320 vs. NCBI nr
Match:
XP_022938691.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 546/611 (89.36%), Postives = 570/611 (93.29%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAVTGSPDWSL ST FRKS L+T IP SNLALLFSLP NLRSLHLNSS CPSPILE S
Sbjct: 1 MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
+LP+I DSNLQDFQLPS +VEDLNDFLCGL QN G EDLIYEYYVKAKE GFRPE
Sbjct: 61 PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVR K W+LILLVSRDFVDY V PDRDTCSRLVSSCVRG KFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERD DVATAAFEAAMRGYNKLHMYKSTILVFQRLKSA+IEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ER++ELF+E+ESRI DF PFSTKIYGILC+SLAK GRVFESLEFFRDM+KKGI EDYTI
Sbjct: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAK KKLLRDPA+F KLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGYNAAV VYEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM
Sbjct: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKA+EFETCERYYREFRMNGGA
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGA 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+AGIMVGVFSKTSRVDELVKLLRDMNLEG RLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 609
BLAST of CcUC01G007320 vs. NCBI nr
Match:
XP_022993436.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 [Cucurbita maxima])
HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 568/611 (92.96%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAVTGSPDWSL ST FRKS LIT IP SNLALLFSLP NLRSLHLNSS CPSPILE S
Sbjct: 1 MAVTGSPDWSLPSSTCFRKSRLITFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
+LP+I DSNLQDFQLPS +VEDLNDFLCGL QN G EDLIYEYYVKAKE GFRPE
Sbjct: 61 PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKW LILLVSRDFVDY V PDRDTCSRLVSSCVRG KFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWSLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERD DVATAAFEAAMRGYNKLHMY+STILVFQRLKSA+IEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDRDVATAAFEAAMRGYNKLHMYRSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ER++ELF+E+ESRI DF PFSTKIYGILC+SLAK GRVFESLEFFRDM+KKGI EDYTI
Sbjct: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAK KKLLRDPA F KLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPATFQKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+G SDCIFCAIVNGYATRRGYNAAV +YEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGASDCIFCAIVNGYATRRGYNAAVNIYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM
Sbjct: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKA+EFETCERYYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+AGIMVGVFSKTSRVDELVKLLRDMNLEG RLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 609
BLAST of CcUC01G007320 vs. NCBI nr
Match:
XP_008465506.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucumis melo])
HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 547/611 (89.53%), Postives = 571/611 (93.45%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAV+ SPD S PS FRKSH IPTSN LLFSLP SNL SLHLNSS PSPILEQ
Sbjct: 1 MAVSPSPDCSFPPSNSFRKSH---FIPTSNFPLLFSLPTSNLPSLHLNSSGFPSPILEQP 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIH +SNL DFQLP L NVEDLNDFLCGLSQN GTEDLIY+YYVKAKERAGFRPE
Sbjct: 61 SIALPDIHSNSNLHDFQLPPLSNVEDLNDFLCGLSQNPGTEDLIYDYYVKAKERAGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLI LVSRDFVD+GV PDRDTCS+LVSSCVRG KFKVVKALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLIFLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERDSDVA AFEAAMRGYNKLHMYKSTI+VFQRLKSARIEADSGCY RVMEAYLKLGD
Sbjct: 181 VFERDSDVAMTAFEAAMRGYNKLHMYKSTIMVFQRLKSARIEADSGCYFRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI + PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGIAEDYTI
Sbjct: 241 SERVMELFNEVESRISNLTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASI+EVKLAEDL+NEAKAKKLLRDPA+FLKLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIREVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGY+AAVKVYEKLI DGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYDAAVKVYEKLIGDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKASEFE CE+YYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKASEFEKCEQYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+ GIMVGVFSKTSRVDELVKLLRDM LEGTRLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 608
BLAST of CcUC01G007320 vs. ExPASy Swiss-Prot
Match:
Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)
HSP 1 Score: 583.6 bits (1503), Expect = 2.7e-165
Identity = 306/580 (52.76%), Postives = 400/580 (68.97%), Query Frame = 0
Query: 27 PTSNLALLFSLPASNLRSLHLNSSDCPSPILEQSSIALPDIHLDSNLQDFQLPSLPNVED 86
PT + L P + H+ SS C S +LE+ P S +D P D
Sbjct: 24 PTKPIFFLSQKP----HNFHVCSSRC-SMVLEEDEKKSP-----SPKEDKWPFFEPGPND 83
Query: 87 LNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPEKSTLRHLVRYLVRLKKWDLILLVSRD 146
LN L ++ T L E+Y KAKE + R T +HL+ YLV K WDL++ V D
Sbjct: 84 LNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLVSVCED 143
Query: 147 FVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLEVFERDSDVATAAFEAAMRGYNKLHMY 206
++ PD TCS L+ SC+R KF++ LL VF D +A +A +AAM+G+NKL MY
Sbjct: 144 LREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMY 203
Query: 207 KSTILVFQRLK-SARIEADSGCYCRVMEAYLKLGDFERVVELFDEVESRILDF-APFSTK 266
STI VF RLK S +E GCYCR+MEA+ K+G+ +VVELF E +S+ L F A S
Sbjct: 204 SSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGS 263
Query: 267 IYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASIQEVKLAEDLFNEA 326
IY I+C SLAK GR FE+LE +MK KGI E +YS LI FA +EV + E LF EA
Sbjct: 264 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 323
Query: 327 KAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIFCAIVNGYATRRGY 386
KKLL+DP + LK++LM++++G++E LE+V M+ ++ V+DCI CAIVNG++ +RG+
Sbjct: 324 GGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGF 383
Query: 387 NAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMFREMEEKGFDKCVVAYSSL 446
AVKVYE +++ CE GQVTYA AINAYCR+ Y+KAE +F EM +KGFDKCVVAYS++
Sbjct: 384 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 443
Query: 447 ISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKI 506
+ MYGKT RL DA+RL+AKMK+RGC+PN+WIYN L++MHG+A +L++ EK+WKEMKR K+
Sbjct: 444 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 503
Query: 507 APDKVSYTSIISAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELVK 566
PDKVSYTS+ISAY ++ E E C Y+EFRMN G ID+AMAGIMVGVFSKTSR+DEL++
Sbjct: 504 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMR 563
Query: 567 LLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWLQDHY 605
LL+DM +EGTRLD RLY SALNAL DAGL Q +WLQ+ +
Sbjct: 564 LLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESF 589
BLAST of CcUC01G007320 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 2.3e-36
Identity = 115/524 (21.95%), Postives = 241/524 (45.99%), Query Frame = 0
Query: 77 QLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKER-AGFRPEKSTLRHLVRYLVRLK 136
+L +PNV N L GL +++ + ++ A +R G P+ + ++ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 137 KWDLILLVSRDFVDYGVSPDRDTCSRLVSS-CVRGGKFKVVKALLEVFERDSDVATAAFE 196
D + +D G+ PD T + ++++ C K ++ L + + +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 197 AAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVESR 256
+ + GY K I ++++S +E D Y +M+ K G ++FD + R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 257 ILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASIQEV 316
L P T YG L + A G + E M + GI D+ ++S LIC +A +V
Sbjct: 331 GL--KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 390
Query: 317 KLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIFCAI 376
A +F++ + + L + + +I + + G +E A+ E M D + + ++ ++
Sbjct: 391 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 450
Query: 377 VNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMFREMEEKGF 436
++G T + A ++ ++++ G + + S I+++C+ G ++E +F M G
Sbjct: 451 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 510
Query: 437 DKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEK 496
V+ Y++LI+ Y G++ +AM+LL+ M G +PN Y+ L+ + K ++
Sbjct: 511 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 570
Query: 497 LWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFS 556
L+KEM+ ++PD ++Y I+ + + Y +G I+ + I++
Sbjct: 571 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 630
Query: 557 KTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAK 599
K D+ +++ +++ L +L+ R + ++AL+ G +AK
Sbjct: 631 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
BLAST of CcUC01G007320 vs. ExPASy Swiss-Prot
Match:
Q8S8P6 (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX=3702 GN=At2g32630 PE=3 SV=1)
HSP 1 Score: 146.7 bits (369), Expect = 8.3e-34
Identity = 105/445 (23.60%), Postives = 204/445 (45.84%), Query Frame = 0
Query: 148 VDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLEVFER--DSDVATAAFE--AAMRGYNKL 207
V G+S D +C + V K + + LE+F R DS V + + G +
Sbjct: 181 VKKGLSIDERSC---IVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRR 240
Query: 208 HMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVESRILDFAPFST 267
+ + + + I+ ++ Y ++ AY+K DF V + ++ D ++
Sbjct: 241 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK---DGVVYNK 300
Query: 268 KIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASIQEVKLAEDLFNE 327
Y +L E K G++ ++ + F +M+++GI D +Y++LI +K A LF+E
Sbjct: 301 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 360
Query: 328 AKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIFCAIVNGYATRRG 387
K L + LI + G + A ++ M+ V ++ +F +++GY +
Sbjct: 361 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 420
Query: 388 YNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMFREMEEKGFDKCVVAYSS 447
+ A +Y+ + + G + T + + + R+ Y +A+ M E G V+Y++
Sbjct: 421 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 480
Query: 448 LISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKK 507
LI +Y K G +++A RL +M +G QPN YN+++ + K +K+ KL M+
Sbjct: 481 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 540
Query: 508 IAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELV 567
+ PD +YTS+I A + R + E + G + +M+ SK + DE
Sbjct: 541 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 600
Query: 568 KLLRDMNLEGTRLDGRLYRSALNAL 589
L +M +G +D ++Y + + ++
Sbjct: 601 GLYDEMKRKGYTIDNKVYTALIGSM 619
BLAST of CcUC01G007320 vs. ExPASy Swiss-Prot
Match:
O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.4e-33
Identity = 98/415 (23.61%), Postives = 191/415 (46.02%), Query Frame = 0
Query: 193 FEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVE 252
F + Y + YK ++ +L +R Y +++AY G ER + E++
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 253 SRILDFAPFSTKIYGILCESLAK-LGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASI 312
+ + +Y E L K G E+++ F+ MK+ Y+ +I +
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 313 QEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIF 372
+ ++ L+ E ++ + + + L+ ++G EKA EI E +++ + ++
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337
Query: 373 CAIVNGYATRRGY-NAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMF---- 432
A++ Y +R GY A +++ + GCEP + +Y ++AY R GL+S AE +F
Sbjct: 338 NALMESY-SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 397
Query: 433 -------------------------------REMEEKGFDKCVVAYSSLISMYGKTGRLK 492
+EM E G + +S++++YG+ G+
Sbjct: 398 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 457
Query: 493 DAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 552
++LA+M+ C ++ YNIL+ ++GKA L+++E+L+ E+K K PD V++TS I
Sbjct: 458 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 517
Query: 553 SAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELVKLLRDMN 571
AY + + C + E +G A D A +++ S +V+++ +LR M+
Sbjct: 518 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
BLAST of CcUC01G007320 vs. ExPASy Swiss-Prot
Match:
Q9LW84 (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 4.1e-33
Identity = 109/470 (23.19%), Postives = 207/470 (44.04%), Query Frame = 0
Query: 122 STLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKF-KVVKALLE 181
+ L LV+ L R K L V P T + ++ ++ G+ KV + E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 182 VF-ERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLG 241
+ E D T + A + Y KL S I +F +K ++ Y ++ Y K+G
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 242 DFERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYT 301
E+ ++LF+E++ ++ Y L + L K GRV E+ F++DM + G+ D
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYT---YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 342
Query: 302 IYSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLI-LMHIQQGSLEKALEIVEV 361
+ L+ + V+ ++F+E + + +I + + + + +
Sbjct: 343 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 402
Query: 362 MKDFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGL 421
MK V S+ + +++GY A+ + E++ E G P Y S INA +
Sbjct: 403 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 462
Query: 422 YSKAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNI 481
Y A ++F+E++E + Y+ +I +GK G+L +A+ L +MK +G P+V+ YN
Sbjct: 463 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 522
Query: 482 LMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNG 541
LM KA + + L ++M+ D S+ I++ + + + + +G
Sbjct: 523 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 582
Query: 542 GAIDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNAL 589
D ++G F+ +E +++R+M +G D Y S L+A+
Sbjct: 583 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
BLAST of CcUC01G007320 vs. ExPASy TrEMBL
Match:
A0A0A0KPV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114580 PE=4 SV=1)
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 573/611 (93.78%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MA++ SPD S PS FRKSH I+ TSN +LLFSLP SNL SLHLNSS CPSPILEQ
Sbjct: 1 MALSPSPDCSFPPSNSFRKSHFIS---TSNFSLLFSLPTSNLPSLHLNSSGCPSPILEQP 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIH +SNL DFQLPSLPNV+DLNDFLCGLSQN GTEDLIY+YYVKAKE AGFRP+
Sbjct: 61 SIALPDIHSNSNLHDFQLPSLPNVQDLNDFLCGLSQNPGTEDLIYDYYVKAKETAGFRPQ 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLILLVSRDFVD+GV PDRDTCS+LVSSCVRG KFKVVK+LLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLILLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERDS VA AFEAAMRGYNKLHM+KSTI+VFQRLKSARIEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGIAEDYTI
Sbjct: 241 SERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAKAKKLLRDPA+FLKLILM++QQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGY AAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFE CE+YYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA GIMVGVFSKTSRVDELVKLLRDM LEGTRLD RLYR+ALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 608
BLAST of CcUC01G007320 vs. ExPASy TrEMBL
Match:
A0A6J1FDV4 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444845 PE=4 SV=1)
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 546/611 (89.36%), Postives = 570/611 (93.29%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAVTGSPDWSL ST FRKS L+T IP SNLALLFSLP NLRSLHLNSS CPSPILE S
Sbjct: 1 MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
+LP+I DSNLQDFQLPS +VEDLNDFLCGL QN G EDLIYEYYVKAKE GFRPE
Sbjct: 61 PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVR K W+LILLVSRDFVDY V PDRDTCSRLVSSCVRG KFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERD DVATAAFEAAMRGYNKLHMYKSTILVFQRLKSA+IEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ER++ELF+E+ESRI DF PFSTKIYGILC+SLAK GRVFESLEFFRDM+KKGI EDYTI
Sbjct: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAK KKLLRDPA+F KLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGYNAAV VYEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM
Sbjct: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKA+EFETCERYYREFRMNGGA
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGA 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+AGIMVGVFSKTSRVDELVKLLRDMNLEG RLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 609
BLAST of CcUC01G007320 vs. ExPASy TrEMBL
Match:
A0A6J1JWB4 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489451 PE=4 SV=1)
HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 568/611 (92.96%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAVTGSPDWSL ST FRKS LIT IP SNLALLFSLP NLRSLHLNSS CPSPILE S
Sbjct: 1 MAVTGSPDWSLPSSTCFRKSRLITFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
+LP+I DSNLQDFQLPS +VEDLNDFLCGL QN G EDLIYEYYVKAKE GFRPE
Sbjct: 61 PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKW LILLVSRDFVDY V PDRDTCSRLVSSCVRG KFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWSLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERD DVATAAFEAAMRGYNKLHMY+STILVFQRLKSA+IEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDRDVATAAFEAAMRGYNKLHMYRSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ER++ELF+E+ESRI DF PFSTKIYGILC+SLAK GRVFESLEFFRDM+KKGI EDYTI
Sbjct: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASIQEVKLAEDL+NEAK KKLLRDPA F KLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPATFQKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+G SDCIFCAIVNGYATRRGYNAAV +YEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGASDCIFCAIVNGYATRRGYNAAVNIYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM
Sbjct: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKA+EFETCERYYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+AGIMVGVFSKTSRVDELVKLLRDMNLEG RLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 609
BLAST of CcUC01G007320 vs. ExPASy TrEMBL
Match:
A0A1S3CPF0 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503127 PE=4 SV=1)
HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 547/611 (89.53%), Postives = 571/611 (93.45%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAV+ SPD S PS FRKSH IPTSN LLFSLP SNL SLHLNSS PSPILEQ
Sbjct: 1 MAVSPSPDCSFPPSNSFRKSH---FIPTSNFPLLFSLPTSNLPSLHLNSSGFPSPILEQP 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIH +SNL DFQLP L NVEDLNDFLCGLSQN GTEDLIY+YYVKAKERAGFRPE
Sbjct: 61 SIALPDIHSNSNLHDFQLPPLSNVEDLNDFLCGLSQNPGTEDLIYDYYVKAKERAGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLI LVSRDFVD+GV PDRDTCS+LVSSCVRG KFKVVKALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLIFLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERDSDVA AFEAAMRGYNKLHMYKSTI+VFQRLKSARIEADSGCY RVMEAYLKLGD
Sbjct: 181 VFERDSDVAMTAFEAAMRGYNKLHMYKSTIMVFQRLKSARIEADSGCYFRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI + PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGIAEDYTI
Sbjct: 241 SERVMELFNEVESRISNLTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASI+EVKLAEDL+NEAKAKKLLRDPA+FLKLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIREVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGY+AAVKVYEKLI DGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYDAAVKVYEKLIGDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKASEFE CE+YYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKASEFEKCEQYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+ GIMVGVFSKTSRVDELVKLLRDM LEGTRLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 608
BLAST of CcUC01G007320 vs. ExPASy TrEMBL
Match:
A0A5A7VR01 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00670 PE=4 SV=1)
HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 569/611 (93.13%), Query Frame = 0
Query: 1 MAVTGSPDWSLTPSTFFRKSHLITLIPTSNLALLFSLPASNLRSLHLNSSDCPSPILEQS 60
MAV+ SPD S PS FRKSH IPTSN LLFSL SNL SLHLNSS PSPILEQ
Sbjct: 1 MAVSPSPDCSFPPSNSFRKSH---FIPTSNFPLLFSLSTSNLPSLHLNSSGFPSPILEQP 60
Query: 61 SIALPDIHLDSNLQDFQLPSLPNVEDLNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPE 120
SIALPDIH +SNL DFQLP L NVEDLNDFLCGLSQN GTEDLIY+YYVKAKERAGFRPE
Sbjct: 61 SIALPDIHSNSNLHDFQLPPLSNVEDLNDFLCGLSQNPGTEDLIYDYYVKAKERAGFRPE 120
Query: 121 KSTLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLE 180
KSTLRHL+RYLVRLKKWDLI LVSRDFVD+GV PDRDTCS+LVSSCVRG KFKVVKALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLIFLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKALLE 180
Query: 181 VFERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGD 240
VFERDSDVA FEAAMRGYNKLHMYKSTI+VFQRLKSARIEADSGCY RVMEAYLKLGD
Sbjct: 181 VFERDSDVALTTFEAAMRGYNKLHMYKSTIMVFQRLKSARIEADSGCYFRVMEAYLKLGD 240
Query: 241 FERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTI 300
ERV+ELF+EVESRI + PFSTKIYGILCESLAK GRVFESLEFFRDM+KKGIAEDYTI
Sbjct: 241 SERVMELFNEVESRISNLTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300
Query: 301 YSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMK 360
YSALICTFASI+EVKLAEDL+NEAKAKKLLRDPA+FLKLILM+IQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIREVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALEIVEVMK 360
Query: 361 DFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420
DFK+GVSDCIFCAIVNGYATRRGY+AAVKVYEKLI DGCEPGQVTYASAINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYDAAVKVYEKLIGDGCEPGQVTYASAINAYCRVGLYS 420
Query: 421 KAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480
Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGA 540
EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKASEFE CE+YYREFRMNGG
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKASEFEKCEQYYREFRMNGGT 540
Query: 541 IDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWL 600
IDKA+ GIMVGVFSKTSRVDELVKLLRDM LEGTRLD RLYRSALNAL+DAGLQVQAKWL
Sbjct: 541 IDKAIGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRSALNALMDAGLQVQAKWL 600
Query: 601 QDHYAGKSGYV 612
QDHYAGKSG+V
Sbjct: 601 QDHYAGKSGFV 608
BLAST of CcUC01G007320 vs. TAIR 10
Match:
AT5G13770.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 583.6 bits (1503), Expect = 1.9e-166
Identity = 306/580 (52.76%), Postives = 400/580 (68.97%), Query Frame = 0
Query: 27 PTSNLALLFSLPASNLRSLHLNSSDCPSPILEQSSIALPDIHLDSNLQDFQLPSLPNVED 86
PT + L P + H+ SS C S +LE+ P S +D P D
Sbjct: 24 PTKPIFFLSQKP----HNFHVCSSRC-SMVLEEDEKKSP-----SPKEDKWPFFEPGPND 83
Query: 87 LNDFLCGLSQNTGTEDLIYEYYVKAKERAGFRPEKSTLRHLVRYLVRLKKWDLILLVSRD 146
LN L ++ T L E+Y KAKE + R T +HL+ YLV K WDL++ V D
Sbjct: 84 LNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLVSVCED 143
Query: 147 FVDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLEVFERDSDVATAAFEAAMRGYNKLHMY 206
++ PD TCS L+ SC+R KF++ LL VF D +A +A +AAM+G+NKL MY
Sbjct: 144 LREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMY 203
Query: 207 KSTILVFQRLK-SARIEADSGCYCRVMEAYLKLGDFERVVELFDEVESRILDF-APFSTK 266
STI VF RLK S +E GCYCR+MEA+ K+G+ +VVELF E +S+ L F A S
Sbjct: 204 SSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGS 263
Query: 267 IYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASIQEVKLAEDLFNEA 326
IY I+C SLAK GR FE+LE +MK KGI E +YS LI FA +EV + E LF EA
Sbjct: 264 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 323
Query: 327 KAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIFCAIVNGYATRRGY 386
KKLL+DP + LK++LM++++G++E LE+V M+ ++ V+DCI CAIVNG++ +RG+
Sbjct: 324 GGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGF 383
Query: 387 NAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMFREMEEKGFDKCVVAYSSL 446
AVKVYE +++ CE GQVTYA AINAYCR+ Y+KAE +F EM +KGFDKCVVAYS++
Sbjct: 384 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 443
Query: 447 ISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKI 506
+ MYGKT RL DA+RL+AKMK+RGC+PN+WIYN L++MHG+A +L++ EK+WKEMKR K+
Sbjct: 444 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 503
Query: 507 APDKVSYTSIISAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELVK 566
PDKVSYTS+ISAY ++ E E C Y+EFRMN G ID+AMAGIMVGVFSKTSR+DEL++
Sbjct: 504 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMR 563
Query: 567 LLRDMNLEGTRLDGRLYRSALNALIDAGLQVQAKWLQDHY 605
LL+DM +EGTRLD RLY SALNAL DAGL Q +WLQ+ +
Sbjct: 564 LLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESF 589
BLAST of CcUC01G007320 vs. TAIR 10
Match:
AT2G32630.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 146.7 bits (369), Expect = 5.9e-35
Identity = 105/445 (23.60%), Postives = 204/445 (45.84%), Query Frame = 0
Query: 148 VDYGVSPDRDTCSRLVSSCVRGGKFKVVKALLEVFER--DSDVATAAFE--AAMRGYNKL 207
V G+S D +C + V K + + LE+F R DS V + + G +
Sbjct: 181 VKKGLSIDERSC---IVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRR 240
Query: 208 HMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVESRILDFAPFST 267
+ + + + I+ ++ Y ++ AY+K DF V + ++ D ++
Sbjct: 241 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK---DGVVYNK 300
Query: 268 KIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASIQEVKLAEDLFNE 327
Y +L E K G++ ++ + F +M+++GI D +Y++LI +K A LF+E
Sbjct: 301 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 360
Query: 328 AKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIFCAIVNGYATRRG 387
K L + LI + G + A ++ M+ V ++ +F +++GY +
Sbjct: 361 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 420
Query: 388 YNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMFREMEEKGFDKCVVAYSS 447
+ A +Y+ + + G + T + + + R+ Y +A+ M E G V+Y++
Sbjct: 421 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 480
Query: 448 LISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKK 507
LI +Y K G +++A RL +M +G QPN YN+++ + K +K+ KL M+
Sbjct: 481 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 540
Query: 508 IAPDKVSYTSIISAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELV 567
+ PD +YTS+I A + R + E + G + +M+ SK + DE
Sbjct: 541 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 600
Query: 568 KLLRDMNLEGTRLDGRLYRSALNAL 589
L +M +G +D ++Y + + ++
Sbjct: 601 GLYDEMKRKGYTIDNKVYTALIGSM 619
BLAST of CcUC01G007320 vs. TAIR 10
Match:
AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 145.2 bits (365), Expect = 1.7e-34
Identity = 98/415 (23.61%), Postives = 191/415 (46.02%), Query Frame = 0
Query: 193 FEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVE 252
F + Y + YK ++ +L +R Y +++AY G ER + E++
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 253 SRILDFAPFSTKIYGILCESLAK-LGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASI 312
+ + +Y E L K G E+++ F+ MK+ Y+ +I +
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 313 QEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIF 372
+ ++ L+ E ++ + + + L+ ++G EKA EI E +++ + ++
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337
Query: 373 CAIVNGYATRRGY-NAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMF---- 432
A++ Y +R GY A +++ + GCEP + +Y ++AY R GL+S AE +F
Sbjct: 338 NALMESY-SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 397
Query: 433 -------------------------------REMEEKGFDKCVVAYSSLISMYGKTGRLK 492
+EM E G + +S++++YG+ G+
Sbjct: 398 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 457
Query: 493 DAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 552
++LA+M+ C ++ YNIL+ ++GKA L+++E+L+ E+K K PD V++TS I
Sbjct: 458 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 517
Query: 553 SAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELVKLLRDMN 571
AY + + C + E +G A D A +++ S +V+++ +LR M+
Sbjct: 518 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
BLAST of CcUC01G007320 vs. TAIR 10
Match:
AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 145.2 bits (365), Expect = 1.7e-34
Identity = 98/415 (23.61%), Postives = 191/415 (46.02%), Query Frame = 0
Query: 193 FEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLGDFERVVELFDEVE 252
F + Y + YK ++ +L +R Y +++AY G ER + E++
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 253 SRILDFAPFSTKIYGILCESLAK-LGRVFESLEFFRDMKKKGIAEDYTIYSALICTFASI 312
+ + +Y E L K G E+++ F+ MK+ Y+ +I +
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 313 QEVKLAEDLFNEAKAKKLLRDPAVFLKLILMHIQQGSLEKALEIVEVMKDFKVGVSDCIF 372
+ ++ L+ E ++ + + + L+ ++G EKA EI E +++ + ++
Sbjct: 300 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 359
Query: 373 CAIVNGYATRRGY-NAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDMF---- 432
A++ Y +R GY A +++ + GCEP + +Y ++AY R GL+S AE +F
Sbjct: 360 NALMESY-SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 419
Query: 433 -------------------------------REMEEKGFDKCVVAYSSLISMYGKTGRLK 492
+EM E G + +S++++YG+ G+
Sbjct: 420 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 479
Query: 493 DAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 552
++LA+M+ C ++ YNIL+ ++GKA L+++E+L+ E+K K PD V++TS I
Sbjct: 480 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 539
Query: 553 SAYVKASEFETCERYYREFRMNGGAIDKAMAGIMVGVFSKTSRVDELVKLLRDMN 571
AY + + C + E +G A D A +++ S +V+++ +LR M+
Sbjct: 540 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 593
BLAST of CcUC01G007320 vs. TAIR 10
Match:
AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 144.4 bits (363), Expect = 2.9e-34
Identity = 109/470 (23.19%), Postives = 207/470 (44.04%), Query Frame = 0
Query: 122 STLRHLVRYLVRLKKWDLILLVSRDFVDYGVSPDRDTCSRLVSSCVRGGKF-KVVKALLE 181
+ L LV+ L R K L V P T + ++ ++ G+ KV + E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 182 VF-ERDSDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSARIEADSGCYCRVMEAYLKLG 241
+ E D T + A + Y KL S I +F +K ++ Y ++ Y K+G
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 242 DFERVVELFDEVESRILDFAPFSTKIYGILCESLAKLGRVFESLEFFRDMKKKGIAEDYT 301
E+ ++LF+E++ ++ Y L + L K GRV E+ F++DM + G+ D
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYT---YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 342
Query: 302 IYSALICTFASIQEVKLAEDLFNEAKAKKLLRDPAVFLKLI-LMHIQQGSLEKALEIVEV 361
+ L+ + V+ ++F+E + + +I + + + + +
Sbjct: 343 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 402
Query: 362 MKDFKVGVSDCIFCAIVNGYATRRGYNAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGL 421
MK V S+ + +++GY A+ + E++ E G P Y S INA +
Sbjct: 403 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 462
Query: 422 YSKAEDMFREMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNI 481
Y A ++F+E++E + Y+ +I +GK G+L +A+ L +MK +G P+V+ YN
Sbjct: 463 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 522
Query: 482 LMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFETCERYYREFRMNG 541
LM KA + + L ++M+ D S+ I++ + + + + +G
Sbjct: 523 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 582
Query: 542 GAIDKAMAGIMVGVFSKTSRVDELVKLLRDMNLEGTRLDGRLYRSALNAL 589
D ++G F+ +E +++R+M +G D Y S L+A+
Sbjct: 583 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038874313.1 | 0.0e+00 | 92.80 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... | [more] |
XP_004151188.1 | 0.0e+00 | 89.20 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucumis sa... | [more] |
XP_022938691.1 | 0.0e+00 | 89.36 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucurbita ... | [more] |
XP_022993436.1 | 0.0e+00 | 89.20 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... | [more] |
XP_008465506.1 | 0.0e+00 | 89.53 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic ... | [more] |
Match Name | E-value | Identity | Description | |
Q66GP4 | 2.7e-165 | 52.76 | Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop... | [more] |
Q76C99 | 2.3e-36 | 21.95 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Q8S8P6 | 8.3e-34 | 23.60 | Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX... | [more] |
O82178 | 2.4e-33 | 23.61 | Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... | [more] |
Q9LW84 | 4.1e-33 | 23.19 | Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KPV8 | 0.0e+00 | 89.20 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114580 PE=4 SV=1 | [more] |
A0A6J1FDV4 | 0.0e+00 | 89.36 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucurbit... | [more] |
A0A6J1JWB4 | 0.0e+00 | 89.20 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... | [more] |
A0A1S3CPF0 | 0.0e+00 | 89.53 | pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucumis ... | [more] |
A0A5A7VR01 | 0.0e+00 | 89.20 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G13770.1 | 1.9e-166 | 52.76 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G32630.1 | 5.9e-35 | 23.60 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G35130.1 | 1.7e-34 | 23.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G35130.2 | 1.7e-34 | 23.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G16010.1 | 2.9e-34 | 23.19 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |