CcUC01G006560 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCTGATGAAGCTGATATGAAATTTCTCCTATTTTCCAGTGATTTTGTTGAGGTTTTTGGCTCGAGGGAGAGGGACTCTAAATTCGGGAATACGAATATGCGCGCCGTCGAAAGAGAAGATTCTTTTCAGTAATTCGCATCTCCTTTTTTCTTATTCCCTTTCTCACCAGTTTCCAACTTCCCTGAATCTCGTCCCTGTAATCACCGCGCCTCAGCTGATGAGCTGAATCTCGCCGCCGCGGCATCTCAATATATTGCTCCTCTTCTTCAGGTTTTCCCTTCTTACCTCTATGATCATGTGGATGCTGTGTTCGTGAATTGAGTTTTTTTATTTTTTTTATTTTTATTTTTTTCCCCCTTTCATATCTCCGATTTCTTTCCCTCTTTCAATGCCGAATGCTTTCTGGGTTTTAGTTGTTTTTGTGTTCTGGTTCCTGAAATGTCGAATTTTGGAAACCTCATATGAATTCCTATGGTCTTAAGTGCGTGTTTGGTAATGCCGATAAGGTGTTCGATAATATTCATTGTATTTGTATTCATCCATCTTAATTCCAAACTAAGATTGCAATAATAAAAATAAGATTGAATAATGAGCATGTATTCATGGTTTAACTTTGAATTTTGATTTGTGGGGTGTTTGGTGATTCGTGTGGGGTATTAATTATGGAGGTACACAAGCCCTGAGATACACAGCTGTTATGTTGCTACTACCAACTAACATGAAAACCAATCCTGCTATTTGTAAGGATAAAAAGTTTGCCAAATTTCTCTCTTTGAAAAGATCTCCACCTCCCCCCCTCATTAACAAGGTTATTGAATTGAGTTGTCCTTGATTAAACAGTGATTCGCTAATAGAAGTAAGATCACGTAGGCAGTGGAAACAGTTAGCTATCAAGTTTCGTTTCTATTCACCAAAGGCAGAGAAATATGCAAGTGTTAATGGGTTCCTTTCTGTATTTATTTTATATTTCTTGGAATGTTTATTTCTTCAAAGGAAGATTTGATTTAGAAGTAAGTTATTTTGTTAATATATATAGCAACTGTAACTGAAGTAACTGTGATTTTTACCTGTGCAGTTCAACATAGGAGTTTGCACTGGACATAGTTATTTTGTTCAATGCCAGCAGATTCTTGCTGGCATTGAGAATGATTCAGCTTATTACTGAAACTTTGATGGGTATCCAGAATAAACCAAACTCTAGTAGAGCCCTTAAAGGTCTGCATGGGGTTACTATCATGCCTGATTCCCAATTCGCGTTGGAAAAGACTACACAAGATGGGGAGTTTTCTCAGTTGAGTTGTGGGAATTCAGCTACAAGTGGGAATCAGCCATTGCTAAAGCAGTAAGTTGACATGAAAACTGATAGAACTCAATATTATTTATCCACAAACAGCGTACAAGATTTGGATGTTTAGAGAGCTCCCCTCTCTCCAGCTTGGCAAACACTAATTGCCAAAAGTATAATCTCCTTGGATATTTTCCCTCTCTCTATACCCCTGCCCTCATGACTTCTCTCATGCCCCTATGTTACATTATTCGCTTTCGGTTACAATATTGAGCCTGCCAAAGCTAACTATCAATCTAAGTTCCACCTCCCCGATCACTTTTATTATTGAAACCACTAAACCATATAATGATGAGGTAACTGTAATTTATCCTAGTGCACAGTCTGACTTCCACAAGCTTTATCAACTGTACATAATAAAGTGAATAACGAGATGTCACCATACCATGGTATTAACGGTTTTTTCATGATCTTCAGATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTATAGTCTTAAAATTGCTTCACCTTCGTAGTATGTTTTCTTGAATTGAGATTTGTTCTTCGACATCATCTCCCAAGGCAGCTCCAAGAGACAAAAGCTAATAAGTTTTCTATGAGGCTTGAACCTAGGACTTAGAGAGTATCTCTAAACATCCCAAGGCCTTACCACTAAGACAACCTTGAGCTCCGTTCTTTAGCATTATTTATAAGTGGTTCCCTCCTTCATTTGGTTGGTAGGTGATCGGAATATGGCAGAGAGGGTGGCTAACGTCCTTACCTCACTTCCTTTTATTGCTCTTGGAATCCAGGCACCTAGGTGATTACTGCTGAACGTTTTCTTGCAATAATAGATATCTGTCTAGGTGCTTGTCTGATTATTTGCCTATTACTTCGGGGACAGGAGGAATTTCCCAATGAAGCTATATGCTAACTCATTGATCGGAGTAGGAGTTGCCTCAAGTTTATATCATTCTTCTAGAGGAAAAGTGAGACAATACCTAAGATGGGCAGACTACACAATGATAGCTGCAGCCACGGTGGTAAGTTAAAAATGGATTTGTGTATTGAAATAAGACAAGAAGGAGGTTACCAACTCAAATAAGGCATAAAATTTGCTAATGTGGGATATGATAATTCTCTCTAGTGTTATGTATGATTAGATGATTTACTTTGAGTTCCTTTTCTACGTGTTTTTGAAGCTTATGATGTCCAGAACAATGCTGGATATACTGATATTCAATATCCTCCGGTATCTCTGAATATCGGTGCTACTGAATAAAAGATATTTAGCTTCTACTTGTGAAGTTTAAGTTTTGATTGGTTTTCTCTGTCTTCCCTTAATTTAAAAGAACAGAAGACCTTTGTAATCACATTTATATTACTGTTATTTACTGATTTTTCAACCTGAGATGCTTGGATTTTCTCATGTCTCAATTGATGTTTTGGAAGTAGTTTCTAGAACCAAACTTTCAATGTTTGAAACATAAACAATAACAAAATTATAAGATAAATCAAGTGTTCGAGGTACGTGGACCCTCCCTCTTTTAAAATCTCCTTTCAGTCCCTAAATCATTCACAAAAATATTACCTACCTCTTCTGATCTCACTCAATGTATTTATAACCAAATTTCTCTAACAAACCCTTAAACTAATTAGTTACATACCCTTAGTGCCTACTAATATCCCCAATTCTATCCTAATAGCATTCTTAACCCTATCTTGCAGTGTCTTACAAGAGCTCTAAAAAACGACAACCCGAGATTGTTGATGGCTGCATCTGCACTTCTATTGCCTTTGAGACCTTTTACGGTTTCTGCTCTTCACACTGGGATGATGGAGGTAACTTTTTGGTGTCACTTTTATGTACAGCTCATTCCTTTGCTCATTGATCAATATGGGTTGGTTCTGTATATTTCTAAAGTCAATTGGCAGCATTCTATAGGAAGACTTGTAGGATGAAGCTCGATTTATTGATTATTCCTGAGAATTCCTGTCCATTGGCTCAACTGTTTTCTTATACGATTTTAAATGCCGATGGATTCGATCATTGCTGTACCTTATCTTTCTGTTAAGGACAAAGTGACTCCTTTCCATTTGCATAGTTGGCCTGTTTCCTCAACCTTTAGTATCTTCACTACTATGAAATAAGTAATTTTCATTTTCAATCATGAGTAGACTATTAATATTTGTTAATGGTTTACTGATGTATATTTTCATTTTAAAACTCAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAACGTGCATAAAATGTCAACGTTGTTAGGTGGTGTTCTTTTTATTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTAATGACAAACATAAATTCGTCGACGTTCCGGTCTTGCTTTCTTGGAGAACAGCAATATACACAATGAAGATTCTTAGTTGGTCGTTATGTATTTGTCATCCAGGTTCGATCAACAATCAACTCTATTAGATTAGTTTCTCGCTCAAATTCTTGTTCCCTTGGAACTTCAACTAATTCAGGACTAAACAAGAATAGCTCCGTGAAATAGTTTGTGTTGAAAAGGGCTGACATTATAGCCATTGTTTATGATTAATCCCAGAAGAAAATGTTTTAGTTTGATTAGAGGTGGAATATTTATTGGATTCTCATGGGCTTGTTCTAAATAGAAACAAAGGTTAAATTGCAAGTTTGGACGCTAAAATAAA GCCCTGATGAAGCTGATATGAAATTTCTCCTATTTTCCAGTGATTTTGTTGAGGTTTTTGGCTCGAGGGAGAGGGACTCTAAATTCGGGAATACGAATATGCGCGCCGTCGAAAGAGAAGATTCTTTTCAGTAATTCGCATCTCCTTTTTTCTTATTCCCTTTCTCACCAGTTTCCAACTTCCCTGAATCTCGTCCCTGTAATCACCGCGCCTCAGCTGATGAGCTGAATCTCGCCGCCGCGGCATCTCAATATATTGCTCCTCTTCTTCAGTTCAACATAGGAGTTTGCACTGGACATAGTTATTTTGTTCAATGCCAGCAGATTCTTGCTGGCATTGAGAATGATTCAGCTTATTACTGAAACTTTGATGGGTATCCAGAATAAACCAAACTCTAGTAGAGCCCTTAAAGGTCTGCATGGGGTTACTATCATGCCTGATTCCCAATTCGCGTTGGAAAAGACTACACAAGATGGGGAGTTTTCTCAGTTGAGTTGTGGGAATTCAGCTACAAGTGGGAATCAGCCATTGCTAAAGCAATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATGGCAGAGAGGGTGGCTAACGTCCTTACCTCACTTCCTTTTATTGCTCTTGGAATCCAGGCACCTAGGAGGAATTTCCCAATGAAGCTATATGCTAACTCATTGATCGGAGTAGGAGTTGCCTCAAGTTTATATCATTCTTCTAGAGGAAAAGTGAGACAATACCTAAGATGGGCAGACTACACAATGATAGCTGCAGCCACGGTGAACAATGCTGGATATACTGATATTCAATATCCTCCGTGTCTTACAAGAGCTCTAAAAAACGACAACCCGAGATTGTTGATGGCTGCATCTGCACTTCTATTGCCTTTGAGACCTTTTACGGTTTCTGCTCTTCACACTGGGATGATGGAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAACGTGCATAAAATGTCAACGTTGTTAGGTGGTGTTCTTTTTATTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTAATGACAAACATAAATTCGTCGACGTTCCGGTCTTGCTTTCTTGGAGAACAGCAATATACACAATGAAGATTCTTAGTTGGTCGTTATGTATTTGTCATCCAGGTTCGATCAACAATCAACTCTATTAGATTAGTTTCTCGCTCAAATTCTTGTTCCCTTGGAACTTCAACTAATTCAGGACTAAACAAGAATAGCTCCGTGAAATAGTTTGTGTTGAAAAGGGCTGACATTATAGCCATTGTTTATGATTAATCCCAGAAGAAAATGTTTTAGTTTGATTAGAGGTGGAATATTTATTGGATTCTCATGGGCTTGTTCTAAATAGAAACAAAGGTTAAATTGCAAGTTTGGACGCTAAAATAAA ATGATTCAGCTTATTACTGAAACTTTGATGGGTATCCAGAATAAACCAAACTCTAGTAGAGCCCTTAAAGGTCTGCATGGGGTTACTATCATGCCTGATTCCCAATTCGCGTTGGAAAAGACTACACAAGATGGGGAGTTTTCTCAGTTGAGTTGTGGGAATTCAGCTACAAGTGGGAATCAGCCATTGCTAAAGCAATGGGTATGGGAGCAAAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATGGCAGAGAGGGTGGCTAACGTCCTTACCTCACTTCCTTTTATTGCTCTTGGAATCCAGGCACCTAGGAGGAATTTCCCAATGAAGCTATATGCTAACTCATTGATCGGAGTAGGAGTTGCCTCAAGTTTATATCATTCTTCTAGAGGAAAAGTGAGACAATACCTAAGATGGGCAGACTACACAATGATAGCTGCAGCCACGGTGAACAATGCTGGATATACTGATATTCAATATCCTCCGTGTCTTACAAGAGCTCTAAAAAACGACAACCCGAGATTGTTGATGGCTGCATCTGCACTTCTATTGCCTTTGAGACCTTTTACGGTTTCTGCTCTTCACACTGGGATGATGGAGGTAATATTTGCAAAAAGAGCTTTGAAGGATCCAGATTTAAGGATGGCTCACAACGTGCATAAAATGTCAACGTTGTTAGGTGGTGTTCTTTTTATTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTAA MIQLITETLMGIQNKPNSSRALKGLHGVTIMPDSQFALEKTTQDGEFSQLSCGNSATSGNQPLLKQWVWEQRPSCLRPVGGCIQGDRNMAERVANVLTSLPFIALGIQAPRRNFPMKLYANSLIGVGVASSLYHSSRGKVRQYLRWADYTMIAAATVNNAGYTDIQYPPCLTRALKNDNPRLLMAASALLLPLRPFTVSALHTGMMEVIFAKRALKDPDLRMAHNVHKMSTLLGGVLFIADDALPQTPFIHAAWHLAAAVGVGTCNKLLE Homology
BLAST of CcUC01G006560 vs. NCBI nr
Match: XP_038906666.1 (uncharacterized protein LOC120092600 [Benincasa hispida] >XP_038906667.1 uncharacterized protein LOC120092600 [Benincasa hispida]) HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133 Identity = 247/270 (91.48%), Postives = 251/270 (92.96%), Query Frame = 0
BLAST of CcUC01G006560 vs. NCBI nr
Match: KAA0046324.1 (uncharacterized protein E6C27_scaffold149G00330 [Cucumis melo var. makuwa] >TYK30488.1 uncharacterized protein E5676_scaffold426G00310 [Cucumis melo var. makuwa]) HSP 1 Score: 482.6 bits (1241), Expect = 2.2e-132 Identity = 243/270 (90.00%), Postives = 249/270 (92.22%), Query Frame = 0
BLAST of CcUC01G006560 vs. NCBI nr
Match: XP_008467131.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 [Cucumis melo]) HSP 1 Score: 480.7 bits (1236), Expect = 8.2e-132 Identity = 242/270 (89.63%), Postives = 248/270 (91.85%), Query Frame = 0
BLAST of CcUC01G006560 vs. NCBI nr
Match: XP_004150596.1 (uncharacterized protein LOC101204891 [Cucumis sativus] >KGN51493.1 hypothetical protein Csa_009382 [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 9.1e-131 Identity = 239/270 (88.52%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of CcUC01G006560 vs. NCBI nr
Match: KAG7032579.1 (hypothetical protein SDJN02_06628, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 464.5 bits (1194), Expect = 6.1e-127 Identity = 229/269 (85.13%), Postives = 246/269 (91.45%), Query Frame = 0
BLAST of CcUC01G006560 vs. ExPASy TrEMBL
Match: A0A5D3E3V3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00310 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132 Identity = 243/270 (90.00%), Postives = 249/270 (92.22%), Query Frame = 0
BLAST of CcUC01G006560 vs. ExPASy TrEMBL
Match: A0A1S3CT02 (LOW QUALITY PROTEIN: uncharacterized protein LOC103504559 OS=Cucumis melo OX=3656 GN=LOC103504559 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 4.0e-132 Identity = 242/270 (89.63%), Postives = 248/270 (91.85%), Query Frame = 0
BLAST of CcUC01G006560 vs. ExPASy TrEMBL
Match: A0A0A0KPJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570380 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 4.4e-131 Identity = 239/270 (88.52%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of CcUC01G006560 vs. ExPASy TrEMBL
Match: A0A6J1H9F5 (uncharacterized protein LOC111460821 OS=Cucurbita moschata OX=3662 GN=LOC111460821 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.9e-127 Identity = 229/269 (85.13%), Postives = 246/269 (91.45%), Query Frame = 0
BLAST of CcUC01G006560 vs. ExPASy TrEMBL
Match: A0A6J1JJG8 (uncharacterized protein LOC111487494 OS=Cucurbita maxima OX=3661 GN=LOC111487494 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 5.0e-127 Identity = 229/269 (85.13%), Postives = 246/269 (91.45%), Query Frame = 0
BLAST of CcUC01G006560 vs. TAIR 10
Match: AT1G23110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-91 Identity = 162/261 (62.07%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CcUC01G006560 vs. TAIR 10
Match: AT1G23110.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-91 Identity = 162/261 (62.07%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CcUC01G006560 vs. TAIR 10
Match: AT1G23110.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-91 Identity = 162/261 (62.07%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CcUC01G006560 vs. TAIR 10
Match: AT1G23110.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1). ) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-91 Identity = 162/261 (62.07%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CcUC01G006560 vs. TAIR 10
Match: AT1G23110.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1). ) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-91 Identity = 162/261 (62.07%), Postives = 198/261 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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