CcUC01G005990 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGTGTGTGGTTACAGAGATGGGAAGGCGCATGGGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAACGAAGAGGAGCGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTTACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGTGCGGAGAAGAGGAGGGAGAGGCGGTGAGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGGTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATCTTCGATTTGGAAACAACACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGACGGAACAAATGTGA ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGTGTGTGGTTACAGAGATGGGAAGGCGCATGGGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAACGAAGAGGAGCGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTTACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGTGCGGAGAAGAGGAGGGAGAGGCGGTGAGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGGTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATCTTCGATTTGGAAACAACACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGACGGAACAAATGTGA ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGAGGCGTGTGTGGTTACAGAGATGGGAAGGCGCATGGGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAACGAAGAGGAGCGGCGGGGGAGGAAGGCGGAGGAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTTACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAGGTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGTGCGGAGAAGAGGAGGGAGAGGCGGTGAGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGGTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGCATTGGAGAGTTGTGTGAGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATCTTCGATTTGGAAACAACACTGAAATGCGTAAAACTAAGAAAACACGGATGAGGACGGAACAAATGTGA MDFGSRKRLQCGGFFGEEAGGEGAISVRVKVSAGGVEACVVTEMGRRMGEETAVRVVAVKRRERRGAAGEEGGGGRVLRAVAAGGAFYPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGECGEEEGEAVSVGGEGLGRGGEGGFMEEGELQIVGGGGIGIGIGELCEREEKKNEMEEGGNGERCWLHLRFGNNTEMRKTKKTRMRTEQM Homology
BLAST of CcUC01G005990 vs. NCBI nr
Match: KAF7827865.1 (glycine-rich cell wall structural protein 1.0-like [Senna tora]) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-20 Identity = 76/144 (52.78%), Postives = 92/144 (63.89%), Query Frame = 0
BLAST of CcUC01G005990 vs. NCBI nr
Match: KAB8681452.1 (hypothetical protein FH972_026331 [Carpinus fangiana]) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07 Identity = 66/149 (44.30%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of CcUC01G005990 vs. NCBI nr
Match: KDO70110.1 (hypothetical protein CISIN_1g029800mg [Citrus sinensis]) HSP 1 Score: 67.0 bits (162), Expect = 2.4e-07 Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of CcUC01G005990 vs. NCBI nr
Match: GAY47055.1 (hypothetical protein CUMW_101650 [Citrus unshiu]) HSP 1 Score: 67.0 bits (162), Expect = 2.4e-07 Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of CcUC01G005990 vs. NCBI nr
Match: XP_011468691.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-05 Identity = 46/93 (49.46%), Postives = 53/93 (56.99%), Query Frame = 0
BLAST of CcUC01G005990 vs. ExPASy TrEMBL
Match: A0A1D1YVI8 (Uncharacterized protein (Fragment) OS=Anthurium amnicola OX=1678845 GN=g.22794 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.2e-08 Identity = 48/94 (51.06%), Postives = 59/94 (62.77%), Query Frame = 0
BLAST of CcUC01G005990 vs. ExPASy TrEMBL
Match: A0A5N6L4M9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_026331 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.8e-08 Identity = 66/149 (44.30%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of CcUC01G005990 vs. ExPASy TrEMBL
Match: A0A067FVC2 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029800mg PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of CcUC01G005990 vs. ExPASy TrEMBL
Match: A0A2H5P4P8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101650 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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