CcUC01G005010 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGATCCAAAGAATAAAAAATCGAAAACCGGTCCAAGTCAGTTGGTTCGTCTTGGTTTCTCAGTTTTTGATTATAATTATTATTAGAAATTCCGGATGCGGAGTCAAAACCATAATGGAAAGTGCTTTTGGAAACACTTTTCGTTGCTTTATGAAAAGTTTAAGTTAGAATTAGGAAGCACTTTCCGTCCAACTGCTTGACTGGAAAGCACCTTAGAGAAGAAAAAAAAAAAAAAAACTGTTATACCAAACATTCCCAACTCTAATTGATTCTTCCTCCATTCACTTCTGCCCTAATTTCTCACTTTCTTCCTTCACTTGCTTCAAATCTACCACTGGCTTCCTCTACTCCGCTCCAGATACTCCATTGTTGACACTCTCTTCTTCAGGTGCGCTTCTAATTTTTGGTTTCTTTTAGAGTCATCATGAAATCCATTCCGTTTTGCTGTGATCTTGTTAGAAAGGAACAATATCAGAAAATCTATGACAAATATTACTAATCGCGTTCGAATTGTGTATTATTTGTTACTATTAACTCTATTTTGCCTCCTAGTATTGTAATTTTCTCTCATTTTGAGTCCCTCTTAGTTCGATTTCCCCTTTTTTGGTTGTTCTTATCACTGATCTTCTTTGTTTCTCATTGTTCAAATTCTCTTCGCAGTACTTTTAGTAATAAAATCCAATAGTTACCGAACACTAAAGCTTTTATAGAAATGTGTTCTTTCTGAAGCCCATGCTATCAGAAGAGAAGATAGAGGAAGCTTTATGAACATAGAGAATTGGGATTCTGTTTTAGATATTTTGTAAACAGGGGACTACTACTCTCTTTGTGGATCTATACTGATAATGAAACTGAAATTACATCAATTCCTTGCCATTTTCTTTATGGTTTATTTGAGATTCAAGTTTATATCCCTTCTTTAAATCCTTATTTCAATGAAACTTTATCTAACGGAAAGGATGAACTGCTACTGGGTCACAGGGAAGATAGTATAATTTCTAGATAGTATAATTTCTTGCTTTTTACATCTCAAATTTGTCTATATCTTCCAATTTTCATCTCTAGTCTTTACTGTTTTTAAGCTAACTATGTAAAACTGATTCAAATTACCTTTTTCCTATTATTAATGTGTTAGAATGTCCAAGAGTTTAACAACTAGTGATGAAAAAGAGAAGCAGACAAAGGCTATTTGGGATGATGTTACTGTTGATTCGTTCATAAATGTTTGTGTTACTGAGACGCTAAATGGGAATAGGCCTCGTGGTTATTTTACAAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACTGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAGAGATTGGCAAGTCTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGATCCTCTAAGGCAAACCATTGATGCTAGTAGTCAATGGTGGGATCACAAGTTAAAGGTATTCTTTCCTGAATTTGTATTTGTATAACAATTTTAAATTTGAATGCAACTAGTTATGAAGTTGTTCGTTGATTTGTTATTTTTGTAGGTTCTTCCTGAGGCAGCCAAGTTTCAAGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGCCAATGGAGGAGCTTGGGCCCCAACCCCATCTCAAGTTGTTTTACGCAAGGCTACAAGTGATGGGATTGAAGATTATAATGATGACACAATAGGAGACACAAAATTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACATGAATGAAGTGAATACTAGTGCGACTTATACTCAAGGGAGTGAGAAAAGGAGGAAAAAAGTAGATTCAAAGGTTGGATCACCTTGTAGGTTGTTTGGTGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCGGGATGTAGTACTCTTGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTATAGAAGGTGATGAATTATATATGAAAGCCGCAGATATTCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACGAAAGCCTGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGACACTATACTAATTTCACAATAGGATTGTAAATTTTGTGTATTTAAAAAAAAATATATATATATATATATATATATATATCTTAGCCTTAGTGGAGATTTAGTTTCATTTCGTTCTTCCATTGTTGTTAAATCTCTTTGTCTAGTTAGACATAATACTATAAGATTATACAATCATTTTAGTAAAGTTTAAGATTAATGATTTTCTTGTTGAGAGATGTCTTACATGTTTAAGATAGTTACTAGCAGTATCTTTTTAGATGATCGTGACACGTTCGATGATTTAGTGTAAGGTAGTAAATGTTGATAAAAAACTATGGAAAACTTTATTCCATGTTTGTTAGAAGATTTTGAATGG CGAAGATCCAAAGAATAAAAAATCGAAAACCGGTCCAAGTCAGTTGGTTCGTCTTGGTTTCTCAGTTTTTGATTATAATTATTATTAGAAATTCCGGATGCGGAGTCAAAACCATAATGGAAAGTGCTTTTGGAAACACTTTTCGTTGCTTTATGAAAAGTTTAAGTTAGAATTAGGAAGCACTTTCCGTCCAACTGCTTGACTGGAAAGCACCTTAGAGAAGAAAAAAAAAAAAAAAACTGTTATACCAAACATTCCCAACTCTAATTGATTCTTCCTCCATTCACTTCTGCCCTAATTTCTCACTTTCTTCCTTCACTTGCTTCAAATCTACCACTGGCTTCCTCTACTCCGCTCCAGATACTCCATTGTTGACACTCTCTTCTTCAGAATGTCCAAGAGTTTAACAACTAGTGATGAAAAAGAGAAGCAGACAAAGGCTATTTGGGATGATGTTACTGTTGATTCGTTCATAAATGTTTGTGTTACTGAGACGCTAAATGGGAATAGGCCTCGTGGTTATTTTACAAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACTGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAGAGATTGGCAAGTCTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGATCCTCTAAGGCAAACCATTGATGCTAGTAGTCAATGGTGGGATCACAAGTTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCAAGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGCCAATGGAGGAGCTTGGGCCCCAACCCCATCTCAAGTTGTTTTACGCAAGGCTACAAGTGATGGGATTGAAGATTATAATGATGACACAATAGGAGACACAAAATTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACATGAATGAAGTGAATACTAGTGCGACTTATACTCAAGGGAGTGAGAAAAGGAGGAAAAAAGTAGATTCAAAGGTTGGATCACCTTGTAGGTTGTTTGGTGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCGGGATGTAGTACTCTTGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTATAGAAGGTGATGAATTATATATGAAAGCCGCAGATATTCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACGAAAGCCTGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGACACTATACTAATTTCACAATAGGATTGTAAATTTTGTGTATTTAAAAAAAAATATATATATATATATATATATATATATCTTAGCCTTAGTGGAGATTTAGTTTCATTTCGTTCTTCCATTGTTGTTAAATCTCTTTGTCTAGTTAGACATAATACTATAAGATTATACAATCATTTTAGTAAAGTTTAAGATTAATGATTTTCTTGTTGAGAGATGTCTTACATGTTTAAGATAGTTACTAGCAGTATCTTTTTAGATGATCGTGACACGTTCGATGATTTAGTGTAAGGTAGTAAATGTTGATAAAAAACTATGGAAAACTTTATTCCATGTTTGTTAGAAGATTTTGAATGG ATGTCCAAGAGTTTAACAACTAGTGATGAAAAAGAGAAGCAGACAAAGGCTATTTGGGATGATGTTACTGTTGATTCGTTCATAAATGTTTGTGTTACTGAGACGCTAAATGGGAATAGGCCTCGTGGTTATTTTACAAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACTGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAGAGATTGGCAAGTCTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGATCCTCTAAGGCAAACCATTGATGCTAGTAGTCAATGGTGGGATCACAAGTTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCAAGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGCCAATGGAGGAGCTTGGGCCCCAACCCCATCTCAAGTTGTTTTACGCAAGGCTACAAGTGATGGGATTGAAGATTATAATGATGACACAATAGGAGACACAAAATTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACATGAATGAAGTGAATACTAGTGCGACTTATACTCAAGGGAGTGAGAAAAGGAGGAAAAAAGTAGATTCAAAGGTTGGATCACCTTGTAGGTTGTTTGGTGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCGGGATGTAGTACTCTTGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTATAGAAGGTGATGAATTATATATGAAAGCCGCAGATATTCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACGAAAGCCTGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGA MSKSLTTSDEKEKQTKAIWDDVTVDSFINVCVTETLNGNRPRGYFTKIGWRNVVKNFYEKTGRNYGYKQLKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDASSQWWDHKLKVLPEAAKFQAKGLQNVELLNILFKDVAANGGAWAPTPSQVVLRKATSDGIEDYNDDTIGDTKFNENEFNNVESNMNEVNTSATYTQGSEKRRKKVDSKVGSPCRLFGALDRLCDAIEYRRRDLPGCSTLEVMETLRGLPGIIEGDELYMKAADILIKRENREMFVALRKPAIQITWLKQKRV Homology
BLAST of CcUC01G005010 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida]) HSP 1 Score: 568.2 bits (1463), Expect = 4.3e-158 Identity = 277/297 (93.27%), Postives = 286/297 (96.30%), Query Frame = 0
BLAST of CcUC01G005010 vs. NCBI nr
Match: XP_008436966.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KAA0055085.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153 Identity = 271/297 (91.25%), Postives = 281/297 (94.61%), Query Frame = 0
BLAST of CcUC01G005010 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus]) HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151 Identity = 266/294 (90.48%), Postives = 279/294 (94.90%), Query Frame = 0
BLAST of CcUC01G005010 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]) HSP 1 Score: 511.1 bits (1315), Expect = 6.2e-141 Identity = 250/297 (84.18%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of CcUC01G005010 vs. NCBI nr
Match: XP_022929169.1 (L10-interacting MYB domain-containing protein-like [Cucurbita moschata] >XP_022929170.1 L10-interacting MYB domain-containing protein-like [Cucurbita moschata]) HSP 1 Score: 498.8 bits (1283), Expect = 3.2e-137 Identity = 254/304 (83.55%), Postives = 273/304 (89.80%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28 Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153 Identity = 271/297 (91.25%), Postives = 281/297 (94.61%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy TrEMBL
Match: A0A1S3AT15 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153 Identity = 271/297 (91.25%), Postives = 281/297 (94.61%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151 Identity = 266/294 (90.48%), Postives = 279/294 (94.90%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy TrEMBL
Match: A0A6J1DZU8 (L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111026126 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 3.0e-141 Identity = 250/297 (84.18%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of CcUC01G005010 vs. ExPASy TrEMBL
Match: A0A6J1EN01 (L10-interacting MYB domain-containing protein-like OS=Cucurbita moschata OX=3662 GN=LOC111435828 PE=4 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137 Identity = 254/304 (83.55%), Postives = 273/304 (89.80%), Query Frame = 0
BLAST of CcUC01G005010 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29 Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 0
BLAST of CcUC01G005010 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29 Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 0
BLAST of CcUC01G005010 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 5.6e-23 Identity = 77/317 (24.29%), Postives = 141/317 (44.48%), Query Frame = 0
BLAST of CcUC01G005010 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 3.4e-12 Identity = 39/131 (29.77%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of CcUC01G005010 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09 Identity = 31/109 (28.44%), Postives = 56/109 (51.38%), Query Frame = 0
HSP 2 Score: 42.4 bits (98), Expect = 7.6e-04 Identity = 18/51 (35.29%), Postives = 32/51 (62.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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