CcUC01G001320 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G001320
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Tumor necrosis factor receptor family protein
Location	CicolChr01: 1123729 .. 1128386 (+)
RNA-Seq Expression	CcUC01G001320
Synteny	CcUC01G001320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCGCTTTATGCGTTTTACGATTACGATCATTCCAAACCAACCGAACTGGTTCGTTCAGATCGGTTATGAACCGATTTCCATCACAACACAATTGAAGTCACACCGAAAAACCCTTTGTGCTTCTCGCTCGTAGTCGACTCTCTCCGAATCTCAGAATCTTGGCGGCGGCGGCGGCAAACCGGTGCGACGGCGGGTAGGAGTAGTCAAAGACGAACAGTGGTAGAGCTCTGTGCCACGAAATAGCGCGGTAGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGCAAATGCAGGTGGAGGTGGAGGATCTGCTGGTCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGTACGTTTTCCCCTCACCTTCAGTTTTTGTTACGTATCATGGTTTATTATTATTATTTTTTTCATTTCATTTCCGAATGGTGTTACAAGAGTTGATTGGTCTAGGTTAGGTTAGCTCGGCAGCCACATTAGCTAAAGTCTGATATTTGGTCTCAGAACTTGATCAAGAGACCACATGTTTTTTTCTTCCACTGTCTTTCATCCAAGCGACCAGCCTAATTTGAGTGTGGATATGTTTTTGAGGAAAAAGCGACTGCCATCTAGGAATGTTCGTTCGCATAAAGTATTGAAGACTGGTTTCCCAGCCATTCGGCTGGAACATAGAAATTACTTTATTTAAAACTCCATTAAGATATGAATTACTGATATCTATCTGATTTGGCAATCATTTTTCAAAGCAACACTAATAATTAGTCAGGCATAGTTGGTTTTTGAGTAATTTTGATGAAACACTTTTGCAACCAAATAAGCATTATACCTTTGAACACTTGCCGCACACATATAATTTTATATTGAATCGCATTTGTTGCTGGTTCCTAGAGATGCTCAGGAGGAGCACTGACGAGTGAAGTGGGTTAGAATGAGTAGCCTGTTGTGCCAACCTTCTTAGGTATCTCCAGCATTCTCTGTCTCACATATGTCATTAGTACTGTCCCAACCCAATGTTAAACCCCAAAGCACCCGAAGGTGATTACATTGAAGATTTTCAATTGAAAATTAAATAATAAAGATTAAAGTGCTTAAAAGGATGCTTAGTTTTGCACCAATACAAAGTTGTAGACAAAACCAAATACATAAAATTATCAAAAGCTAAAAAAGAATCTCTATGAACGACACTTATTGCTCTTGCCTATAAAGTCCAAAAGAAAGCTCCCGTCTTCTTTGTACTATGAAAAGGATGCTCCACCAGAAAAGATGCAAAATTGCAAACATATTATCGGAATAAGACAACAACCAGTCAAAAGCTTCCAAAATAATATGCCAGAAACGAGAAGCATAAGAACAATGGAAAAAAAAGATGAGCAGAGGTTTCAGAATGGCATTGACACCAAGAAGGAGAGATAGACATATAGGGCATACGATGTTGTCATTGAAAGCTTTGTTTCCCTCTGTCCTTCCTGCCCATTCACCCTCTTTTATCACCCGTGGAAAATAGACCAAAGCCAACCAAAACATAAAAAATAAGCCATCTTACCGCTCTTCCCTCAATCAACCCAAAGCCCATTGACATTCTTTTGCCCTAAAGCACCCACCAAGGCCCCTTTTACTCTACCCCACAACACTATCAACATCTCCAAACAAACAAGCTATTACCATCAACCCTTACGATACCTTTCTTGTCCTTGGCACAAAATTCTCCACACCTTTTTCACACTTTGACTCAAAAAGATGCTTGTATCTCTAGCCCTCTCCCTTTCTCCACTGCACCACCCTTTCCCTCACTTGCAAAAACTTCACACCCGCCTTCAACAAAACAGATTGACTTATCCAACAGACTCTTCCACTCCTTATTAGCACATTGGGCCCTATCGATTTCCCGCTTAAAGATGGGCTTCTGACATGGCTTGACAACAAAGCTCCTCCTTTTATGACCCTTATCAACAAATTTTTTATTTTGAAGGAATTCCCTTGAGAAGTTCTCCAACATTGAGTCAAGCGTAATGATAGACCAACATTGGATCATTATCCCATTCTACCATTTTTATTGACATGTCTCTTATAAAATATACGATTGGTACCTTATCCATGGAGCTATGTTTAGAATTGCTATTTGACGGAAAACTGTCAGAAATAACACAAAAAAAATTTCATCTTTCATATTAAATGCCACTCTTTTTGGCTAATTGTTTTAATGGCTCGTCCTTGTTCCATTTCGGCCAGGATCTAGACCAAGACCAAAACAATTTTAACTTGCTTTTATCGCAAGTTTTGACCATCATTTTTGTGTTTTCTCGGTGGCAATCTTGGCTAGGATGAACACCGATAAAGAAAAGAAGTCCAAATTATTTGATATCAAATCTTAAACTTCCATGAACCTTCATCAGCTGGTGATTTCTTTTTTTTAATATTTTTTCGTTTTTTTTCCTTTTTCTTTTTTCACTCCAGTTCTTGTGTTTCCCATCTCTCTCTCTCTCTCTATATATATATATTCTTTTTGTGGAGTTCTTGTGTTTACTTTTTCATGTCAATCAATATCAAACTTCTCTACTATACAGAGAAGACTTTCAGATGTCTAGATCTCTATTTTTTGTTTTCATTTTCAAATTATGAAGTAAACGCTTTTACCAGAATTTTTTTTTAGTATTTAATAGTAAACTCTCAACTCACCGGTAGAGTTTCTTTTCAGCAACAGGGCATTGATTTCTTCCATTGGTGATAGAAAGTTGTTAGCAAATGATGTTTCTCATATACAGCGAAGACTTGGATCATAAGATGGGACGATTCTTGTTCTCTTACGAGTTTACCCAGTTGGACTGTAGACAGAAATTTTCTCTATGTATTAATTAGTCAGATGGAAAGTGATGCATTCTGATGAAGTGTGGAGTTTAATATTTGATATCATATAATTTAGGTTTCTTTTGCTTCTTTCTCAGTGTTCTTCCCGGCCAGGATTTCCACCGAGAAAACACAAAATTGATAATCAAAACTTGCTATAAACATAAGTTAATTTTGTTTTGGTCTTGGTCTCGAGGGCGGCCAAGATGACACTAGGACGAGCTTTTAAAACAATTGGCCAAAAATGATGTTATTTGTGAAAGTTGAAAGCTTTGTGCTATTTCTAACAATTTTCCCTAACATGAATCATTACAATAAAATCATTAAAAAAATTTGAATTTTGTTTAACTATTATGGAAAAAAGATTATGAAGTAAAAAACTTACAATTATTGGAAATTATCAAGTGACTTCTACTATTTTATAAATCATGAACGAAGTTGCTGACTTTCTGTATTAGCTCCAATTTAATGTGTCACTTTCGAAATTGGATCATTTGAATATATCTTATAGAAAGCCAATGACGACTAAATCCATCATGTCTGGGACTTGCCAAGTCCCTGTTAAAGGAATTTTTATTTATATAGCACTTCTCCGTTCATCAGTCATGAAAACCAAGGTTTTACTCGAATTTTGCCCTTTCTATCTAACACTACTTTTCATATCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTGAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCGAAGTCACCAGTAAAGAGAAGAAAGGCATCGAAATAGACCTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCTGGCAATCCTCTGGTTTGTTTGTACTGATGCGGGCTCATGACGTATGATGAATTTGTGAGTCCCTCCACCTTTTTTTCCCCCCATTTCAACTCATTTTGGTCATATGCAAGGTTTTTCGAACATTTGACATTGACTTGTTTCCATATATAGACTGATAAAGCATGTATTTATATTCATGCTCGATAAAGCATGGATCACAATGCCTCGTTCTCTTTGGATGGATAGCTAGACTGAGACCACTATGGGTTGACCTAATAAGGACCAAGTAAATAAAAGGCTTAGAGAGGTTTAAGTCATGGTGACCACCAATTTAGGCTTTGAGATTCTATAGATTGACTCTCTAGTTTCAATTTAAGTGCATTCGGCTACTTTGAAATGTTTAACAGTTATTTCAAGAGTATGCAACTTGTGTAAATTGGATCGGATTTTATGACTACAAGCTAAAAGTCGACCCTTCTAGATGAAGTTTTGGTTTTCTGGGTATAAGTTTACTTTGATGCAGAAGCTTAAAAAGCTCAAGAGGACCGTGATTGAGGATTGAAAGTTGGTGCTTTCTAATTAATTATTTATTTTTGGACAGTTAAAAAGGTGAAATTTATGGTTCAATGTTCTCATCATATCAGTTAAATATGCCTAGAATACAAGCTTATGGCAAGATTATGATAGAAGGCCAAAATAATGAAATTGTGTGTTTAGAAATGCTTTACAAAATCATATATAAACCAAATGCAG

mRNA sequence

AAGCCGCTTTATGCGTTTTACGATTACGATCATTCCAAACCAACCGAACTGGTTCGTTCAGATCGGTTATGAACCGATTTCCATCACAACACAATTGAAGTCACACCGAAAAACCCTTTGTGCTTCTCGCTCGTAGTCGACTCTCTCCGAATCTCAGAATCTTGGCGGCGGCGGCGGCAAACCGGTGCGACGGCGGGTAGGAGTAGTCAAAGACGAACAGTGGTAGAGCTCTGTGCCACGAAATAGCGCGGTAGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGCAAATGCAGGTGGAGGTGGAGGATCTGCTGGTCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTGAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCGAAGTCACCAGTAAAGAGAAGAAAGGCATCGAAATAGACCTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCTGGCAATCCTCTGGTTTGTTTGTACTGATGCGGGCTCATGACGTATGATGAATTTACTGATAAAGCATGTATTTATATTCATGCTCGATAAAGCATGGATCACAATGCCTCGTTCTCTTTGGATGGATAGCTAGACTGAGACCACTATGGGTTGACCTAATAAGGACCAAGTAAATAAAAGGCTTAGAGAGGTTTAAGTCATGGTGACCACCAATTTAGGCTTTGAGATTCTATAGATTGACTCTCTAGTTTCAATTTAAGTGCATTCGGCTACTTTGAAATGTTTAACAGTTATTTCAAGAGTATGCAACTTGTGTAAATTGGATCGGATTTTATGACTACAAGCTAAAAGTCGACCCTTCTAGATGAAGTTTTGGTTTTCTGGGTATAAGTTTACTTTGATGCAGAAGCTTAAAAAGCTCAAGAGGACCGTGATTGAGGATTGAAAGTTGGTGCTTTCTAATTAATTATTTATTTTTGGACAGTTAAAAAGGTGAAATTTATGGTTCAATGTTCTCATCATATCAGTTAAATATGCCTAGAATACAAGCTTATGGCAAGATTATGATAGAAGGCCAAAATAATGAAATTGTGTGTTTAGAAATGCTTTACAAAATCATATATAAACCAAATGCAG

Coding sequence (CDS)

ATGTGGTTTCGCAGTATCCAAAGAATTGCAAATGCAGGTGGAGGTGGAGGATCTGCTGGTCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTGAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCGAAGTCACCAGTAAAGAGAAGAAAGGCATCGAAATAG

Protein sequence

MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTPGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK

Homology

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BLAST of CcUC01G001320 vs. NCBI nr
Match: XP_038876162.1 (uncharacterized protein LOC120068455 [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 9.3e-72
Identity = 144/154 (93.51%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW RSIQRI NA GGGGSAGLVF TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           VKQHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC QVGSNKKFLLCT
Sbjct: 61  VKQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCNQVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AEQLKSSSES VQRKKRAKSPVKRRKASK
Sbjct: 121 PDDPRAEQLKSSSESGVQRKKRAKSPVKRRKASK 154

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BLAST of CcUC01G001320 vs. NCBI nr
Match: XP_004145885.1 (uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical protein Csa_000114 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRI NA GGGG AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

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BLAST of CcUC01G001320 vs. NCBI nr
Match: XP_008437479.1 (PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRI N  GGGG  GLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           ++QHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+MLNLFC  VGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+ SES  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

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BLAST of CcUC01G001320 vs. NCBI nr
Match: KAG7035535.1 (hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 2   WFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGGGSAGLVF TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+ E+LKS+SE VVQR+K+ K+ ++RRKASK
Sbjct: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of CcUC01G001320 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 2   WFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGGGSAGLVF TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+AE+LKS+SE VVQR+K+ K+ ++R+KASK
Sbjct: 123 NDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

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BLAST of CcUC01G001320 vs. ExPASy TrEMBL
Match: A0A0A0KK52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRI NA GGGG AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of CcUC01G001320 vs. ExPASy TrEMBL
Match: A0A1S3ATS9 (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.3e-66
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRI N  GGGG  GLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           ++QHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+MLNLFC  VGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+ SES  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of CcUC01G001320 vs. ExPASy TrEMBL
Match: A0A6J1K817 (uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64
Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 2   WFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGGGSAGLVF TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+AE+LKS+SE VVQR+K+ K+ ++R+KASK
Sbjct: 123 NDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of CcUC01G001320 vs. ExPASy TrEMBL
Match: A0A6J1H3U5 (uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC111459852 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.7e-64
Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 2   WFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGGGSAGLVF TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+AE+LKS+SE VVQR+K+ K+ ++RRKASK
Sbjct: 123 DDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of CcUC01G001320 vs. ExPASy TrEMBL
Match: A0A6J1E538 (uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026127 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGGSAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW R  QRI +A GGGGSAGLVF TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           VKQHGPL++SNAWIKAQE GVSGLNSKTHMKL+LKWMRGRKML L C QVGSNKKFLL T
Sbjct: 61  VKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            P DPQA+QLKSSSE  VQR+KR K P +RRK SK
Sbjct: 121 LPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

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BLAST of CcUC01G001320 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 82/159 (51.57%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MWFRSIQRIANAGGGGG-----SAGLVF-------GTFARFFSRKRAENLRKINPKLTPQ 60
           MWF        AGGGGG      A  +F           R+ SR+RA N+RKINPK+  Q
Sbjct: 1   MWF--------AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQ 60

Query: 61  EASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCI 120
           EA  ++  LY + K HGPL+V N W++AQE+GVSGLNSKTHMKLLLKWMRG+KML L C 
Sbjct: 61  EAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICN 120

Query: 121 QVGSNKKFL-LCTPGDPQAEQLKSSSESVVQ--RKKRAK 145
           QVGS+KKF     P DP  EQ  +  E+  Q  +KKR+K
Sbjct: 121 QVGSSKKFFHTVLPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of CcUC01G001320 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 22  VFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 81
           V G   R F+ K    ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C  VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of CcUC01G001320 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 22  VFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 81
           V G   R F+ K    ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C  VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

The following BLAST results are available for this feature:

BLAST of CcUC01G001320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876162.1	9.3e-72	93.51	uncharacterized protein LOC120068455 [Benincasa hispida]	[more]
XP_004145885.1	2.4e-67	87.66	uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical ...	[more]
XP_008437479.1	1.3e-65	85.71	PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]	[more]
KAG7035535.1	1.2e-63	83.66	hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022996189.1	1.2e-63	83.66	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]

BLAST of CcUC01G001320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC01G001320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK52	1.1e-67	87.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
A0A1S3ATS9	6.3e-66	85.71	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]
A0A6J1K817	5.9e-64	83.66	uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495...	[more]
A0A6J1H3U5	7.7e-64	83.66	uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A6J1E538	4.2e-62	82.58	uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of CcUC01G001320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73940.1	1.2e-32	51.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.1	1.8e-17	37.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.2	1.8e-17	37.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..154
None	No IPR available	PANTHER	PTHR35110	EXPRESSED PROTEIN	coord: 1..149
None	No IPR available	PANTHER	PTHR35110:SF1	EXPRESSED PROTEIN	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G001320.1	CcUC01G001320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane