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Carg28281 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACTATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGGTAAATTTCATGTCTGCCCATTCTTGTAATTTCAACCAAACCCCTTAAATCTCTATGTATTAATATTTGATTTCATGAATTAAAGTTTGGGATGGACTAACATTTCAATTTAATATTTACGTAGGACTTAAATAGAAAATAATGAAAAAAATAGAAATAAATTTAATTGTTTTAAAACGAGACCTTTAGATCTAAATTATCCAAAACCGAAGAGGAATCAATAGTAAAGTTTTGGAACGCGTTACCTTAATAATTATGATCAAAAGTAAAAGAAAGCAGGTTCTTAAACTCATGATTCGAATTACTCCACAAGATAGTTTGATCAAGGTGATCTAAATGATTCTAGCATGTAAACTTATGGCTTAAAAACGGTAATATATAACTTTCATTTTAATCTTTTTACGAATGCACCAACATAAATTGTTATTTATAATCTTGAAAATAAACCTTAAACTAACCTATGGTTGGTTGTAACTCTCATGTTCATCGATACAATAACGACAACTAACTAGATTTATGTAGAAATCACATTCAATTGGAAACATTAGGATAAAAATTGATTAATACCATTAAGTTTAATGGTTAAAACTAAATATCTCGAATCAAATATATATTGATATGAGTAGAACTGCCAATGAATACTATGTTATTTCAATCATGCTTGTTCAAGATGTGTTACGTTGTCCATGACTGCATGCACATTCCAAATTCTTTTTACTTGCTTTCATATTAGATAGACATTTACCATTATTGTTGTATCAATATGAGGGCTTATGATCGATCACTAAAATCATGCCTATACCAGTCAGGGCTAAAATGCTGCAAAATGTAATATAGGAGATGTGACGAGTTGTCAATTTCTCCTACCTGAGTTATATGCTATCAAACCCATTATTGTTGTCTACTCACTTTTAGCCTATAACATTACTTTTTTTTAAATTGTTTTCAACGTATTTCCTTCCTCACATTTCTAAAACATTTCACTGAAATGTGACTTGAGACTCGATTAAACGTCGGTCTCATCTGCAAAATCTGAATTTCACACGGTTGACTTGTTCGCTGGATTAGAATAAATGACGCACAATCGCTGTTCCGTTGCCGCAAGAGAATAATTGTGACACGAGGCTCCTTATGATCACCCAAGAAGGCTGACACAGTACTTGTATCTGTGAAACTTCTGACAAAAACAATAAAAGACAAAATTTTGTTGGAACCTAAAAGTACTGGTTCAAATTTAAGGGTTAGTTTCGACCCTCATTTAATCTTAAATAAATATTACATAACTTGAGGGGAGTTTTTATATATATGTACATATATAGATAGATATGTATATATATATAAAAGTGCTATACATATACATATATATTCTATATAGGGTTGGTAGACACCAAGCCTAGACACAAACAAAAAATGGACTAAAAAATATTTATAAGACAAAAAAAAGTCAGAGGCTAAGTGGTTGATCTATGTTCTCGATTGAAAGTCTTCTCTCATCTCTGACCAGCTCCTAGTTACCTGAAAAATATTGACAACATGAAGTGAGTGCAAAGACTTAGTAAGTAGCCTATTATAAGCTATTGATCGTGTCCTTGAACTAGAATACCCTCTTTGAGTATTCAAGGACCTAACATATTACTTAGCTTGGTTCATGGTCAACTTGGAAGCTACCCCTAAAGTGACTCTAGATTACTCTCCATGAAAGATCAATGACGTCGGTCACATGGTTGGTGCAAAACATGGTCATAACATCTTCCTAATAAGACCTAATGCAAGACATCTTATCTAGGCAAGGAAAACATGAGACCCATCATGACATCGTACTCATAAGGCATGGTGTTCAGCATCCCACCTAGAAGAGAAATTATGAGTCTCGTAAAATACCGTATGATGGGAGGTCATGGTCACTTAGGGTATAGGAGCATAGTACCTAACAAGCTTAAACATCATGATTTTAGGGCATGGGTGTGTAGAGTATGAGTTTGCATGGTCCTAGGGTGTGTTCTTGGTGCATGAGTCTTCTAGTGTACCCTATTCATGGTAACCCTAAAGTAACATAGTATTTGGAGTATCGTAAGGAGGTCTTAAAGATAGTATGACCAAGGGAATATTTAAATTCTTAAATAATCCTCCATCTTAGTTAATAGGGACACTATGGTAATTTTCTACCTAAATCCTGGTTTGAGTCTCAAATGTCGTCTATGGTCAATACAAATTTATTATTCCTTTGAAATTTATAATTTGGGGTCACGTATAAAGTTTCAAGTCATTCGGAGGTCATTAGGGTCGTGAACCGTAGGTAGGATGCTTTAGGGGCCTTATAGTCATTTTACATCATTACTTGGTTTAGCTACTTAACCTTATCCAATGACCACCAAATTTCATATATATCCTTAATATATCCTAATATACTTAGCATTAAAATTTCATGAGTAGCGGAGTTCAGGATTCTTAATCTATTTCTTTCCTGTTCATCTAGTCCTTAATTAATTTAAGGTTTATTTCAAATTTCCAACCATTTCTAAGTATTTCTTAAGAAAACATTGGGTTGGCTACTTACTTTTAGTCGATGTTTGGGGCTCGGTTCTCAAGTTCTTGGTATCCAAATTACTTCAAGTTTTCTTTGACAGACTCCTTGGAGTGTTTAACTTCTAGAACCATTGAGAACTTTATGAGAACCGATCGGTATGGGGTTCAATTTTGGGTAGATTAAACGAGCCGTGTCATTGTCATCTTCCTCCCTAAGGGGAATAAGACACGCATGCCATTAGCGCCAATGTTTGAAAACCATGGTCCACAACTTGTTCTAAAATATTATTTTCCCTTTATTCCTTCATAAAAATTAAAGATAGAACATTGACCAAGAGTTAGAGACTGATATCTTACATTTTTGGTGTTGAGTTATAGCCATGTAAAGTTGACAAATAAAAAAAACTAAAATTCTCGCGAGAGTAAATCCATAACCATTTATTATTGGTTGGAGCGATTGAGACACTTTTACGCCACGATTTCTTCACATAATTTCTGTAACGTCCTAAATTTCTACTTATTTAGAGTCGCTACCGTTGTCATCATCTATACTCATGTGCAGAATTAAATATTTAAAACTTCCTCATAAACTTAAACTTCATCTTAAAACATTGTCACGGACTTATGTGTTCGAAAACATCTTTTAAATGACACAACAAAATACTAAATAAAATAAATAAACATTAAAATTAAAAACACCATATTCAAACCTAAGTCTAAGAAAGTATGTACAACTATCCTATGCATGTGTCATAGTTTAGAACTGCGATGTCGTCATCAACCTTACAGAGATGTCTTGCCTTTACCTGAAATAGAAGTAACACGTGACTTAAGTATTTTAAAAAATACTCAGAAAGTGAATGCAAACGCATGTAACTCATGATCTAGAGACCTATCATTTAAAAACTATCATACGGGTGGCCTTCCGGGAAGGTTCGGAGGTGCTGCCATGGCTATGGAATTCCATCGGGCCATATCCACTTAAGAGTATGTTTGAAAGTTTCAAGTTTTGTTTGTAGGGCCTTGTGGACAATTCATCTCCACAGAGAAGAGGGCCT ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACTATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGGGCCTTGTGGACAATTCATCTCCACAGAGAAGAGGGCCT ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACTATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGGGCCTTGTGGACAATTCATCTCCACAGAGAAGAGGGCCT MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNYYNSHFAPESAGRHISFGFSFRRAAHTKPILGLVDNSSPQRRGP Homology
BLAST of Carg28281 vs. NCBI nr
Match: KAG7029982.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 282.0 bits (720), Expect = 2.8e-72 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Carg28281 vs. NCBI nr
Match: KAG6599021.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63 Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Carg28281 vs. NCBI nr
Match: XP_023520460.1 (zinc finger protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60 Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Carg28281 vs. NCBI nr
Match: XP_038889251.1 (zinc finger protein 5-like [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 4.9e-29 Identity = 73/107 (68.22%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of Carg28281 vs. NCBI nr
Match: XP_004143824.1 (zinc finger protein 5 [Cucumis sativus] >KGN51556.2 hypothetical protein Csa_008977 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 3.2e-28 Identity = 74/122 (60.66%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.5e-15 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-09 Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08 Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.5e-08 Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy TrEMBL
Match: A0A5A7TC61 (Zinc finger protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00110 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27 Identity = 73/127 (57.48%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy TrEMBL
Match: A0A6J1DUD1 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111024100 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 2.0e-23 Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy TrEMBL
Match: A0A0A0KNG0 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G477610 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy TrEMBL
Match: A0A251U1C5 (Putative zinc finger C2H2-type/integrase DNA-binding domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0209051 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.0e-17 Identity = 62/132 (46.97%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Carg28281 vs. ExPASy TrEMBL
Match: A0A7J7D454 (Putative C2H2 and C2HC zinc fingers superfamily protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW10G00034 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of Carg28281 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 ) HSP 1 Score: 82.0 bits (201), Expect = 3.9e-16 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Carg28281 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.9e-10 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of Carg28281 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10 Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
BLAST of Carg28281 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 61.2 bits (147), Expect = 7.2e-10 Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Carg28281 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 6.1e-09 Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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