Carg28267 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28267
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCarg_Chr17: 4705086 .. 4706722 (+)
RNA-Seq ExpressionCarg28267
SyntenyCarg28267
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGATTAGGCTTGACAACTTTGATCCTTTCATGGAAGCAATCATCCAAATGCATCAAATTTCTAAGTACGCCGACCTGAAAGTCTCGCCATTGTCATTCTCCACGAGTGTGTCGCACCCTACCCATGGCTTCGCTGTTAAACTGCACATTTCCCCCAAATTCTTCGCTAACTATTCCGTCGATAAGCATCACCGTTGGAGGATTTCCCTCGTATCCTTCCAAGATGCCATGTTCATTGCTCGAAAGCGATGTTTGGCTTCAATGAACCTCATTTTTCTCCAAAATATGAACCAATTGACCCTTATATTCTCCACTTCAAGTTAGTTTATACTCTTTTATTTACACCAATTCTTGTCCATTCTCGAAGAATATTTCATTCTTTTCTCATCTTGTTCTTGCATTTTGTTGTAAATTTTGCAATAACTCATTAGTTCATAACTCTCAATGATTCATATTCTCATATAGGTTGGTTATTAACTTTCATTTCATTCATAACCCATTTGATTCATATTCTGATTTATTTGGTTCGTATATGAGAATTAGTATTGCTATGCCTATAATAAAGACTTGTCTAACATTATTTTGAGACGTGGAGTCATTGCTATTTTGTATTTTTCTGGCAATTAGGAGGAATTTTGTAAGAAAGATTTTGTAGTGTGAGGGTATGAGAGATACACTTATAAACACTTTGATTACTACAGTGATTGGCTACCACCGGTAGATGTAGAGGAATTTCTTTTCTCCGAACCATGTAATCTTTGTGTCTCTTTGTTTAATTTCTGTTTTTGGGTGTGTGAATACATATAATCCATTTTTAGTTGTATATTAGGACACAACATGTGGTATAACCTTTCATTCTTTTCTTATCTTGTTCTTGCATTTCTTGATAAAAACACTTCCAGGAAATGCGGACGCATTGCAATTTGGATTGGAATTGTCACCTTCCCAACAAGAGGTGGATGGAGGAGCAGTTGATTTTGCAAATTTCTTCTCAATTTATTCAAAAGATTTAAGACGATATATACTAATAAACTACTTCCCTCGTGATCCAGGTAATTAGGATCTTCGTTTTTGTTCATGTTCATTGGAAGAAAGTGGCTAATTAGTCTAAGATAGCGTTTTTTGTTTTTGTTCCATTTCAGGACGTAAGATAAATGCTATAAAAAGTCTACAATAACATTTTTCGTATTCGTATACTATCGTTTGTATTATTTCTTGTTTCATAAATTGCTTAAAACAAATTATCAATCTTTCACAGCTTGTGTTACTAATGTTACTGTGACGAATTCTCAAGTCAAAATCTCTATGGAAAACGAGGAACTTGTTATTTTGAGCAAGAAGGTATTGTTCGTGAGCTAATATCACGACATTCTAAGTGTTTTTTCCGAGAAGTTCTTACGTTAAATTTGTTGGTTGGTGTTTCGTAGGATGGAGAATGTGATATTGTAGGTTATGAAGAAGTTGAAACTCAATTCCAAATCAAGCTCCATATCTTGCCCATTTTCCTTAAGATGGCATCTGAGGACGAGAAGATATGGTTTTATAGGACTATGAATTCTCATTGTGGAATGTTTATCCCTACTTTTGAATCTCTTGCTCATTATGATGTCATATATTTTCCTCGAAGCTAA

mRNA sequence

ATGTTCTTGATTAGGCTTGACAACTTTGATCCTTTCATGGAAGCAATCATCCAAATGCATCAAATTTCTAAGTACGCCGACCTGAAAGTCTCGCCATTGTCATTCTCCACGAGTGTGTCGCACCCTACCCATGGCTTCGCTGTTAAACTGCACATTTCCCCCAAATTCTTCGCTAACTATTCCGTCGATAAGCATCACCGTTGGAGGATTTCCCTCGTATCCTTCCAAGATGCCATGTTCATTGCTCGAAAGCGATGTTTGGCTTCAATGAACCTCATTTTTCTCCAAAATATGAACCAATTGACCCTTATATTCTCCACTTCAAGAAATGCGGACGCATTGCAATTTGGATTGGAATTGTCACCTTCCCAACAAGAGGTGGATGGAGGAGCAGTTGATTTTGCAAATTTCTTCTCAATTTATTCAAAAGATTTAAGACGATATATACTAATAAACTACTTCCCTCGTGATCCAGCTTGTGTTACTAATGTTACTGTGACGAATTCTCAAGTCAAAATCTCTATGGAAAACGAGGAACTTGTTATTTTGAGCAAGAAGGATGGAGAATGTGATATTGTAGGTTATGAAGAAGTTGAAACTCAATTCCAAATCAAGCTCCATATCTTGCCCATTTTCCTTAAGATGGCATCTGAGGACGAGAAGATATGGTTTTATAGGACTATGAATTCTCATTGTGGAATGTTTATCCCTACTTTTGAATCTCTTGCTCATTATGATGTCATATATTTTCCTCGAAGCTAA

Coding sequence (CDS)

ATGTTCTTGATTAGGCTTGACAACTTTGATCCTTTCATGGAAGCAATCATCCAAATGCATCAAATTTCTAAGTACGCCGACCTGAAAGTCTCGCCATTGTCATTCTCCACGAGTGTGTCGCACCCTACCCATGGCTTCGCTGTTAAACTGCACATTTCCCCCAAATTCTTCGCTAACTATTCCGTCGATAAGCATCACCGTTGGAGGATTTCCCTCGTATCCTTCCAAGATGCCATGTTCATTGCTCGAAAGCGATGTTTGGCTTCAATGAACCTCATTTTTCTCCAAAATATGAACCAATTGACCCTTATATTCTCCACTTCAAGAAATGCGGACGCATTGCAATTTGGATTGGAATTGTCACCTTCCCAACAAGAGGTGGATGGAGGAGCAGTTGATTTTGCAAATTTCTTCTCAATTTATTCAAAAGATTTAAGACGATATATACTAATAAACTACTTCCCTCGTGATCCAGCTTGTGTTACTAATGTTACTGTGACGAATTCTCAAGTCAAAATCTCTATGGAAAACGAGGAACTTGTTATTTTGAGCAAGAAGGATGGAGAATGTGATATTGTAGGTTATGAAGAAGTTGAAACTCAATTCCAAATCAAGCTCCATATCTTGCCCATTTTCCTTAAGATGGCATCTGAGGACGAGAAGATATGGTTTTATAGGACTATGAATTCTCATTGTGGAATGTTTATCCCTACTTTTGAATCTCTTGCTCATTATGATGTCATATATTTTCCTCGAAGCTAA

Protein sequence

MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANYSVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLELSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEELVILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPTFESLAHYDVIYFPRS
Homology
BLAST of Carg28267 vs. NCBI nr
Match: KAG7013856.1 (hypothetical protein SDJN02_24025, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510.4 bits (1313), Expect = 9.0e-141
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY
Sbjct: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLEL 120
           SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLEL
Sbjct: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLEL 120

Query: 121 SPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEEL 180
           SPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEEL
Sbjct: 121 SPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEEL 180

Query: 181 VILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPTFE 240
           VILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPTFE
Sbjct: 181 VILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPTFE 240

Query: 241 SLAHYDVIYFPRS 254
           SLAHYDVIYFPRS
Sbjct: 241 SLAHYDVIYFPRS 253

BLAST of Carg28267 vs. NCBI nr
Match: KAG6575318.1 (hypothetical protein SDJN03_25957, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 175 MENEELVILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGM 234
           MENEELVILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGM
Sbjct: 1   MENEELVILSKKDGECDIVGYEEVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGM 60

Query: 235 FIPTFESLAHYDVIYFPRS 254
           FIPTFESLAHYDVIYFPRS
Sbjct: 61  FIPTFESLAHYDVIYFPRS 79

BLAST of Carg28267 vs. NCBI nr
Match: XP_031744160.1 (uncharacterized protein LOC116404808 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-37
Identity = 107/253 (42.29%), Postives = 149/253 (58.89%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL NF+PF  A  ++  I++ AD+K +PL FS +VS+    F   L ++   F NY
Sbjct: 1   MFLVRLKNFEPFFHATSRLALIAREADVKFTPLFFSITVSNQFPRFVAYLVMTYNCFINY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLEL 120
            VD  H  RISL SF DA+         SM +  L N+NQ+ L F +S +A  ++  L L
Sbjct: 61  KVDNDHTSRISLESFHDALLDGGGS--PSMTIHLLANINQMILRFESSSHAPQVRHELSL 120

Query: 121 SPSQQEVDGGAVDFANFFSIYSKDLRRYIL-INYFPRDPACVTNVTVTNSQVKISMENEE 180
            PSQ+E D G +D+A FFSI SK LRR I  +  F  D  C   VT T SQVK S+ ++E
Sbjct: 121 KPSQEE-DLGEIDYAKFFSIDSKALRRVIRNLPIFHGDSIC---VTATRSQVKFSIASKE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPT 240
            ++L+K++ EC IVGYE E ET+  I L+ +  FL    +  ++WFY+T   H  M +P+
Sbjct: 181 -IVLTKENEECIIVGYEGEEETKMGINLNPMLFFLNFTHDTLRVWFYKTTTYHGAMVVPS 240

Query: 241 FESLAHYDVIYFP 252
           F   + Y VI FP
Sbjct: 241 FGFYSQY-VILFP 245

BLAST of Carg28267 vs. NCBI nr
Match: XP_022958857.1 (uncharacterized protein LOC111460011 [Cucurbita moschata])

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-35
Identity = 106/252 (42.06%), Postives = 148/252 (58.73%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL +FDP MEA   + QIS  ADLK S   FS   S+P+H F     IS +FFANY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSHRFVATFQISHRFFANY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNAD-ALQFGLE 120
            VD++H  R+SL SF +AM+       +SM + F +  +++ L F +S +    +   L+
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAG--IVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLK 120

Query: 121 LSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEE 180
           LSPSQ+E + G +    FFSI S+D R   +I   P  P     V++T+S+VK    +EE
Sbjct: 121 LSPSQEE-ELGQIQHDRFFSIISQDFRD--IITGLPSFPNNSIFVSLTSSRVKFCWASEE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPT 240
             IL+K+ G C IVGYE + E  FQI L+    F  ++    +IWFY+T++S C +FIP 
Sbjct: 181 R-ILTKEGGRCVIVGYEGQAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFIPA 240

Query: 241 FESLAHYDVIYF 251
           F   A Y VIYF
Sbjct: 241 FGLNAQY-VIYF 245

BLAST of Carg28267 vs. NCBI nr
Match: XP_023006010.1 (uncharacterized protein LOC111498887 [Cucurbita maxima])

HSP 1 Score: 158.7 bits (400), Expect = 6.7e-35
Identity = 105/252 (41.67%), Postives = 147/252 (58.33%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL +FDP  EA   + QIS  ADLK S   FS   S+P+  F     IS +FFANY
Sbjct: 1   MFLVRLHHFDPLREATSLLAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNAD-ALQFGLE 120
           SVD++H  R+SL SF DAM+       +SM + F +  +++ L F +S +    +   L+
Sbjct: 61  SVDRNHSSRVSLQSFYDAMYDG--IFFSSMTIHFPETTSRMVLQFESSNHTKLKMHRVLK 120

Query: 121 LSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEE 180
           LSPSQ+E + G +    FFSI S+D R   +I   P  P     V++T+S+VK    +EE
Sbjct: 121 LSPSQEE-ELGQIQHDRFFSIISQDFRD--IITGLPSFPNNSIFVSLTSSRVKFCCASEE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPT 240
             IL+K+ G C I+GYE E E  FQI L+    F  ++    +IWFY+T++S C +F+P 
Sbjct: 181 R-ILTKEGGRCAIIGYEGEAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFVPA 240

Query: 241 FESLAHYDVIYF 251
           F   A Y VIYF
Sbjct: 241 FGLNAQY-VIYF 245

BLAST of Carg28267 vs. ExPASy TrEMBL
Match: A0A6J1H2Z8 (uncharacterized protein LOC111460011 OS=Cucurbita moschata OX=3662 GN=LOC111460011 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-35
Identity = 106/252 (42.06%), Postives = 148/252 (58.73%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL +FDP MEA   + QIS  ADLK S   FS   S+P+H F     IS +FFANY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSHRFVATFQISHRFFANY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNAD-ALQFGLE 120
            VD++H  R+SL SF +AM+       +SM + F +  +++ L F +S +    +   L+
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAG--IVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLK 120

Query: 121 LSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEE 180
           LSPSQ+E + G +    FFSI S+D R   +I   P  P     V++T+S+VK    +EE
Sbjct: 121 LSPSQEE-ELGQIQHDRFFSIISQDFRD--IITGLPSFPNNSIFVSLTSSRVKFCWASEE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPT 240
             IL+K+ G C IVGYE + E  FQI L+    F  ++    +IWFY+T++S C +FIP 
Sbjct: 181 R-ILTKEGGRCVIVGYEGQAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFIPA 240

Query: 241 FESLAHYDVIYF 251
           F   A Y VIYF
Sbjct: 241 FGLNAQY-VIYF 245

BLAST of Carg28267 vs. ExPASy TrEMBL
Match: A0A6J1KZ05 (uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35
Identity = 105/252 (41.67%), Postives = 147/252 (58.33%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL +FDP  EA   + QIS  ADLK S   FS   S+P+  F     IS +FFANY
Sbjct: 1   MFLVRLHHFDPLREATSLLAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNAD-ALQFGLE 120
           SVD++H  R+SL SF DAM+       +SM + F +  +++ L F +S +    +   L+
Sbjct: 61  SVDRNHSSRVSLQSFYDAMYDG--IFFSSMTIHFPETTSRMVLQFESSNHTKLKMHRVLK 120

Query: 121 LSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEE 180
           LSPSQ+E + G +    FFSI S+D R   +I   P  P     V++T+S+VK    +EE
Sbjct: 121 LSPSQEE-ELGQIQHDRFFSIISQDFRD--IITGLPSFPNNSIFVSLTSSRVKFCCASEE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTMNSHCGMFIPT 240
             IL+K+ G C I+GYE E E  FQI L+    F  ++    +IWFY+T++S C +F+P 
Sbjct: 181 R-ILTKEGGRCAIIGYEGEAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFVPA 240

Query: 241 FESLAHYDVIYF 251
           F   A Y VIYF
Sbjct: 241 FGLNAQY-VIYF 245

BLAST of Carg28267 vs. ExPASy TrEMBL
Match: A0A1S3CL88 (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-29
Identity = 100/259 (38.61%), Postives = 140/259 (54.05%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQIS-KYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFAN 60
           MFL++L NFDP ++A   + QIS   ADLK +P  F    SH +  F   L +SP++F  
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFST-SRNADALQFGL 120
           +SVD  H  ++SL SF DA  I      ASM +  L   NQ+ L F T S     L   L
Sbjct: 61  FSVDNDHSSKVSLESFHDA--ILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHEL 120

Query: 121 ELSPSQQE---VDGGAVDFANFFSIYSKDLRRYIL-INYFPRDPACVTNVTVTNSQVKIS 180
            LSP Q E   +    +D   +F + SK LRR I  +  F  D   + +V VTNS+VK S
Sbjct: 121 TLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQND--SIISVDVTNSRVKFS 180

Query: 181 MENEELVILSKKDGECDIVGY-EEVETQFQIKLHILPIFLKMASEDEKIWFYRTM-NSHC 240
           + ++E+++   +   C I G+ EEVETQFQI L  +  FL    +  ++WFY+T  N++ 
Sbjct: 181 IASKEIILTEGR--HCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYT 240

Query: 241 GMFIPTFESLAHYDVIYFP 252
            M +P +     Y VIYFP
Sbjct: 241 LMVVPAYGIFGQY-VIYFP 252

BLAST of Carg28267 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27
Identity = 87/223 (39.01%), Postives = 128/223 (57.40%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL+ F+P ++A   + Q++K AD+K +PL     VS+ +  F   L +S + F N+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFST-SRNADALQFGLE 120
           SVD +   ++SL  F DAM        +SM +  L   NQ+ L F T S +   L   L 
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGS--FSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELA 120

Query: 121 LSPSQQEVDGGAVDFANFFSIYSKDLRRYILINYFPRDPACVTNVTVTNSQVKISMENEE 180
           LSP Q E + G V++ NFF++ S++LRR  +I   P       +VTVT SQVK S++++E
Sbjct: 121 LSPPQAE-NLGQVEYGNFFTVTSRELRR--IIKELPLFHQDTVSVTVTGSQVKFSIQSKE 180

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEK 222
            +IL+K+ G C IVGYE EVET+ Q+ L  +  FL       K
Sbjct: 181 -IILTKEGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

BLAST of Carg28267 vs. ExPASy TrEMBL
Match: A0A6J1KIW5 (uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 88/255 (34.51%), Postives = 144/255 (56.47%), Query Frame = 0

Query: 1   MFLIRLDNFDPFMEAIIQMHQISKYADLKVSPLSFSTSVSHPTHGFAVKLHISPKFFANY 60
           MFL+RL NF P ++   ++ QI++ +D+  +PLS   + S P+  F   L I  + F  Y
Sbjct: 4   MFLVRLKNFRPLVDGTSRLAQIARESDIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVY 63

Query: 61  SVDKHHRWRISLVSFQDAMFIARKRCLASMNLIFLQNMNQLTLIFSTSRNADALQFGLEL 120
           SV+  H  RISL S  DA+        ++M +  L+N N + L F T  +   L+    L
Sbjct: 64  SVNIDHCSRISLESLHDALLDCGSS--SAMTIHLLENTNLMVLRFETPNHEPQLRHDFVL 123

Query: 121 SPSQQEVDGGAVDFANFFSIYSKDLRRYIL-INYFPRDPACVTNVTVTNSQVKISMENEE 180
            P Q++     ++++   ++ S+DLR+ I  +  F  D  C   VTVT+S+V+ S+ + E
Sbjct: 124 LPPQEQ-SIEEIEYSKSLALDSRDLRQVIKELPLFHGDSVC---VTVTSSRVRFSIASRE 183

Query: 181 LVILSKKDGECDIVGYE-EVETQFQIKLHILPIFLKMASEDEKIWFYRTM-NSHCGMFIP 240
           L I  K+ G C+I+G++ +  T+F+I L+ +  FL +  + + +WF++T+ N+H  M  P
Sbjct: 184 L-IFKKEKGRCEILGHDGDAVTEFRIVLYPMLFFLNLTYDVQTVWFHKTITNTHDVMIFP 243

Query: 241 TFESLAHYDVIYFPR 253
            FE  A Y VIYFPR
Sbjct: 244 VFEIFAQY-VIYFPR 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7013856.19.0e-141100.00hypothetical protein SDJN02_24025, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575318.11.1e-37100.00hypothetical protein SDJN03_25957, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031744160.19.3e-3742.29uncharacterized protein LOC116404808 [Cucumis sativus][more]
XP_022958857.13.9e-3542.06uncharacterized protein LOC111460011 [Cucurbita moschata][more]
XP_023006010.16.7e-3541.67uncharacterized protein LOC111498887 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H2Z81.9e-3542.06uncharacterized protein LOC111460011 OS=Cucurbita moschata OX=3662 GN=LOC1114600... [more]
A0A6J1KZ053.2e-3541.67uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887... [more]
A0A1S3CL884.5e-2938.61uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=... [more]
A0A1S3C8J11.1e-2739.01uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
A0A6J1KIW51.5e-2734.51uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 1..252
e-value: 2.4E-13
score: 51.9
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28267-RACarg28267-RAmRNA