Carg28241 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28241
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP synthase subunit beta, chloroplastic
Location	Carg_Chr13: 5035478 .. 5035767 (+)
RNA-Seq Expression	Carg28241
Synteny	Carg28241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGAGCTTCTCTCGTCCTAATTTTCAAGGTACTTGGAGAGCCCATTGAGAATTTGGGTCCTGTAGATACTCGCACAAGATCTCCTATTCATAGATCTGCCCCTGCTTTTATACAGTTATTAGATACAACTCTATTTTAGAAAGAGGAATGAAAGTAGTAGATCTTTTAGCCCCTTATCGCCGTGGAGTCAAAATAGGACTATTGGTAGGGGCTGGAGTGTCCAGTACTCATTATAGAATTGATCAATCAACAACATTGCCCAAGCTCATGAAGGTGTATCCGTATTTG

mRNA sequence

GTCGGAGCTTCTCTCGTCCTAATTTTCAAGGTACTTGGAGAGCCCATTGAGAATTTGGGTCCTGTAGATACTCGCACAAGATCTCCTATTCATAGATCTGCCCCTGCTTTTATACAATACAACTCTATTTTAGAAAGAGGAATGAAAGTAGTAGATCTTTTAGCCCCTTATCGCCGTGGAGTCAAAATAGGACTATTGGTAGGGGCTGGAGTGTCCAGTACTCATTATAGAATTGATCAATCAACAACATTGCCCAAGCTCATGAAGGTGTATCCGTATTTG

Coding sequence (CDS)

GTCGGAGCTTCTCTCGTCCTAATTTTCAAGGTACTTGGAGAGCCCATTGAGAATTTGGGTCCTGTAGATACTCGCACAAGATCTCCTATTCATAGATCTGCCCCTGCTTTTATACAATACAACTCTATTTTAGAAAGAGGAATGAAAGTAGTAGATCTTTTAGCCCCTTATCGCCGTGGAGTCAAAATAGGACTATTGGTAGGGGCTGGAGTGTCCAGTACTCATTATAGAATTGATCAATCAACAACATTGCCCAAGCTCATGAAGGTGTATCCGTATTTG

Protein sequence

VGASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYNSILERGMKVVDLLAPYRRGVKIGLLVGAGVSSTHYRIDQSTTLPKLMKVYPYL

Homology

[Close]

BLAST of Carg28241 vs. NCBI nr
Match: THU42950.1 (hypothetical protein C4D60_Mb00t04240 [Musa balbisiana])

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-21
Identity = 59/91 (64.84%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDT T SPIHR APAFIQ     SI E G+K VDLLAPYR
Sbjct: 26  GATLGRIFNVLGEPVDNLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKAVDLLAPYR 85

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMK 90
           RG KIGL  GAGV  T   ++   TLPKLM+
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINTLPKLMR 116

[Close]

BLAST of Carg28241 vs. NCBI nr
Match: VVW90775.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 59/95 (62.11%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT SPIHR APAF Q +   SI E G+KVVDLLAPYR
Sbjct: 26  GATLGRIFNVLGEPVDNLGPVDTRTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 85

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMKVYPY 94
           RG KIGL  GAGV  T   ++    + K   VYPY
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGVYPY 120

[Close]

BLAST of Carg28241 vs. NCBI nr
Match: VVW89792.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 59/95 (62.11%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT SPIHR APAF Q +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTRTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMKVYPY 94
           RG KIGL  GAGV  T   ++    + K   VYPY
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGVYPY 198

[Close]

BLAST of Carg28241 vs. NCBI nr
Match: AEH26951.1 (ATP synthase beta subunit, partial [Goetzea elegans])

HSP 1 Score: 111.7 bits (278), Expect = 3.5e-21
Identity = 58/76 (76.32%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRTRSPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 90  GATLGRIFNVLGEPIDNLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 149

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 150 RGGKIGLFGGAGVGKT 165

[Close]

BLAST of Carg28241 vs. NCBI nr
Match: CAB89703.1 (ATP synthase beta subunit [Zygogynum pauciflorum])

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21
Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRTRSPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTRTRSPIHRSAPAFIQLDTRLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy Swiss-Prot
Match: A8SEB0 (ATP synthase subunit beta, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=atpB PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 56/76 (73.68%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT+SPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy Swiss-Prot
Match: Q4VZI5 (ATP synthase subunit beta, chloroplastic OS=Cucumis sativus OX=3659 GN=atpB PE=3 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRT SPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy Swiss-Prot
Match: Q85V26 (ATP synthase subunit beta, chloroplastic OS=Hyacinthoides non-scripta OX=81762 GN=atpB PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRT SPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy Swiss-Prot
Match: Q09X10 (ATP synthase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=atpB PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRT SPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy Swiss-Prot
Match: P05037 (ATP synthase subunit beta, chloroplastic OS=Pisum sativum OX=3888 GN=atpB PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRT SPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. ExPASy TrEMBL
Match: A0A4S8I528 (ATP-synt_ab domain-containing protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t04240 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-22
Identity = 59/91 (64.84%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDT T SPIHR APAFIQ     SI E G+K VDLLAPYR
Sbjct: 26  GATLGRIFNVLGEPVDNLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKAVDLLAPYR 85

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMK 90
           RG KIGL  GAGV  T   ++   TLPKLM+
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINTLPKLMR 116

[Close]

BLAST of Carg28241 vs. ExPASy TrEMBL
Match: A0A5K1HQE5 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30491 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.9e-22
Identity = 59/95 (62.11%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT SPIHR APAF Q +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTRTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMKVYPY 94
           RG KIGL  GAGV  T   ++    + K   VYPY
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGVYPY 198

[Close]

BLAST of Carg28241 vs. ExPASy TrEMBL
Match: A0A5K1HT13 (ATP-synt_ab domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30758 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.9e-22
Identity = 59/95 (62.11%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT SPIHR APAF Q +   SI E G+KVVDLLAPYR
Sbjct: 26  GATLGRIFNVLGEPVDNLGPVDTRTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 85

Query: 62  RGVKIGLLVGAGVSSTHYRIDQSTTLPKLMKVYPY 94
           RG KIGL  GAGV  T   ++    + K   VYPY
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGVYPY 120

[Close]

BLAST of Carg28241 vs. ExPASy TrEMBL
Match: I3NTC7 (ATP synthase subunit beta (Fragment) OS=Goetzea elegans OX=70013 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 58/76 (76.32%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEPI+NLGPVDTRTRSPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 90  GATLGRIFNVLGEPIDNLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 149

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 150 RGGKIGLFGGAGVGKT 165

[Close]

BLAST of Carg28241 vs. ExPASy TrEMBL
Match: R4QSK3 (ATP synthase subunit beta (Fragment) OS=Chamaescilla sp. Chase 2208 OX=231482 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-21
Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRTRSPIHRSAPAFIQ +   SI E G+KVVDLLAPYR
Sbjct: 94  GATLGRIFNVLGEPVDNLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 153

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 154 RGGKIGLFGGAGVGKT 169

[Close]

BLAST of Carg28241 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2   GASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQYN---SILERGMKVVDLLAPYR 61
           GA+L  IF VLGEP++NLGPVDTRT SPIH+SAPAFI+ +   SI E G+KVVDLLAPYR
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYR 163

Query: 62  RGVKIGLLVGAGVSST 75
           RG KIGL  GAGV  T
Sbjct: 164 RGGKIGLFGGAGVGKT 179

[Close]

BLAST of Carg28241 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 3   ASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQY---NSILERGMKVVDLLAPYRR 62
           A+L  I  VLGEPI+  G + T    PIHR APA +       IL  G+KVVDLLAPY+R
Sbjct: 164 ATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQR 223

Query: 63  GVKIGLLVGAGVSST 75
           G KIGL  GAGV  T
Sbjct: 224 GGKIGLFGGAGVGKT 238

[Close]

BLAST of Carg28241 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 3   ASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQY---NSILERGMKVVDLLAPYRR 62
           A+L  I  VLGEPI+  G + T    PIHR APA +       IL  G+KVVDLLAPY+R
Sbjct: 167 ATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQR 226

Query: 63  GVKIGLLVGAGVSST 75
           G KIGL  GAGV  T
Sbjct: 227 GGKIGLFGGAGVGKT 241

[Close]

BLAST of Carg28241 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 3   ASLVLIFKVLGEPIENLGPVDTRTRSPIHRSAPAFIQY---NSILERGMKVVDLLAPYRR 62
           A+L  I  VLGEPI+  G + T    PIHR APA +       IL  G+KVVDLLAPY+R
Sbjct: 164 ATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQR 223

Query: 63  GVKIGLLVGAGVSST 75
           G KIGL  GAGV  T
Sbjct: 224 GGKIGLFGGAGVGKT 238

The following BLAST results are available for this feature:

BLAST of Carg28241 vs. NCBI nr


Match Name	E-value	Identity	Description
THU42950.1	1.6e-21	64.84	hypothetical protein C4D60_Mb00t04240 [Musa balbisiana]	[more]
VVW90775.1	2.0e-21	62.11	unnamed protein product, partial [Nymphaea colorata]	[more]
VVW89792.1	2.0e-21	62.11	unnamed protein product, partial [Nymphaea colorata]	[more]
AEH26951.1	3.5e-21	76.32	ATP synthase beta subunit, partial [Goetzea elegans]	[more]
CAB89703.1	4.5e-21	75.00	ATP synthase beta subunit [Zygogynum pauciflorum]	[more]

BLAST of Carg28241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8SEB0	1.3e-23	73.68	ATP synthase subunit beta, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=at...	[more]
Q4VZI5	2.3e-23	75.00	ATP synthase subunit beta, chloroplastic OS=Cucumis sativus OX=3659 GN=atpB PE=3...	[more]
Q85V26	2.3e-23	75.00	ATP synthase subunit beta, chloroplastic OS=Hyacinthoides non-scripta OX=81762 G...	[more]
Q09X10	2.3e-23	75.00	ATP synthase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=atpB PE=3 ...	[more]
P05037	2.3e-23	75.00	ATP synthase subunit beta, chloroplastic OS=Pisum sativum OX=3888 GN=atpB PE=3 S...	[more]

BLAST of Carg28241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4S8I528	7.6e-22	64.84	ATP-synt_ab domain-containing protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t...	[more]
A0A5K1HQE5	9.9e-22	62.11	Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30...	[more]
A0A5K1HT13	9.9e-22	62.11	ATP-synt_ab domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 ...	[more]
I3NTC7	1.7e-21	76.32	ATP synthase subunit beta (Fragment) OS=Goetzea elegans OX=70013 GN=atpB PE=3 SV...	[more]
R4QSK3	2.2e-21	75.00	ATP synthase subunit beta (Fragment) OS=Chamaescilla sp. Chase 2208 OX=231482 GN...	[more]

BLAST of Carg28241 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	1.0e-23	71.05	ATP synthase subunit beta	[more]
AT5G08670.1	2.0e-14	54.67	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	2.0e-14	54.67	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	2.0e-14	54.67	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12240		coord: 3..89 e-value: 5.4E-15 score: 56.9
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 2..74
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 2..74
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28241-RA	Carg28241-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism