Carg28233 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28233
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBTB/POZ domain-containing protein
LocationCarg_Chr18: 6971352 .. 6977115 (+)
RNA-Seq ExpressionCarg28233
SyntenyCarg28233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTTTGCAAAGTTATGATCGTTGACTCTTAGCTAGAAGCTTTGCAACGACGTTGCCCGCCGATCACGTATGGATGTTTTATCAGGAATTCAACTCTTTTCTCAAGGGTAAATCATTCAAATGATTGGCTTATAAACTTCGAACCTCTAATAAGACCATAAGTAAACTAATTTTACACTTAAATTTTGAGAATTTTAGAAACAATCTGTTTATAAGACTTACTGATAAGTTACACGTAACGAAACAACTATAGTAAAAATTGGTAGTAGTAGTGCTAAATTGTAGACCATTTTATGGCCTTAGTAGATAAGTTTTTGATGTTTGTAATTATAACATTATCGTGAGTGGTTCTTTACTTTGGGAGAAAGTTTAGGAAGCTTATTTAGTGCTTTCTCCGACTCTACATATACATGAGATGTATGTTTTTTCAATAACAAAGAAAAAATGAAGAGCTAAATGCTTTTTTTTTTGGTCCAGAGATCCTCTCTTCAAGGTATTCCCATTGGTCTCTTTTATTTGTTTCCCACATAAGTTTGATCAAGGGTCACATCCAATATTTGGTATTAGAGAATATTAAGATACCGAAACAAAATCTCTTTACCCATAAAAAGTCACTGAAGGAGAAGTGACAACAATTAAAGAGCGGAAGGAGGGGAGTGTTAATGCTCAAGTACCCGTTACTGCACGAAGCAGTAAACTACGCAGCATGGTCGATAACAGGTGCGTGTCAACTTATAAGGCACAAGGCATAATGGGACGCCATTAGACCATGGATGACGTTGAGGCGAGCATAAGGATAGAATGGCTCTTGCCGCACTACGCAAGGCAGTCCGGAGGACGTTCTTCTCATGTTGGAGAGAAAGGACTCGACAAAGGCAGTGTCGGGAGACGGCTGCAAACCATGCATGTGGGTGTTGGAACGTTGTCAAGGAGCAAAGTGTGCAGACCTTGAAGGAGTAAGTCTTACTATCCCATGAAGGACGGTGAGTCAATAGATGACTTTACCATGAAGTTGATGACGATCGTTTAGCGGCATCTGTTCATTAGGCCGGCATGGTGGAAGAAATCTTCGTCGTCAGGAAGTTCCTTCGAGTTGTTTCCCCCCAAGATTTCATGCAAATTGTTACCTCCATCGAGCAGTTCGGTGACTTCAAGATTATATTCAAATGAGGAGGTTGTTGGTTCGTCTTAAGGTCCATGAAGAGAGATCTCACTTCGTGGTTATTAAGACAAATAGAAGGAGAAACACCTCTTACTCACATATGAGGAGTGTCTCGCTCAGACGAAAAGGAATGATGCAGTTGACTCTTCTTTTTCAAGTACGAGAGAACATGGCAGCCATAACAAGGAAAACAGAGGTCGTGTGACGTGCGTGGACATGCTGAGACGTGGTGGCAGAGGAGGTCGTGACAATACCTTCACTATACCCATGACAATTTGCAACCCTTGGAAGGACAAGAGTATGATCAAGATTTACTGCTTGTGGAAAATGATGGGTCACTATGCGGTAGAGTACCTTAAGAAGAAGCAGGTGATGAGGGAGGAAAACCTCACCACGCAGGATCAAGAGCCTGCATGGATTGTTGGCGAGAAGATTGCCCAACCTGTTATGCTCAACAAAGAGAAGGTTATGCAGAGAACCTTCTCACAAAAGAAGAAGACCGTCAAGGAGACCAACATGTGGTACCTAGACAATGAAGCAAACACAACCACATTGGCCAGAGATCGAACTTAAAGTTCAAGGAGCTTGATGAGAAGCTCAGCTGATGGATCCAAGAAAAAATGATCCATCTTGTTCCAGTGCAAGAATACCAAATCTTGACCAAACTTATGCCTGCGAAAGAGAGTAACAGTATCAATTTGGTCAAATGATGGAAGAAGGAGCAGAGTTGGAGTTAGCTGCTGTTCCTCAAGATATCGACAGAAATGAAACCTTTGTTTGTTGAAGGTCAAAATGATCGCATAACCGCCTGTACAGGATACTATAGGAGACCAGTCAACCCACCTCTCTATTGACGAAACTGCAGACCTAGCTTGGCTATGGCATGCAAGACTTGGCACCGTGAAAACCTTTCAAATGCCTTAAAATGATCGCGGAGAGAAGAAAGATGGCTAGGGGCTACCCAAATTCACTACGACCCATAATACAGCTATGTGAAAGTTGCCAAGTCCGGTTCAAACAGTATGCAAGGACTGTCATCCATCTTCAAATAAGTTTTCGTTTCTAACGCGACCACTGCAACTGGTTCATGCGCAGATTTGTGTAGGTTTCGATCGACTCTGCATCATTGATTGTTTGGGTAATAAGTATTATTTCTCTTCTTGGTTCACGATTATAGTCGTTGGATGTGCTGTACATTGCTCAAGAGATAAAAGGAGAGAGCATTATGTGCGTTTCAATGAATTTCAAAAGAACTAGTTAAAAACGGGTCTGATCAATTAAAACCTTCGCGCAAAACTGAGGTTGGCAAGTTCTTATTACCTAAAAACTTCTCAAAGTTTTGTGAATGAGATAGATATCAAGCGTCAACTCACTGTACCGTACACTCACACAACAACGGGGTGGGTCGAACACGAAGAAATCGCACCATAATGAACTCTGGAAAGAAGCTTACTCAAAGAGCATGCAAGTCTCGACAATTTTCTGGGCGAGGCAATACGACATGTGGTTTATCTTTTAAATTCATTTTACCCGACAAAGCGCTAGACATTTGATGCCCCTCCTACAAAGCCCCATGGTTCGTAAGAACCTCACTTCGAGTACCTAAGAGCTTTTCGTGTGTACAACACACTTGTTAAAGACTGCAAAAGCTCTAATATAAAAAAGCTTGATGACAGGAGCCAAAAGATGGTGTACTTTGCGTAGAGGATGGGACCAAAGCACACAGGTTGTATGATCGCAATCTGAGAAAATTCATGTAAGTAGAGATGTCGTATTCGAGAAGAGAAGAGTGAGATTGGTGCAGCGTTGGCGATAACAAACAGATTGTTATAGAGTTCATTTAACCTGAAAGACAGAGAGAGATGCAACAGACCTAAAAAGTAACCCTACAGAGCCAGCAAACAACAACAACAACAAGTGCACACATGTTTATTACGGTGACACTGATACGCATGATGGACTCTCTAAAACAAGAGAGCTCAGACGAGCGCATAGGAGGATCCACAATAGAGGATGAACCAAAGAAGTTTTGTTCTCTTGCTGAAATTTAATGCGGACACACTTGAAGAAGAATCTGGATCCCGATGAGTTAATGTTGCTTGCAGCCAAGGAGTCAAACAACTATCATGAGGCAACAACTGAGACAATGTGGCAGGAGAGACCATTGCAAAAGGAGCTTGACCATTGAGAAGAACAATACTTAGGCACTAACTAACTTACCGTCCGGATACAAGCCCATTGGTTTGATGTAGGTGTTTAAGTTGAAGAAGAATAATGAAGGAAACGTCATCAAACATAAAGCAAGACTCGTGGCGAAGGGATACGTGCAATGACAAGGAGTTGATTTTGAGGAGGTTTTCGCGCTTGTGGCTAGACTAGACACTATAAGGTTTATTCTTGCCCTTGCAGCTCAACACGGGTTGGAAGTCCATCACTTGGATGTCAAATCAACATTCCTAAATGGTGACCTCCAAGTAGAAGTGTATGTTGTCCAACTTGAAGGGTTTGTCATCAAAGCCGAAGAGCACAAAGTGTACAAGTTGTCAAATACCCTCTACGGTTTACGGCAAGTGTCGAGGGCGTGGAACATATGTTTGAACAAGAGCTTAAAGAGTTTAAACTTCATAAAGTGCTCACAAGAACAATTAGTGTATACAAGAAACGACGGGGCTGAAACACTCATAGTTGGTATGTACGTTGATGACCTGATCTTCACTTGTACAAGTGTGGAAGACGTCAAAGAGTTCAAGAAGAAAATGATGAAAGAATTTGAAATGACTGGTCTCAGGTTACTCACGTACTACCACAATATTGAAGTTGACCAAATGATATATTGCATCATGCTAAAGCAATCAACCTATGTTAAGAAGTTGTTGCAGTAATTTAAGATGACAGAGTACAACCTGACCAAGTATCTCATGGAAGCAGAGTTACAACTCGGGAAAGATGTTGAAAGAAGCTTGGTGAATTCCGCTAAGTATAGGCGTGTCATCGGAAGTCTAAGGTACTTGACTCGTACTCATCCGGACCTTTCATATGCTATTGGAATAGTGAATGCAGAATAGTGAATAGGTGCATGGAAAAGCCCACTATGATGCATCATCAAGCGGTTAAGCACATTCTACGTGTGAAGGAAACCTCAAGCTACGGGTTGAAGTATCAAATAAGGCGATGTCCTGAAAAACTAGTCAGTTTTACCAATAGTGATTTAGTAGGAGACATTGACAATAGAAAAAACACGATAGAAAGGACGTTTTTATCGTCAACGAAAATTTAATCTCTTGGAAAACCTCAGAAGCAGTGAATCTAAGACACTATCTTCCTGTGTGGTCAAAGTTCATGGCAACAACTACAGCGTTGTGTGGCAAGCATTGTAGCTGAGAAATTTGTTGAATGATGTGACTAGAAGTGAACTAAAACCCAGTAACTCCTCTACGTGACAACAAATCTGCAATTGTACTGATGAAGAATCCAGTATTTCACTGACACAGCAAAACACATTGATACTCGCTTCCACTTCATCTGTGAGTATGTTAAGAAGAGACCAATGATTGTGAAGTTCTATGCACTAGAAAAGCAACATGTTGATATATTCTAACTAAGGCCCTAGCAAGAGTAAGTTTGTAGAGATGCAGGGAATTGCTAGGAGTGAAGAATCTTTGAACAAAGTCAAAGTTTACGAAGGAGATTGTGAAGTTATAAACTTGACTTAGTAGAATAAGTCACTAACTTATAGAGTAACTTTATGAGAATTGTTAGTACACTTAGTCGAATAAGTTACTAGCTTATGGAGCAACTACATGAGAATGGGTAGTAGTTTCCAAATCGTGGACCAAGTTTTGTAGTTGTGGACTAAGTTTTATATTTTAATTAGGAAGATCGTTAGTGGTTTTAACTTGAGGAGAAAGTTTAGGAAGCTAGCTTGTTAGTGCTTTCTCCAACGTAAATACTCTTGAGAGATATGTTTTTTCACAACAACAAAGAGAATTGAAAAGCTAAGTACTTAAATTTTTTTTTTCTCCAAAAGATCTCTCCCCTCAATATATTCCTTTGCCTCTTATACATGTTTTGACATAATTCCGATCGAGGATCACATCCAACAAACACTACTGTAGGAATGAATTGAGTGGATATTTTTAACTTTATTTTTTTTATTTTTTTTTGTTCATCCTTATCTCCGCTCCTAAATGCTTGGGGAACTCATTTGTTGTAGGAGCATCCATATCTAAGCAAAGCTGATAAAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCGCTTGAATCACGAAGGAATCCATAGTATAGAAAAGGGATTGAGATGCGCCATGATCTCCCTTGCATTTCCAGGGTTCATGCTGTTC

mRNA sequence

ATGCATGAGCATCCATATCTAAGCAAAGCTGATAAAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCGCTTGAATCACGAAGGAATCCATAGTATAGAAAAGGGATTGAGATGCGCCATGATCTCCCTTGCATTTCCAGGGTTCATGCTGTTC

Coding sequence (CDS)

ATGCATGAGCATCCATATCTAAGCAAAGCTGATAAAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCGCTTGAATCACGAAGGAATCCATAG

Protein sequence

MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Homology
[Close]
BLAST of Carg28233 vs. NCBI nr
Match: KAG7012676.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 109

[Close]
BLAST of Carg28233 vs. NCBI nr
Match: KAG6573578.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 3.9e-48
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 414 LKEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 473

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 474 RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 522

[Close]
BLAST of Carg28233 vs. NCBI nr
Match: XP_022945939.1 (BTB/POZ domain-containing protein At5g47800-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 8.6e-48
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKAD+KRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 416 LKEHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 475

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 476 RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 524

[Close]
BLAST of Carg28233 vs. NCBI nr
Match: XP_022945940.1 (BTB/POZ domain-containing protein At5g47800-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 8.6e-48
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKAD+KRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 414 LKEHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 473

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 474 RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 522

[Close]
BLAST of Carg28233 vs. NCBI nr
Match: XP_022967073.1 (BTB/POZ domain-containing protein At5g47800-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 415 LKEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 474

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSR DEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 475 RVAAASDELRSRPDEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 523

[Close]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match: Q9FIK1 (BTB/POZ domain-containing protein At5g47800 OS=Arabidopsis thaliana OX=3702 GN=At5g47800 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 4   HPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSSRVA 63
           HP +SK +KKRLCR L+CQKLSA VRAHAVKNER+PLRTVVQ LFF+QE G+   SSR  
Sbjct: 427 HPEISKEEKKRLCRSLDCQKLSAQVRAHAVKNERMPLRTVVQALFFDQESGSKGASSR-- 486

Query: 64  AASDELRSRADE 76
           + S EL +R  E
Sbjct: 487 SESQELFTRGKE 496

[Close]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match: Q0WL52 (BTB/POZ domain-containing protein NPY5 OS=Arabidopsis thaliana OX=3702 GN=NPY5 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-15
Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHP ++K++KKR+CR+++C+KLSA+  AHAV+NERLP+R VVQVLFFEQ + N+  SS
Sbjct: 413 LKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQVRANNNGSS 472

Query: 61  RVAAASDEL 70
               ++ E+
Sbjct: 473 STGNSTPEV 481

[Close]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match: O64814 (BTB/POZ domain-containing protein NPY4 OS=Arabidopsis thaliana OX=3702 GN=NPY4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.1e-12
Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTS 60
           + EH  +SK++KKR+C +++C+KLSA+   HAV+NERLP+R +VQVLFFEQ + N  ++
Sbjct: 398 LKEHSGISKSEKKRVCGLMDCRKLSAEACEHAVQNERLPMRVIVQVLFFEQIRANGSST 456

[Close]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match: Q9FMF5 (Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-12
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 4   HPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEK 54
           HP LS+ ++KRLCRV++CQKLS D   HA +NERLPLR VVQVLF EQ K
Sbjct: 556 HPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVK 605

[Close]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match: Q8H1D3 (BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana OX=3702 GN=NPY1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           M EHP L+K++KKRLC +++ +KL+ +   HA +NERLPLR VVQVL+FEQ + N    +
Sbjct: 416 MKEHPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRANHSPVA 475

Query: 61  RVAAASDELRSRADEKLRRSASTR 85
            VAA+S     + +E     A+ +
Sbjct: 476 SVAASSHSPVEKTEENKGEEATKK 499

[Close]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match: A0A6J1G2C6 (BTB/POZ domain-containing protein At5g47800-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450031 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKAD+KRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 416 LKEHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 475

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 476 RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 524

[Close]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match: A0A6J1G2E9 (BTB/POZ domain-containing protein At5g47800-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450031 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKAD+KRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 414 LKEHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 473

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 474 RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 522

[Close]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match: A0A6J1HPR2 (BTB/POZ domain-containing protein At5g47800-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466584 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 417 LKEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 476

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSR DEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 477 RVAAASDELRSRPDEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 525

[Close]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match: A0A6J1HU26 (BTB/POZ domain-containing protein At5g47800-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466584 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS
Sbjct: 415 LKEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 474

Query: 61  RVAAASDELRSRADEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 110
           RVAAASDELRSR DEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP
Sbjct: 475 RVAAASDELRSRPDEKLRRSASTRSRHKVAEADKDEMNTKHSLESRRNP 523

[Close]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match: A0A6J1CLM4 (BTB/POZ domain-containing protein At5g47800-like OS=Momordica charantia OX=3673 GN=LOC111012589 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21
Identity = 74/132 (56.06%), Postives = 86/132 (65.15%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHP +SKA+KKRLCRVLNCQKLS +VRAHAVKNERLPLRTVVQVLFF+Q+KG SKTSS
Sbjct: 440 LKEHPDVSKAEKKRLCRVLNCQKLSPEVRAHAVKNERLPLRTVVQVLFFDQDKG-SKTSS 499

Query: 61  RVAAASDE-----------------------LRSRADEKLRRSASTRSRHKVAEADKDE- 108
           RVAAA+ E                        R   DEKLRRS ST+SR    ++D D+ 
Sbjct: 500 RVAAAATEEVLLSRPKPKQRPATATGENLSLSRPGPDEKLRRSESTKSRPTKEKSDHDQK 559

[Close]
BLAST of Carg28233 vs. TAIR 10
Match: AT5G47800.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 4   HPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSSRVA 63
           HP +SK +KKRLCR L+CQKLSA VRAHAVKNER+PLRTVVQ LFF+QE G+   SSR  
Sbjct: 427 HPEISKEEKKRLCRSLDCQKLSAQVRAHAVKNERMPLRTVVQALFFDQESGSKGASSR-- 486

Query: 64  AASDELRSRADE 76
           + S EL +R  E
Sbjct: 487 SESQELFTRGKE 496

[Close]
BLAST of Carg28233 vs. TAIR 10
Match: AT4G37590.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-16
Identity = 37/69 (53.62%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           + EHP ++K++KKR+CR+++C+KLSA+  AHAV+NERLP+R VVQVLFFEQ + N+  SS
Sbjct: 413 LKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQVRANNNGSS 472

Query: 61  RVAAASDEL 70
               ++ E+
Sbjct: 473 STGNSTPEV 481

[Close]
BLAST of Carg28233 vs. TAIR 10
Match: AT2G23050.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-13
Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTS 60
           + EH  +SK++KKR+C +++C+KLSA+   HAV+NERLP+R +VQVLFFEQ + N  ++
Sbjct: 398 LKEHSGISKSEKKRVCGLMDCRKLSAEACEHAVQNERLPMRVIVQVLFFEQIRANGSST 456

[Close]
BLAST of Carg28233 vs. TAIR 10
Match: AT5G64330.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 71.2 bits (173), Expect = 5.6e-13
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 4   HPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEK 54
           HP LS+ ++KRLCRV++CQKLS D   HA +NERLPLR VVQVLF EQ K
Sbjct: 556 HPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVK 605

[Close]
BLAST of Carg28233 vs. TAIR 10
Match: AT4G31820.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-12
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0 

Query: 1   MHEHPYLSKADKKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSS 60
           M EHP L+K++KKRLC +++ +KL+ +   HA +NERLPLR VVQVL+FEQ + N    +
Sbjct: 416 MKEHPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRANHSPVA 475

Query: 61  RVAAASDELRSRADEKLRRSASTR 85
            VAA+S     + +E     A+ +
Sbjct: 476 SVAASSHSPVEKTEENKGEEATKK 499

The following BLAST results are available for this feature:
BLAST of Carg28233 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012676.11.6e-49100.00BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6573578.13.9e-4898.17BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022945939.18.6e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X1 [Cucurbita moschata][more]
XP_022945940.18.6e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X2 [Cucurbita moschata][more]
XP_022967073.11.5e-4797.25BTB/POZ domain-containing protein At5g47800-like isoform X2 [Cucurbita maxima][more]
BLAST of Carg28233 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIK11.6e-1766.67BTB/POZ domain-containing protein At5g47800 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q0WL524.5e-1553.62BTB/POZ domain-containing protein NPY5 OS=Arabidopsis thaliana OX=3702 GN=NPY5 P... [more]
O648146.1e-1252.54BTB/POZ domain-containing protein NPY4 OS=Arabidopsis thaliana OX=3702 GN=NPY4 P... [more]
Q9FMF57.9e-1268.00Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2[more]
Q8H1D31.8e-1144.05BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana OX=3702 GN=NPY1 P... [more]
BLAST of Carg28233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2C64.2e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X1 OS=Cucurbita moschat... [more]
A0A6J1G2E94.2e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X2 OS=Cucurbita moschat... [more]
A0A6J1HPR27.1e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1HU267.1e-4897.25BTB/POZ domain-containing protein At5g47800-like isoform X2 OS=Cucurbita maxima ... [more]
A0A6J1CLM41.1e-2156.06BTB/POZ domain-containing protein At5g47800-like OS=Momordica charantia OX=3673 ... [more]
BLAST of Carg28233 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47800.11.2e-1866.67Phototropic-responsive NPH3 family protein [more]
AT4G37590.13.2e-1653.62Phototropic-responsive NPH3 family protein [more]
AT2G23050.14.3e-1352.54Phototropic-responsive NPH3 family protein [more]
AT5G64330.15.6e-1368.00Phototropic-responsive NPH3 family protein [more]
AT4G31820.11.3e-1244.05Phototropic-responsive NPH3 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027356NPH3 domainPFAMPF03000NPH3coord: 2..27
e-value: 1.9E-7
score: 31.0
IPR027356NPH3 domainPROSITEPS51649NPH3coord: 1..53
score: 26.289692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..109
NoneNo IPR availablePANTHERPTHR32370:SF106BTB/POZ DOMAIN-CONTAINING PROTEINcoord: 2..98
IPR043454NPH3/RPT2-like familyPANTHERPTHR32370OS12G0117600 PROTEINcoord: 2..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28233-RACarg28233-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination