Carg28231 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28231
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCarg_Chr12: 6867525 .. 6868118 (-)
RNA-Seq ExpressionCarg28231
SyntenyCarg28231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCTCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAATCTAA

mRNA sequence

ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCTCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAATCTAA

Coding sequence (CDS)

ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCTCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAATCTAA

Protein sequence

MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRTACFTEI
Homology
BLAST of Carg28231 vs. NCBI nr
Match: KAG7020792.1 (hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.9 bits (1008), Expect = 1.6e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSKDKEFKRTACFTEI
Sbjct: 181 YLSKDKEFKRTACFTEI 197

BLAST of Carg28231 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo] >KAG6586016.1 hypothetical protein SDJN03_18749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.6 bits (1002), Expect = 8.1e-105
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPAR NILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSKDKEFKRTACFTE+
Sbjct: 181 YLSKDKEFKRTACFTEV 197

BLAST of Carg28231 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLS RPAR NILRYVILVLVALIVLVGLVVLIIWLTVRPKRL YTVESAAVHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIR+KVGVWK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSKDKEFKRTACFTE+
Sbjct: 181 YLSKDKEFKRTACFTEV 197

BLAST of Carg28231 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 uncharacterized protein E6C27_scaffold43053G00810 [Cucumis melo var. makuwa] >TYK20878.1 uncharacterized protein E5676_scaffold284G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86
Identity = 160/197 (81.22%), Postives = 176/197 (89.34%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSK K FK+T CFTE+
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

BLAST of Carg28231 vs. NCBI nr
Match: KAE8652783.1 (hypothetical protein Csa_022856 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 9.4e-85
Identity = 158/197 (80.20%), Postives = 176/197 (89.34%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 27  MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 86

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 87  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 146

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 147 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 206

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSK K FK+T CFTE+
Sbjct: 207 YLSKSKTFKKTTCFTEV 223

BLAST of Carg28231 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.4e-27
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 0

Query: 13  RSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT--QLNASF 72
           R N +  +I+ LV L +LVGL +LI +LT+RPKRL YTVE+A+V  F +      +NA F
Sbjct: 33  RMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKF 92

Query: 73  NFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLL 132
           ++ +K+YNP +HVSV Y  + ++    +Q +A   I PF Q  K+ T +   L + N  L
Sbjct: 93  SYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVAL 152

Query: 133 HDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDK--EF 192
               ++DL  EK+ G ++++++I AR+ +K  +++S  RTL+  C+PV++ ++      F
Sbjct: 153 SKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGF 212

Query: 193 KRTACFTEI 198
           +R  C T +
Sbjct: 213 QRVLCKTRL 221

BLAST of Carg28231 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-15
Identity = 37/153 (24.18%), Postives = 83/153 (54.25%), Query Frame = 0

Query: 33  LVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQ---LNASFNFGVKAYNPNRHVSVYYDH 92
           L++ ++WL + P+R  +++  A +++ +++T+    LN+S    + + NPN+ V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  VTVTVGF-GDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAAGEMD 152
           + V   + G Q  +   + PFYQ H+++  L   L      +  S    ++ E++ G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W SG     + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

BLAST of Carg28231 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 0

Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT---QLNASFNF 75
           IL  +  +L+ + VL+G+  LIIWL  RP  + + V  A +  F +  T   + N   NF
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGV---IKPFYQPHKDVTWLNMDLNAKNFL 135
            ++  NPNR + VYYD + V   +GDQ   FG+   I  FYQ HK+ T +   L  +  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKE- 194
           L D    KDL  +  +    +D  ++ +IRFK G+ KS     +I+C   +   S     
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

BLAST of Carg28231 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 47/171 (27.49%), Postives = 91/171 (53.22%), Query Frame = 0

Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFG-- 75
           +L   + V+++LIV++G+  LI WL VRP+ + + V  A++  FD ++      +N    
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 76  VKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDS 135
           V   NPN+ + +YYD +     +  +  +   + PFYQ HK+ T L      +N ++ ++
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 136 -VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLS 184
             S+ L  E+ +G  ++++  + R+RFK+G  K      ++ C  + + LS
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLS 207

BLAST of Carg28231 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = 0

Query: 27  LIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDM-STTQLNASFNFGVKAYNPNRHVSV 86
           LIVL G+   +++L  RP+   Y++E  +V   ++ ST+ ++ SFN  V++ N N  + V
Sbjct: 85  LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV 144

Query: 87  YYD-HVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAA 146
           YY+   +V V + D D++ GV+  FYQP K+VT + + L+     L   + K++  E + 
Sbjct: 145 YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSK 204

Query: 147 GEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRTACFTEI 198
             +   L IKA ++ K G  K+    + + C   +  L+         C  ++
Sbjct: 205 KTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDV 257

BLAST of Carg28231 vs. ExPASy TrEMBL
Match: A0A6J1FH28 (uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-105
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPAR NILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSKDKEFKRTACFTE+
Sbjct: 181 YLSKDKEFKRTACFTEV 197

BLAST of Carg28231 vs. ExPASy TrEMBL
Match: A0A6J1I194 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.3e-103
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLS RPAR NILRYVILVLVALIVLVGLVVLIIWLTVRPKRL YTVESAAVHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIR+KVGVWK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSKDKEFKRTACFTE+
Sbjct: 181 YLSKDKEFKRTACFTEV 197

BLAST of Carg28231 vs. ExPASy TrEMBL
Match: A0A5D3DBK2 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00070 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 160/197 (81.22%), Postives = 176/197 (89.34%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSK K FK+T CFTE+
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

BLAST of Carg28231 vs. ExPASy TrEMBL
Match: A0A1S3CLP6 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 160/197 (81.22%), Postives = 176/197 (89.34%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSK K FK+T CFTE+
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

BLAST of Carg28231 vs. ExPASy TrEMBL
Match: A0A0A0LVK3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.5e-85
Identity = 158/197 (80.20%), Postives = 176/197 (89.34%), Query Frame = 0

Query: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEI 198
           YLSK K FK+T CFTE+
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

BLAST of Carg28231 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-38
Identity = 75/186 (40.32%), Postives = 125/186 (67.20%), Query Frame = 0

Query: 13  RSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMST-TQLNASFN 72
           R +++ Y+ LV++ LI +  +  LI WL  +PK+L YTVE+A+V NF+++    ++A+F 
Sbjct: 22  RPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQ 81

Query: 73  FGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLH 132
           F ++++NPN  +SVYY  V + V F DQ LAF  ++PF+QP  +V  ++  L A+N  + 
Sbjct: 82  FTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVS 141

Query: 133 DSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRT 192
            S  KDL  + + G++  ++++KAR+RFKVG+WKS HRT +I+CS V V LS+  + + +
Sbjct: 142 KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNS 201

Query: 193 ACFTEI 198
           +C  +I
Sbjct: 202 SCDADI 207

BLAST of Carg28231 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 0

Query: 13  RSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT--QLNASF 72
           R N +  +I+ LV L +LVGL +LI +LT+RPKRL YTVE+A+V  F +      +NA F
Sbjct: 33  RMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKF 92

Query: 73  NFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLL 132
           ++ +K+YNP +HVSV Y  + ++    +Q +A   I PF Q  K+ T +   L + N  L
Sbjct: 93  SYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVAL 152

Query: 133 HDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDK--EF 192
               ++DL  EK+ G ++++++I AR+ +K  +++S  RTL+  C+PV++ ++      F
Sbjct: 153 SKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGF 212

Query: 193 KRTACFTEI 198
           +R  C T +
Sbjct: 213 QRVLCKTRL 221

BLAST of Carg28231 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 81.6 bits (200), Expect = 7.5e-16
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 0

Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT---QLNASFNF 75
           IL  +  +L+ + VL+G+  LIIWL  RP  + + V  A +  F +  T   + N   NF
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGV---IKPFYQPHKDVTWLNMDLNAKNFL 135
            ++  NPNR + VYYD + V   +GDQ   FG+   I  FYQ HK+ T +   L  +  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKE- 194
           L D    KDL  +  +    +D  ++ +IRFK G+ KS     +I+C   +   S     
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

BLAST of Carg28231 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 47/171 (27.49%), Postives = 91/171 (53.22%), Query Frame = 0

Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFG-- 75
           +L   + V+++LIV++G+  LI WL VRP+ + + V  A++  FD ++      +N    
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 76  VKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDS 135
           V   NPN+ + +YYD +     +  +  +   + PFYQ HK+ T L      +N ++ ++
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 136 -VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLS 184
             S+ L  E+ +G  ++++  + R+RFK+G  K      ++ C  + + LS
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLS 207

BLAST of Carg28231 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 78.6 bits (192), Expect = 6.4e-15
Identity = 43/167 (25.75%), Postives = 86/167 (51.50%), Query Frame = 0

Query: 14  SNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFG 73
           + I +++  + + ++  VG++  I+WL++RP R  + ++   V   D  T   NA   F 
Sbjct: 40  TRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFN 99

Query: 74  VKAYNPNRHVSVYYDHVTVTVGFGDQDLA-FGVIKPFYQPHKDVTWLNMDLNAKNFLLHD 133
           V   NPN+H+ VY+D +  ++ + DQ +    ++ PF+Q   + T +   L   +  ++ 
Sbjct: 100 VTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNS 159

Query: 134 SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVI 180
           +   + + ++A G +   L I + IRFK+  W S H  +   C+ V+
Sbjct: 160 NRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVV 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7020792.11.6e-105100.00hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022937555.18.1e-10598.98uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharact... [more]
XP_022969533.11.3e-10296.95uncharacterized protein At1g08160 [Cucurbita maxima][more]
XP_008464346.12.9e-8681.22PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 unchar... [more]
KAE8652783.19.4e-8580.20hypothetical protein Csa_022856 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q8VZ135.4e-2736.51Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P... [more]
Q9FI034.8e-1524.18NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1[more]
Q9FNH61.1e-1432.45NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1[more]
Q9SJ522.4e-1427.49NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
Q9ZVD21.2e-1328.32NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FH283.9e-10598.98uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 ... [more]
A0A6J1I1946.3e-10396.95uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE... [more]
A0A5D3DBK21.4e-8681.22LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3CLP61.4e-8681.22uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S... [more]
A0A0A0LVK34.5e-8580.20LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G22870.13.1e-3840.32Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G08160.13.8e-2836.51Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT5G06320.17.5e-1632.45NDR1/HIN1-like 3 [more]
AT2G35980.11.7e-1527.49Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G05220.16.4e-1525.75Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 74..175
e-value: 2.7E-13
score: 50.3
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 10..196
NoneNo IPR availablePANTHERPTHR31852:SF5GB|AAF18257.1coord: 10..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28231-RACarg28231-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma