Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCACTCCGACCAATAACCTAGCAGCGCTTTTGACGGCGGCGTTTATTATCACCACCGCGGCGCCCTTTGCCAGAGCGGAGACGCACCAAGTCGTCGGCGGCGAGGTAGGGGATGGGACGTGACTCGAACATTTGCGTCTTGGTCGCCGTTTCGAATATTCAGAGTCGGAGATTAAGATCTGTAAGGATCCATTCGTTTTTTCCTTTTTTGTTTTGTTTTTAATGCGGTTTTTGGGGTGAGAAATTTGTTTGGGATTTTCCCGGTTCATCCGATGGAAATTCGGAACTTGGGTTTTATTAAGAGTAAAAATAAAAAAATAAAAAAAATAAAAAATAAAAAAAGTAATGTTGGGGTAAGGTTCGCTGTACTCTGTGGCACACGGTACGTGGTGGAGCTTGGAAAAGGAAGGAGGAATACAGAGCGTGCGATGTTAAGCAGGTCAGTCAAGGAGTATAGGGACGGCATGGATATCGTGGCCTTAAACGGAGAAGGAATCCGCTACTCGCGAGTAGCAGAGCAGAGAAGTGCAAGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCCAACAACAGAAGGCGGAGACGACAGGAGTTGAATCGAGGGACGACATGTCGGAGGGGGATGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCTTTCGCCATTTCTTATGTCACTCTCTCCCTTTTGCTGGCTGGCCTTGCCTTTACTTATTGGATCAGCTAA
mRNA sequence
ATGCCCACTCCGACCAATAACCTAGCAGCGCTTTTGACGGCGGCGTTTATTATCACCACCGCGGCGCCCTTTGCCAGAGCGGAGACGCACCAAGTCGTCGGCGGCGAGGTAGGGGATGGGACGTTCGCTGTACTCTGTGGCACACGGTACGTGGTGGAGCTTGGAAAAGGAAGGAGGAATACAGAGCGTGCGATGTTAAGCAGGTCAGTCAAGGAGTATAGGGACGGCATGGATATCGTGGCCTTAAACGGAGAAGGAATCCGCTACTCGCGAGTAGCAGAGCAGAGAAGTGCAAGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCCAACAACAGAAGGCGGAGACGACAGGAGTTGAATCGAGGGACGACATGTCGGAGGGGGATGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCTTTCGCCATTTCTTATGTCACTCTCTCCCTTTTGCTGGCTGGCCTTGCCTTTACTTATTGGATCAGCTAA
Coding sequence (CDS)
ATGCCCACTCCGACCAATAACCTAGCAGCGCTTTTGACGGCGGCGTTTATTATCACCACCGCGGCGCCCTTTGCCAGAGCGGAGACGCACCAAGTCGTCGGCGGCGAGGTAGGGGATGGGACGTTCGCTGTACTCTGTGGCACACGGTACGTGGTGGAGCTTGGAAAAGGAAGGAGGAATACAGAGCGTGCGATGTTAAGCAGGTCAGTCAAGGAGTATAGGGACGGCATGGATATCGTGGCCTTAAACGGAGAAGGAATCCGCTACTCGCGAGTAGCAGAGCAGAGAAGTGCAAGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCCAACAACAGAAGGCGGAGACGACAGGAGTTGAATCGAGGGACGACATGTCGGAGGGGGATGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCTTTCGCCATTTCTTATGTCACTCTCTCCCTTTTGCTGGCTGGCCTTGCCTTTACTTATTGGATCAGCTAA
Protein sequence
MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGEVGDGTFAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARRASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAGLAFTYWIS
Homology
BLAST of Carg28101 vs. NCBI nr
Match:
KAG7012659.1 (hypothetical protein SDJN02_25412, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGEVGDGTFAVLCGTRYVVELGKGRRN 60
MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGEVGDGTFAVLCGTRYVVELGKGRRN
Sbjct: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGEVGDGTFAVLCGTRYVVELGKGRRN 60
Query: 61 TERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARRASNCRCMWRPQQQKAETTGV 120
TERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARRASNCRCMWRPQQQKAETTGV
Sbjct: 61 TERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARRASNCRCMWRPQQQKAETTGV 120
Query: 121 ESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAGLAFTYWIS 169
ESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAGLAFTYWIS
Sbjct: 121 ESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAGLAFTYWIS 168
BLAST of Carg28101 vs. NCBI nr
Match:
KAG7012655.1 (Uclacyanin 1 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 194.9 bits (494), Expect = 5.6e-46
Identity = 123/189 (65.08%), Postives = 132/189 (69.84%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTPTNNLAALLTAAFIITTAAPFARAETH VVGG+ VGD
Sbjct: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAM-LSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSAR 120
FA VVEL R+ RA +SR +KEYRDG+DIVALNGEGIRY + +
Sbjct: 61 WFAYSVAHGNVVEL--ERKEEYRACDVSRFIKEYRDGIDIVALNGEGIRYFASSRAERCK 120
Query: 121 RASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLA 169
+ + QQQKAETTGV SRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLA
Sbjct: 121 KGLKLQVHVEAQQQKAETTGVGSRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLA 180
BLAST of Carg28101 vs. NCBI nr
Match:
KAG6573549.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 118/188 (62.77%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTPTNNLAALLTAAFIITTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTPTNNLAALLTAAFIITTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + ++
Sbjct: 61 WFAYSVAHGNVVELER-KEEYKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCKK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQKAETTGV SRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKAETTGVGSRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 180
BLAST of Carg28101 vs. NCBI nr
Match:
XP_022931815.1 (cucumber peeling cupredoxin-like [Cucurbita moschata] >XP_022931816.1 cucumber peeling cupredoxin-like [Cucurbita moschata])
HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44
Identity = 117/188 (62.23%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTPTNNLAA+LTAAFIITTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTPTNNLAAVLTAAFIITTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + ++
Sbjct: 61 WFAYSVAHGNVVELER-KEEYKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCKK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQKAETTGV SRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKAETTGVGSRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 180
BLAST of Carg28101 vs. NCBI nr
Match:
XP_023542417.1 (cucumber peeling cupredoxin-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 187.6 bits (475), Expect = 8.9e-44
Identity = 115/188 (61.17%), Postives = 129/188 (68.62%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTPTNNLAALLTAAFI+TTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTPTNNLAALLTAAFIVTTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + ++
Sbjct: 61 WFAYSVAHGNVVELAR-KEEYKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCKK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQK ETTGV SR+DMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKGETTGVGSRNDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 180
BLAST of Carg28101 vs. ExPASy TrEMBL
Match:
A0A6J1F0H5 (cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111438108 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 117/188 (62.23%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTPTNNLAA+LTAAFIITTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTPTNNLAAVLTAAFIITTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + ++
Sbjct: 61 WFAYSVAHGNVVELER-KEEYKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCKK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQKAETTGV SRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKAETTGVGSRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 180
BLAST of Carg28101 vs. ExPASy TrEMBL
Match:
A0A6J1ICE5 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111472427 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 114/188 (60.64%), Postives = 128/188 (68.09%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTP NNLAALLTAAFI+TTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTP-NNLAALLTAAFIVTTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + R+
Sbjct: 61 WFAYSVAHGNVVELER-KEEFKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCRK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQKA TTGV SR+DMSEGDGESAAVPPSPSTSSTPFAISY+TLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKAGTTGVGSRNDMSEGDGESAAVPPSPSTSSTPFAISYLTLSLLLAG 180
BLAST of Carg28101 vs. ExPASy TrEMBL
Match:
A0A6J1IFV5 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111472426 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41
Identity = 114/188 (60.64%), Postives = 127/188 (67.55%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
MPTP NNLAALLTAAFI+TTAAPFA AETH VVGG+ VGD
Sbjct: 1 MPTP-NNLAALLTAAFIVTTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA VVEL + + + +SR ++EYRDG+DIVALNGEGIRY + R+
Sbjct: 61 WFAYSVAHGNVVELER-KEEFKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCRK 120
Query: 121 ASNCRCMWRPQQQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFAISYVTLSLLLAG 169
+ QQQKA TTGV SRDDMSEG GESAAVPPSPSTSSTPFAISY+TLSLLLAG
Sbjct: 121 GLKLQVHVEAQQQKAGTTGVGSRDDMSEGGGESAAVPPSPSTSSTPFAISYLTLSLLLAG 180
BLAST of Carg28101 vs. ExPASy TrEMBL
Match:
A0A6J1CNA9 (mavicyanin-like OS=Momordica charantia OX=3673 GN=LOC111012673 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.3e-16
Identity = 80/184 (43.48%), Postives = 99/184 (53.80%), Query Frame = 0
Query: 8 LAALLTAAFIITTAA-PFARAETHQVVGGE-------------------VGDGT-FAVLC 67
L A+LTAAF + +A P A AETH VVGG+ VGD FA
Sbjct: 7 LLAVLTAAFFVNSATPPGAGAETHHVVGGDRGWDVDSDISSWSAGRSFRVGDKIWFAYSA 66
Query: 68 GTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARRASNCRC 127
VVEL + + E +S + Y DG+DIVALNGEGIRY +EQ S ++
Sbjct: 67 AHGNVVEL-RSQEEYEACDVSNFTRMYTDGIDIVALNGEGIRYFASSEQESCKKGLKLHV 126
Query: 128 MWRPQ-QQKAETTGVESRDDMSEGDGESAAVPPSPSTSSTPFA-ISYVTLSLLLAGLAFT 169
+ Q QQ +ETT E +D+S D SAA P +PSTSS P ISY+TL+L L L T
Sbjct: 127 QVQAQAQQNSETTEDERTNDVSVAD--SAAAPSTPSTSSPPHTPISYITLTLFLFMLGLT 186
BLAST of Carg28101 vs. ExPASy TrEMBL
Match:
A0A6J1KN85 (uclacyanin 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495690 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 5.5e-15
Identity = 76/197 (38.58%), Postives = 103/197 (52.28%), Query Frame = 0
Query: 1 MPTPTNNLAALLTAAFIITTAAPFARAETHQVVGGE-------------------VGDGT 60
M L A+ TAAF+ TT A A+TH +VGG+ VGD
Sbjct: 1 MAAAMKKLVAVFTAAFVATTV---AGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKI 60
Query: 61 -FAVLCGTRYVVELGKGRRNTERAMLSRSVKEYRDGMDIVALNGEGIRYSRVAEQRSARR 120
FA +VEL + ++ E +S ++ Y DG+DIV LNGEGIRY ++Q S ++
Sbjct: 61 WFAYSMAQGKIVEL-QSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKK 120
Query: 121 ASNCRCMWRPQ-------QQKAE--TTGVESRDDMSEGDGESAAVPPSPSTSSTPF-AIS 168
Q QQKA+ TTGVE+ +D+S DG+SAA PP+PS SS P A+S
Sbjct: 121 GLKLHVQVEAQAQNQDQTQQKAQMKTTGVETTNDVS--DGDSAAAPPTPSASSPPLTAMS 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7012659.1 | 1.8e-84 | 100.00 | hypothetical protein SDJN02_25412, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG7012655.1 | 5.6e-46 | 65.08 | Uclacyanin 1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6573549.1 | 1.1e-44 | 62.77 | Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022931815.1 | 2.3e-44 | 62.23 | cucumber peeling cupredoxin-like [Cucurbita moschata] >XP_022931816.1 cucumber p... | [more] |
XP_023542417.1 | 8.9e-44 | 61.17 | cucumber peeling cupredoxin-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1F0H5 | 1.1e-44 | 62.23 | cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111438108 P... | [more] |
A0A6J1ICE5 | 1.2e-41 | 60.64 | cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111472427 PE=... | [more] |
A0A6J1IFV5 | 2.0e-41 | 60.64 | cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111472426 PE=... | [more] |
A0A6J1CNA9 | 1.3e-16 | 43.48 | mavicyanin-like OS=Momordica charantia OX=3673 GN=LOC111012673 PE=4 SV=1 | [more] |
A0A6J1KN85 | 5.5e-15 | 38.58 | uclacyanin 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495690 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |