Carg28092 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28092
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
LocationCarg_Chr15: 613383 .. 616305 (-)
RNA-Seq ExpressionCarg28092
SyntenyCarg28092
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTACACTCTTTTCGCTCCATGATGTTGTCCAAAGTCGATTGCAATTCAAATTGATGAGGTATCTGTATACTACTTTTTATTGGAGGGGGCGAAACAGGGAGCTTGCAAAGCATCAATCGTTAGAGCGCTACTTGTTTTCGATTCATAGCAAACAACAACAAAAAAGGTATAGTTGCGGCCGATATCTAAGTTCAGACAAAGTTGTTTTTGTTTGTATTTATTACTTCTGTTTTATTCTTGCACATGTTGCAAACTAAACTTTCCTTCTCTTGCTTTCCAGGGATGAGCTGAAGCAAATTGTTACATGGATCTCAGCACAGTTGTTGGAGTTGAAGGGGAGCCCACTTTTGTCAAGTACACAAACTTCCATTACATCGTATAACTCCTGATAGATTTTGATTAAAATAAATGTGGAAGAACTTTCACGTGTGTTCACACTTTCTTTTGGCACGTATAACGTACACATGACAGCCCATTTCTACTGGAGGAAGCATTTCCTTATATGCGCGTAACTAATGATCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACTACAAGGCTCCAGAATTTGCAGAATTATTCTTGTGTTTGAGTGTTCTGATTAGAATTAGAACTACTAGATTTGAGGTTGTTAAATAACTGTTATTCTGATAATTAAAACTCTAAGAGTGATTCGTTTTTTAAAATTTATTTTCAGCGCATCCTCTATTATGTGGATTTGATTATTTGTTTGATTAGCAATGTCTAACACAAGGCATGGTACTGTTGATATGAGGTGGAATAATACTAATATGAAGTTTTATTATTATCTTTTCTAGCAGAGAAGCAAAGGAAGACTCAAATTTTAGAATATCCTTTTTCATATTAATTTTTAAATAATTACTAGTTAAAAAAATTTAGCTAGGTTTCTCTGATAAGCTTGTAAGTTAAGGTTAATATAATCATCAAACTTTCTTTCTTAAATCATATTATACCATTAACTTTTTTTGTCATCCTCATATCCGTTTTTTCGTTTTTAGGTTTACATTACTTACATCTAGCTTCGTACATATTTGTTCAAATCCTATGACGTGATGTGATGGGCGTATTCTTACTGTTTTTTTACATTCAATTTTCCTATCCCCGAGTAATATGCACTATTTCATTTCTAAATCTTGCATACTTTTAGTTTCTTGTGAGTGTGGATTTTCAACCTTATGAATCACGTACCTTGTAGGTAACCACAGGGATGGTTTGTCTTGTTGGAAAATCTATAGCCTCCGGATGCAAGCTGCTGATCTTGTCATTTCTTATCTGGAGTCTTCTACTGATCTGCCGTGTGCTGAACAACGAGAGTTGAAAAAATGAAGTACATCCTTGTTACATAGTGAGTGATTTTACCCTTTTTCTCCTGGCGCATTACATTTTTCAAGAGCCGAAGGGATGCATGATTCGAATTTACTTTCCCACGGTAGCCTGTGCCGCTTTTTTTGGGTGGATTAGGGTAAATTTTGAGGTTTGACAGTGTCATTAATTAAAACAAACTAAAAGCGGAATTTTATATTTAATAAAATGTTTGAACTTTCAAAGCTTGTATCTTTAAATTTTTAAAAGATTTGAATGTTCAAAAACTAATTTTGTAATATAATCTGTTATAATGGTTGTGCTTGCAGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAGTAATTTTTCTGTCAAAGTAATTTTTTGATCATTGCTTTTAGTAGTTGTATGACTTATAACATCAACTTCCCCAAGTTGCTATGAAAATACATCATCTGGACTGGAATGCTGTATTGTAATTTTCGTATTCTGCACAGAGAAAAATAAAATTACTATATGTTTGTCCTCCAATGACCAATCCAACCTACGAAGTTATTTTTATACGAACACGACTCTCCATAATGATACGATACTGTCCACTTTGAGCACAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCTTCATGCCAATGGAGAGAGTATTCCTTGATTATAAACCCATGATCATTTCCTAAATTAGTCGATGTGAGACTTTTATCATCCAACCGTTATAAATATTGAACTTCGGAACTCTGGTAACTACACGCACTTCATCTTTTTCTGGTACTCGACGGGCATGTTCTTGAAACTACTGTCGCTTGCGTGCTTAAGCAGCAGACGCACAACCAGGTATCTTTTTTGTAAAAAGAAAGTAGTGTGTTTTATTGTGGCCACGTTAAGTGTGGATCCACCCTTCCGTCGTTGGATCCTAGTTACCCAACCAACCAAGTAATTGGATACTCCACTTCTGTCGTTGGATCCTACTTACGGATCTACTTCTAGATTTTTTCCTAGATTTACCTGGTCTTCTATAGCCAGCCATTTTTGTTACACACGAGTATATAGTTCTTATATAGTTGAATCCAAACCTCATCCTACGAATTTTAATACTTGTCTAAGAACGACTGAAGCTTTGATTCAGATATTTCCGTTCTCGTCTGTTTGCGTTGGATCTTTACTTGGCTCCCTGTCGTTTATATCAATGCACAATTGCAGACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGTATTTTCATGATCTCTTTTCTTTACTTTGATTTTTTAACGATCGGATAATTAAGCATCTGATTTTTTTTAACAATCTGACAATTAAGCATTTGGCTTACTCATTCATTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAG

mRNA sequence

GGTACACTCTTTTCGCTCCATGATGTTGTCCAAAGTCGATTGCAATTCAAATTGATGAGGGATGAGCTGAAGCAAATTGTTACATGGATCTCAGCACAGTTGTTGGAGTTGAAGGGGAGCCCACTTTTGTCAAGTAACCACAGGGATGGTTTGTCTTGTTGGAAAATCTATAGCCTCCGGATGCAAGCTGCTGATCTTGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAG

Coding sequence (CDS)

GGTACACTCTTTTCGCTCCATGATGTTGTCCAAAGTCGATTGCAATTCAAATTGATGAGGGATGAGCTGAAGCAAATTGTTACATGGATCTCAGCACAGTTGTTGGAGTTGAAGGGGAGCCCACTTTTGTCAAGTAACCACAGGGATGGTTTGTCTTGTTGGAAAATCTATAGCCTCCGGATGCAAGCTGCTGATCTTGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAG

Protein sequence

GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Homology
[Close]
BLAST of Carg28092 vs. NCBI nr
Match: KAG7015971.1 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.9 bits (834), Expect = 1.9e-85
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLR 60
           GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLR
Sbjct: 1   GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLR 60

Query: 61  MQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFG 120
           MQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFG
Sbjct: 61  MQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFG 120

Query: 121 TRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 156
           TRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Sbjct: 121 TRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 155

[Close]
BLAST of Carg28092 vs. NCBI nr
Match: KAG6578399.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6578405.1 Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 101/147 (68.71%), Postives = 104/147 (70.75%), Query Frame = 0 

Query: 44  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GL 103
           + NHRDGLS  K  +   +AADL                                   GL
Sbjct: 207 AGNHRDGLSVGKSIASGCKAADLVISYLESSTDLPAEGMHDSNLLSHGSLCRFFGWIRGL 266

Query: 104 SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP 156
           SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP
Sbjct: 267 SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP 326

[Close]
BLAST of Carg28092 vs. NCBI nr
Match: KAG6578391.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 101/147 (68.71%), Postives = 104/147 (70.75%), Query Frame = 0 

Query: 44  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GL 103
           + NHRDGLS  K  +   +AADL                                   GL
Sbjct: 313 AGNHRDGLSVGKSIASGCKAADLVISYLESSTDLPAEGMHDSNLLSHGSLCRFFGWIRGL 372

Query: 104 SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP 156
           SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP
Sbjct: 373 SNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIP 432

[Close]
BLAST of Carg28092 vs. NCBI nr
Match: XP_023551048.1 (glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 6.7e-46
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 0 

Query: 59  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV 118
           +++    +GLSNCWKNQ PASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV
Sbjct: 1   MKVHPCYIGLSNCWKNQHPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV 60

Query: 119 FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 156
           FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Sbjct: 61  FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 97

[Close]
BLAST of Carg28092 vs. NCBI nr
Match: XP_023551041.1 (glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551042.1 glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551043.1 glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551044.1 glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 6.7e-46
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 0 

Query: 59  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV 118
           +++    +GLSNCWKNQ PASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV
Sbjct: 1   MKVHPCYIGLSNCWKNQHPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAV 60

Query: 119 FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 156
           FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Sbjct: 61  FGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE 97

[Close]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match: P34921 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus OX=3570 GN=GAPC PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-33
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWG  GA+YVVESTGV
Sbjct: 44  TYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGV 103

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 104 FTDKDKAAAHLK 115

[Close]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match: P26520 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida OX=4102 GN=GAPC PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 79  SIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVV 138
           S+   TYMFKYD VHGQWKHH++K KD KTLLFGEK V VFG RNPEEIPWGEAGA+YVV
Sbjct: 39  SVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVV 98

Query: 139 ESTGVFTDKDKAAAHLE 156
           ESTGVFTDKDKAAAHL+
Sbjct: 99  ESTGVFTDKDKAAAHLK 115

[Close]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match: P26518 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora OX=3403 GN=GAPC PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-32
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPEEIPWGE GAE+VVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGV 105

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 106 FTDKDKAAAHLK 117

[Close]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match: Q7FAH2 (Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=GAPC2 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.4e-32
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPEEIPWGE GAE+VVESTGV
Sbjct: 44  TYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGV 103

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 104 FTDKDKAAAHLK 115

[Close]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match: Q9FX54 (Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic OS=Arabidopsis thaliana OX=3702 GN=GAPC2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-32
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGV 105

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 106 FTDKDKAAAHLK 117

[Close]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match: A0A6J1FJL0 (glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like OS=Cucurbita moschata OX=3662 GN=LOC111444834 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 86  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFT 145
           MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFT
Sbjct: 1   MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFT 60

Query: 146 DKDKAAAHLE 156
           DKDKAAAHLE
Sbjct: 61  DKDKAAAHLE 70

[Close]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match: A0A5P9VJ34 (Glyceraldehyde-3-phosphate dehydrogenase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHHDIKVKDGKTLLFGEKAV VFGTRNPEEIPWGEAGAEYVVESTGV
Sbjct: 44  TYMFKYDSVHGQWKHHDIKVKDGKTLLFGEKAVTVFGTRNPEEIPWGEAGAEYVVESTGV 103

Query: 144 FTDKDKAAAHLE 156
           FTD+DKAAAHL+
Sbjct: 104 FTDQDKAAAHLK 115

[Close]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match: A0A6J1JY24 (glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like OS=Cucurbita maxima OX=3661 GN=LOC111488917 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.1e-32
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 86  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFT 145
           MFKYD VHGQWKHHDIKVKDGKTLLFGEKAV VFGTRNPEEIPWGEAGAEYVVESTGVFT
Sbjct: 1   MFKYDSVHGQWKHHDIKVKDGKTLLFGEKAVTVFGTRNPEEIPWGEAGAEYVVESTGVFT 60

Query: 146 DKDKAAAHLE 156
           DKDKAAAHLE
Sbjct: 61  DKDKAAAHLE 70

[Close]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match: E5G6F3 (Glyceraldehyde-3-phosphate dehydrogenase OS=Ananas comosus OX=4615 GN=LOC109723214 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWGEAGAEYVVESTGV
Sbjct: 44  TYMFKYDTVHGQWKHHDIKVKDSKTLLFGEKAVTVFGIRNPEEIPWGEAGAEYVVESTGV 103

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 104 FTDKDKAAAHLK 115

[Close]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match: E7CHF0 (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ananas comosus OX=4615 GN=GAPDH PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWGEAGAEYVVESTGV
Sbjct: 5   TYMFKYDTVHGQWKHHDIKVKDSKTLLFGEKAVTVFGIRNPEEIPWGEAGAEYVVESTGV 64

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 65  FTDKDKAAAHLK 76

[Close]
BLAST of Carg28092 vs. TAIR 10
Match: AT1G13440.1 (glyceraldehyde-3-phosphate dehydrogenase C2 )

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGV 105

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 106 FTDKDKAAAHLK 117

[Close]
BLAST of Carg28092 vs. TAIR 10
Match: AT1G13440.2 (glyceraldehyde-3-phosphate dehydrogenase C2 )

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGV 105

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 106 FTDKDKAAAHLK 117

[Close]
BLAST of Carg28092 vs. TAIR 10
Match: AT3G04120.1 (glyceraldehyde-3-phosphate dehydrogenase C subunit 1 )

HSP 1 Score: 134.4 bits (337), Expect = 7.7e-32
Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 84  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGV 143
           TYMFKYD VHGQWKH+++K+KD KTLLFGEK V VFG RNPE+IPW EAGA+YVVESTGV
Sbjct: 46  TYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGV 105

Query: 144 FTDKDKAAAHLE 156
           FTDKDKAAAHL+
Sbjct: 106 FTDKDKAAAHLK 117

[Close]
BLAST of Carg28092 vs. TAIR 10
Match: AT1G16300.1 (glyceraldehyde-3-phosphate dehydrogenase of plastid 2 )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 0 

Query: 85  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVF 144
           YMFKYD  HG +K   I V D  TL    K V V   R+P EIPW + GAEYVVES+GVF
Sbjct: 126 YMFKYDSTHGNYK-GTINVIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVF 185

Query: 145 TDKDKAAAHLE 156
           T   +A++HL+
Sbjct: 186 TTVGQASSHLK 195

[Close]
BLAST of Carg28092 vs. TAIR 10
Match: AT1G79530.1 (glyceraldehyde-3-phosphate dehydrogenase of plastid 1 )

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 0 

Query: 85  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVF 144
           YM KYD  HG +K   I V D  TL    K V V   R+P EIPW + GA+YVVES+GVF
Sbjct: 128 YMLKYDSTHGNFK-GSINVIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVF 187

Query: 145 TDKDKAAAHLE 156
           T   KAA+HL+
Sbjct: 188 TTLSKAASHLK 197

The following BLAST results are available for this feature:
BLAST of Carg28092 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015971.11.9e-85100.00Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosp... [more]
KAG6578399.11.6e-4768.71Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
KAG6578391.11.6e-4768.71Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023551048.16.7e-4690.72glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X4 [Cucurbita p... [more]
XP_023551041.16.7e-4690.72glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp... [more]
BLAST of Carg28092 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P349218.9e-3388.89Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus OX=... [more]
P265201.2e-3281.82Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida OX=4102 G... [more]
P265182.0e-3286.11Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora OX=34... [more]
Q7FAH23.4e-3286.11Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic OS=Oryza sativa subsp. jap... [more]
Q9FX545.7e-3284.72Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic OS=Arabidopsis thalian... [more]
BLAST of Carg28092 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FJL01.4e-33100.00glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like OS=Cucurbita moschata O... [more]
A0A5P9VJ347.0e-3394.44Glyceraldehyde-3-phosphate dehydrogenase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1[more]
A0A6J1JY242.1e-3297.14glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like OS=Cucurbita maxima OX=... [more]
E5G6F31.0e-3193.06Glyceraldehyde-3-phosphate dehydrogenase OS=Ananas comosus OX=4615 GN=LOC1097232... [more]
E7CHF01.0e-3193.06Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ananas comosus OX=4615 GN... [more]
BLAST of Carg28092 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G13440.14.1e-3384.72glyceraldehyde-3-phosphate dehydrogenase C2 [more]
AT1G13440.24.1e-3384.72glyceraldehyde-3-phosphate dehydrogenase C2 [more]
AT3G04120.17.7e-3281.94glyceraldehyde-3-phosphate dehydrogenase C subunit 1 [more]
AT1G16300.12.5e-1453.52glyceraldehyde-3-phosphate dehydrogenase of plastid 2 [more]
AT1G79530.13.3e-1453.52glyceraldehyde-3-phosphate dehydrogenase of plastid 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainSMARTSM00846gp_dh_n_7coord: 59..155
e-value: 6.6E-7
score: 38.9
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainPFAMPF00044Gp_dh_Ncoord: 83..147
e-value: 5.0E-15
score: 55.7
NoneNo IPR availableGENE3D3.40.50.720coord: 71..155
e-value: 1.3E-25
score: 91.9
NoneNo IPR availablePANTHERPTHR10836:SF116GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASEcoord: 80..154
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPANTHERPTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEcoord: 80..154
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 83..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28092-RACarg28092-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006006 glucose metabolic process
cellular_component GO:0009536 plastid
molecular_function GO:0051287 NAD binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor