Carg28090 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28090
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlyceraldehyde-3-phosphate dehydrogenase, cytosolic
LocationCarg_Chr15: 597282 .. 598752 (-)
RNA-Seq ExpressionCarg28090
SyntenyCarg28090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATTCGAATTTACTTTCCCACGGTAGCCTGTGCCGCTTTTTTGGGTGGATTAGGGTAAATTTTGAGGTTTGACAGTGTCATTAATTAAAACAAACTAAAAGCGAATTTTATATTTAATAAAATGTTTGAACTTTCAAAGCTTGTATCTTTAAATTTTAAAAGATTTGAATGTTCAAAAACTAATTTTGTAATATAATCTGTTATAATGGTTGTGCTTGCAGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAGTAATTTTTCTGTCAAAGTAATTTTTTGATCATTGCTTTTAGTAGTTGTATGACTTATAACATCAACTTCCCCAAGTTGCTATGAAAATACATCATCTGGACTGGAATGCTGTATTGTAATTTTCGTATTCTGCACAGAGAAAAATAAAATTACTATATGTTTGTCCTCCAATGACCAATCCAACCTACGAAGTTATTTTTATACGAACACGACTCTCCATAATGATACGATACTGTCCACTTTGAGCACAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCTTCATGCCAATGGAGAGAGTATTCCTTGATTATAAACCCATGATCATTTCCTAAATTAGTCGATGTGAGACTTTTATCATCCAACCGTTATAAATATTGAACTTCGGAACTCTGGTAACTACACGCACTTCATCTTTTTCTGGTACTCGACGGGCATGTTCTTGAAACTTACTGTCGCTTGCGTGCTTAAGCAGCAGACGCACAACCAGGTATCTTTTTTGTAAAAAGAAAGTAGTGTGTTTTATTGTGGCCACGTTAAGTGTGGCTCCACCCTTCCGTCGTTGGATCCTAGTTACCCAAAACAACAAGTAATTGGATACTCCACTTCTGTCGTTGGATCCTACTTACGGATCTACTTCTAGATTTTTTCTAGATTTACCTGGTCTTCTATAGCCAGCCATTTTTGTTCACACACGAGTATATAGTTCTTATATAGTTGAATCCAAACCTCATCCTACGAATTTTAATACTTGTCTAAGAACGACTGAAGCTTTGATTCAGATATTTCCGTTCTCGTCTGTTTGCGTTGGATCTTTACTTGGCTCCCTGTTCGTTTATATCAATGCACAAATTGCAGACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAGCAGTCGCCGTTTTTGGTACTAGGTATTTTCATGATCTCTTTTCTTTACTTTGATTTTTTAACGATCGGATAATTAAGCATCTGATTTTTTTTAACAAATCTGACAATTAAGCATTTGGCTTACTCATTCATTAGGAACCCGGAGGAGATCCCATGGGAGAGGCCTGGAGCTGAGTATGTGTGTTGAATCCACTGGAGTTTTCACTGATAAGGGACAAAGGCTGCTGCTCATTTGG

mRNA sequence

ATGCATGATTCGAATTTACTTTCCCACGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAGTAATTTTTCTGTCAAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGAGAGGCCTGGAGCTGAGTATGTGTGTTGAATCCACTGGAGTTTTCACTGATAAGGGACAAAGGCTGCTGCTCATTTGG

Coding sequence (CDS)

ATGCATGATTCGAATTTACTTTCCCACGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAGTAATTTTTCTGTCAAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGAGAGGCCTGGAGCTGAGTATGTGTGTTGAATCCACTGGAGTTTTCACTGATAAGGGACAAAGGCTGCTGCTCATTTGG

Protein sequence

MHDSNLLSHGTLKLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLELSMCVESTGVFTDKGQRLLLIW
Homology
[Close]
BLAST of Carg28090 vs. NCBI nr
Match: KAG7015969.1 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MHDSNLLSHGTLKLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDGKTLLF 60
           MHDSNLLSHGTLKLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDGKTLLF
Sbjct: 1   MHDSNLLSHGTLKLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDGKTLLF 60

Query: 61  GEKQSPFLVLGTRRRSHGRGLELSMCVESTGVFTDKGQRLLLIW 105
           GEKQSPFLVLGTRRRSHGRGLELSMCVESTGVFTDKGQRLLLIW
Sbjct: 61  GEKQSPFLVLGTRRRSHGRGLELSMCVESTGVFTDKGQRLLLIW 104

[Close]
BLAST of Carg28090 vs. NCBI nr
Match: KAG6578399.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6578405.1 Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-17
Identity = 59/103 (57.28%), Postives = 65/103 (63.11%), Query Frame = 0 

Query: 1   MHDSNLLSHGTL-----KLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDG 60
           MHDSNLLSHG+L      +   S    + L ++   +TYMFKYDGVHGQWKHHDIKVKDG
Sbjct: 245 MHDSNLLSHGSLCRFFGWIRGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDG 304

Query: 61  KTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVESTGVFTDK 97
           KTLLFGEK     V GTR        E      VESTGVFTDK
Sbjct: 305 KTLLFGEK--AVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDK 345

[Close]
BLAST of Carg28090 vs. NCBI nr
Match: KAG6578391.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-17
Identity = 59/103 (57.28%), Postives = 65/103 (63.11%), Query Frame = 0 

Query: 1   MHDSNLLSHGTL-----KLLEESASSIHYLSSNFSVKTYMFKYDGVHGQWKHHDIKVKDG 60
           MHDSNLLSHG+L      +   S    + L ++   +TYMFKYDGVHGQWKHHDIKVKDG
Sbjct: 351 MHDSNLLSHGSLCRFFGWIRGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDG 410

Query: 61  KTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVESTGVFTDK 97
           KTLLFGEK     V GTR        E      VESTGVFTDK
Sbjct: 411 KTLLFGEK--AVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDK 451

[Close]
BLAST of Carg28090 vs. NCBI nr
Match: KAG7015971.1 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13
Identity = 47/74 (63.51%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 25  LSSNFSVKTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE-- 84
           L ++   +TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEK     V GTR        E  
Sbjct: 76  LPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEK--AVAVFGTRNPEEIPWGEAG 135

Query: 85  LSMCVESTGVFTDK 97
               VESTGVFTDK
Sbjct: 136 AEYVVESTGVFTDK 147

[Close]
BLAST of Carg28090 vs. NCBI nr
Match: XP_023551048.1 (glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13
Identity = 46/67 (68.66%), Postives = 47/67 (70.15%), Query Frame = 0 

Query: 32 KTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVES 91
          +TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEK     V GTR        E      VES
Sbjct: 25 QTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEK--AVAVFGTRNPEEIPWGEAGAEYVVES 84

Query: 92 TGVFTDK 97
          TGVFTDK
Sbjct: 85 TGVFTDK 89

[Close]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match: P34921 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus OX=3570 GN=GAPC PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.5e-15
Identity = 43/66 (65.15%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSH--GRGLELSMCVEST 92
           TYMFKYD VHGQWKHHDIKVKD KTLLFGEK     V G R        G      VEST
Sbjct: 44  TYMFKYDSVHGQWKHHDIKVKDEKTLLFGEK--AVTVFGNRNPEEIPWGGTGADYVVEST 103

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 104 GVFTDK 107

[Close]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match: P26518 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora OX=3403 GN=GAPC PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-14
Identity = 42/66 (63.64%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDSKTLLFGEK--PVTVFGVRNPEEIPWGETGAEFVVEST 105

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 106 GVFTDK 109

[Close]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match: Q9FX54 (Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic OS=Arabidopsis thaliana OX=3702 GN=GAPC2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-14
Identity = 42/66 (63.64%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGIRNPEDIPWGEAGADFVVEST 105

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 106 GVFTDK 109

[Close]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match: P25861 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus OX=4151 GN=GAPC PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.2e-14
Identity = 43/70 (61.43%), Postives = 46/70 (65.71%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTR------RRSHGRGLELSMC 92
           TYMFKYD VHG WKHH++KVKD KTLLFGEK  P +V G R      R S G        
Sbjct: 44  TYMFKYDSVHGAWKHHELKVKDEKTLLFGEK--PVVVFGRRNPEEIPRASTG----AEYI 103

Query: 93  VESTGVFTDK 97
           VESTGVFTDK
Sbjct: 104 VESTGVFTDK 107

[Close]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match: P08477 (Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic (Fragment) OS=Hordeum vulgare OX=4513 GN=GAPC PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.1e-14
Identity = 42/68 (61.76%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 33 TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSH----GRGLELSMCVE 92
          TYMFKYD VHGQWKHH++KVKD KTLLFGEK+    V G R          G E    VE
Sbjct: 12 TYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKE--VAVFGCRNPEEIPWAAAGAE--YVVE 71

Query: 93 STGVFTDK 97
          STGVFTDK
Sbjct: 72 STGVFTDK 75

[Close]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match: A0A7J8R2K7 (Gp_dh_N domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_019851 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13
Identity = 43/66 (65.15%), Postives = 46/66 (69.70%), Query Frame = 0 

Query: 35 MFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTR--RRSHGRGLELSMCVESTGV 94
          MFKYDGVHGQWKHHD+KVKD KTLLFGEK  P +  G R  +       E    VESTGV
Sbjct: 1  MFKYDGVHGQWKHHDVKVKDSKTLLFGEK--PVIGFGIRNPKEIPWSETEDEFVVESTGV 60

Query: 95 FTDKGQ 99
          FTDKGQ
Sbjct: 61 FTDKGQ 64

[Close]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match: A0A5J5BIS2 (Glyceraldehyde-3-phosphate dehydrogenase OS=Nyssa sinensis OX=561372 GN=F0562_023312 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.1e-13
Identity = 43/66 (65.15%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHHD+KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 44  TYMFKYDSVHGQWKHHDVKVKDDKTLLFGEK--PVTVFGVRNPEEIPWAETGAEFVVEST 103

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 104 GVFTDK 107

[Close]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match: A0A1U8HRN9 (glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107886514 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.3e-13
Identity = 43/66 (65.15%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33 TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
          TYMFKYD VHGQWKHHD+KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 2  TYMFKYDSVHGQWKHHDLKVKDSKTLLFGEK--PVTVFGIRNPEEIPWAEAGAEFVVEST 61

Query: 93 GVFTDK 97
          GVFTDK
Sbjct: 62 GVFTDK 65

[Close]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match: A0A5D2RAQ4 (Gp_dh_N domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G156200v1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.3e-13
Identity = 43/66 (65.15%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHHD+KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 47  TYMFKYDSVHGQWKHHDLKVKDSKTLLFGEK--PVTVFGIRNPEEIPWAEAGAEFVVEST 106

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 107 GVFTDK 110

[Close]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match: A0A5D2RAB8 (Glyceraldehyde-3-phosphate dehydrogenase OS=Gossypium tomentosum OX=34277 GN=ES332_A03G156300v1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.3e-13
Identity = 43/66 (65.15%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHHD+KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 47  TYMFKYDSVHGQWKHHDLKVKDSKTLLFGEK--PVTVFGIRNPEEIPWAEAGAEFVVEST 106

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 107 GVFTDK 110

[Close]
BLAST of Carg28090 vs. TAIR 10
Match: AT1G13440.1 (glyceraldehyde-3-phosphate dehydrogenase C2 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 42/66 (63.64%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGIRNPEDIPWGEAGADFVVEST 105

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 106 GVFTDK 109

[Close]
BLAST of Carg28090 vs. TAIR 10
Match: AT1G13440.2 (glyceraldehyde-3-phosphate dehydrogenase C2 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 42/66 (63.64%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKHH++KVKD KTLLFGEK  P  V G R        E      VEST
Sbjct: 46  TYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGIRNPEDIPWGEAGADFVVEST 105

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 106 GVFTDK 109

[Close]
BLAST of Carg28090 vs. TAIR 10
Match: AT3G04120.1 (glyceraldehyde-3-phosphate dehydrogenase C subunit 1 )

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-14
Identity = 40/66 (60.61%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 33  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKQSPFLVLGTRRRSHGRGLE--LSMCVEST 92
           TYMFKYD VHGQWKH+++K+KD KTLLFGEK  P  V G R        E      VEST
Sbjct: 46  TYMFKYDSVHGQWKHNELKIKDEKTLLFGEK--PVTVFGIRNPEDIPWAEAGADYVVEST 105

Query: 93  GVFTDK 97
           GVFTDK
Sbjct: 106 GVFTDK 109

The following BLAST results are available for this feature:
BLAST of Carg28090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015969.11.1e-52100.00Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosp... [more]
KAG6578399.17.5e-1757.28Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
KAG6578391.17.5e-1757.28Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7015971.11.0e-1363.51Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosp... [more]
XP_023551048.11.7e-1368.66glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X4 [Cucurbita p... [more]
BLAST of Carg28090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P349219.5e-1565.15Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus OX=... [more]
P265181.2e-1463.64Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora OX=34... [more]
Q9FX542.8e-1463.64Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic OS=Arabidopsis thalian... [more]
P258616.2e-1461.43Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus OX=4151... [more]
P084778.1e-1461.76Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic (Fragment) OS=Hordeum vulg... [more]
BLAST of Carg28090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J8R2K74.2e-1365.15Gp_dh_N domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_0198... [more]
A0A5J5BIS27.1e-1365.15Glyceraldehyde-3-phosphate dehydrogenase OS=Nyssa sinensis OX=561372 GN=F0562_02... [more]
A0A1U8HRN99.3e-1365.15glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X2 OS=Gossypium... [more]
A0A5D2RAQ49.3e-1365.15Gp_dh_N domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G... [more]
A0A5D2RAB89.3e-1365.15Glyceraldehyde-3-phosphate dehydrogenase OS=Gossypium tomentosum OX=34277 GN=ES3... [more]
BLAST of Carg28090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G13440.12.0e-1563.64glyceraldehyde-3-phosphate dehydrogenase C2 [more]
AT1G13440.22.0e-1563.64glyceraldehyde-3-phosphate dehydrogenase C2 [more]
AT3G04120.11.3e-1460.61glyceraldehyde-3-phosphate dehydrogenase C subunit 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 13..101
e-value: 3.6E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR10836:SF116GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASEcoord: 31..97
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPANTHERPTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEcoord: 31..97
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 28..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28090-RACarg28090-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0044281 small molecule metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor