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Carg28081 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGTAAATTTTCGATTCCTCTTCTGTTTGTAACTTTATGTTTAAGGATCTGTTGAACGATTTCATTTTTGCTCTGTTCTCGTTCTTTCCGTATGATCAACTGCCTTGGAACTCGTTTTCTTGATTCCAATCCTTTTTATCTCGATTTTTGCGTTGATTAGTGTCGTTAATTACGAAGTTTGAAGCATTGGTTTGAATCGGTGCTGTGGTTGTATTGCATGGCTGTGAAATGCATGGATGATGGACTTGGCGTTCCCTCTTTTGTTTCAGAATGTTTGATATCTATTTATTTTCGTGTTTTACATTCATTTGTGTTATTTCAATACTGATTTGAATTTCTTACCTAATTTTTCCGGCTATTTGGAACCTGTATGCTGAAGGGAATCGTTCTGAACCATGTTCAGAGAAATTGCATTTTCTGTTAGAAAATTGAGTCCAGCTGACCTTAATTCTCTCTCGTTATTTGTGTCCTCAAAAATTTGAAGCGCAAAAGAAAACCATTAGTTATAAGCTGATCTTGAAATCCTTGCATGTATTCTGTTTACGGCTCTAGTTATGAGTCAACTTGAAGTCATTATGTCCTGAAAATTCTGTGTGCGTGTAATAATTATAATTCTTCTATTGTTCTTTTTGAACTCTCTCTGTTAAGAACTTGTGTTATACTATCAATATTCTCTGCTGATCATTTTGGTGATAATCATGTTGTTTCTTGGTAAGCAGGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGTAAGTCTATACTTCTTTTTGCTGAGGCTATCAGTGCAAACGCAAATTGCTGTTGTTCTATGATGTTAACTGTTTGGAACAGGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTAAACTCATACAATACCTTGCTCACCATGTTTCATAGAAGTTTTCCTTTGAACATCTTTACCATAATTAATTTGAAACTTTTTGAAATTCTAATTAAGACCCTCGATTAATTTGATTATGGGATATCTTATGGGATCATCTCCAACGTATCTGTTCTTGTCTTCTTGCTTGTGAGCGTTCTTGGTAAAACACGACTGCCATTTTTAACATTTGGGAATATATGTATGAATAGCTGTTCTTGAAGTTGGTTTTTTCTTCCATTAATTTATTTTTACATATAACCCATATTAAAAAAAAAGGATTGATTGTCATTTTACTTATGAATACTGATTTTTCTACCATCGTCATGTGTTGTCCTAATGATTAACAAAAACAAATGAACTTAGGGAATGGATTTAAGCCATAGTGACTAATTACCTAAAACTTCTTTTTCATCTCTATCTTTGAGAAAAGAAAGATTCTCCCTTTTGTGATTCTTATTCTTTTGTTCTTCCCTTCATTAAAAAAATGCCCATGAATTGATTATTGTTTCATATACTCAATTTTCCATGAAAAATAATTTAGGACAAGTAAAATCATGAAAATTTTAGTTCAAGCTAGATCTTAAATGTGATGTCCTACATTGGTTGCGGAGGAGAACAAAACACCCTTTATATGGATGTGGAAACATTCCCCAAGTAGACGCGTTTTAAAGCCTTGATGGGAAGCCGTTGCTAGCGGTGGATCTAGGCCGTTACATTAAAGTTTTGAATACTGTATTTGACATGCAATACAATGTAACATATATGTGTATATATGTGAGATTCAGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGTTAAAAATCTCATTGCCACGAGGGAGGGAGGGTGAGCAAAAAACTCAGTCTCCTTTTTTCTCCCAAGTCTTCTCTTTTTTGTCTAGATTTTAACGCTAATCAATGTATTAGGTCTTAAAATAATGATAATAATAAATTCACTAGACTTTGTTTCCTGATCTTCTCTTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTCTTTTGTTATCTATCGCAGGGTCGTAGCTAGCTTTCGCGCGACGCCGAAACGCTAGCTTTCGCGCGAAATTTTCC ATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGGTCGTAGCTAGCTTTCGCGCGACGCCGAAACGCTAGCTTTCGCGCGAAATTTTCC ATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGGTCGTAG MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTEEFGISVEEESAQSITTVQEAADMIEDLIFKKSGS Homology
BLAST of Carg28081 vs. NCBI nr
Match: KAG7021169.1 (Acyl carrier protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg28081 vs. NCBI nr
Match: XP_022937990.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 228.0 bits (580), Expect = 4.7e-56 Identity = 131/139 (94.24%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of Carg28081 vs. NCBI nr
Match: KAG6586285.1 (Coiled-coil domain-containing protein SCD2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55 Identity = 130/138 (94.20%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of Carg28081 vs. NCBI nr
Match: XP_023537926.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.8 bits (569), Expect = 8.8e-55 Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Carg28081 vs. NCBI nr
Match: XP_022965998.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 128/139 (92.09%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26 Identity = 81/141 (57.45%), Postives = 101/141 (71.63%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-26 Identity = 81/138 (58.70%), Postives = 96/138 (69.57%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.8e-24 Identity = 82/142 (57.75%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-24 Identity = 81/141 (57.45%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 75/139 (53.96%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy TrEMBL
Match: A0A6J1FID7 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111444211 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.3e-56 Identity = 131/139 (94.24%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy TrEMBL
Match: A0A6J1HQL1 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111465717 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.3e-55 Identity = 128/139 (92.09%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy TrEMBL
Match: A0A6J1G2R0 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111450263 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.3e-47 Identity = 114/140 (81.43%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy TrEMBL
Match: A0A6J1KDG5 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111493903 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46 Identity = 113/140 (80.71%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Carg28081 vs. ExPASy TrEMBL
Match: A0A0A0LG91 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45 Identity = 112/137 (81.75%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of Carg28081 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 ) HSP 1 Score: 104.0 bits (258), Expect = 9.5e-23 Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 0
BLAST of Carg28081 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 ) HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21 Identity = 74/149 (49.66%), Postives = 93/149 (62.42%), Query Frame = 0
BLAST of Carg28081 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 ) HSP 1 Score: 92.0 bits (227), Expect = 3.7e-19 Identity = 62/139 (44.60%), Postives = 89/139 (64.03%), Query Frame = 0
BLAST of Carg28081 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 ) HSP 1 Score: 89.0 bits (219), Expect = 3.2e-18 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 0
BLAST of Carg28081 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 ) HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17 Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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