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Carg27984 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCGTCCCTCTCTGCAAGATAAGTGTGGATGTGGCCAACGGAAATCTGTTACTAATTCCATATAACAATGCTTTACTTCACCAATAGATAAGGGTTCTTGTGAAGAAGCGTGGTTTTTGAAGATGGCTTCCACTGCGCTGATTCTCCCCATCCATGGAGGAAACCTCTCTTTCCGCCATACCCACCCTTCTGCAACATTTTCCAGGTAATTTCAGCTTCTTCCTCGAATACCTGTTTATCTCATGCGATTCTATTAGTATAATCGGATGTTCTAAGAGATTAAGAGATGATTGACTGTTTTCTTGCGCCGATCGGCGGTGTATCTCCTTGTTTTTCTTTTTTATTAGGTTTGAATTTCTTTGTTGAATTGGGGCTTTGTGTCTAGACTTCGTATGTTGTAGATGGCTTCTGTAAAACTTTACAAGCTACAGAGTGATAAATAAAAGCTTCTAGTTCCTTCCTTTGGGTTGATTAGAGTTGGAACTGCTCGTAGATGATAAGCGCCAAGATTTTGCAAAGCTAGAGGTTCTTCTAAGATCCTTGCAAAATTTCACAAATAAAGCTAACTTAACTAATGATTCCAACCAATAGCAGGTTGGAAGGATGAATAACTCTTAGATCGAACTTGGAATCTATGATGGTCACTCTTAGATTCCAAGATGATTCACTCCAGAAGTAGCTTCATTCGACTAATCCAATGAATTGATTTTACTTTGAGAAAGAAACATCAGTTTTTGTATTCCACCATGATTTCAATCTTGAATATTACATGCCTTTAAATAGGCAAAAAAAAAAAAAGAATCCAAATATAATGGTAATTTAGTCTTAATTGGTAGTGATATTTAAACCCACTCCATTGTTTTCTTGATTTGATACTTAAATCTTTTTTACCTTGCTTCGTGTAATTGCTCCTTCGAGTAATTAGTGGTTAGATTCATATCAGTAGATGTCTTACAATTGGTGTGTATCACGTTCTGGATATTAGTTAAGACAATTAGATTTGGCTCGTTCTGATTTAGGTCATTATGCTGTGAGAAGTTTGGTGCGTACTTTCATGAGTTAGCGACCTGGACTAATGCTTAAGCTTCTTGAATATCTGGTATTCTCTCTCTATATATGTCTGGTTGTGAAGTTTTCTGTTTAATAACCGGGTGATGGAGCTTCACTCCTTGCCATGAAAACTTGCTCCGGCCAAAAACAATGGTTTTGAGTTCTTAAGTAAGTTTTAGCCATAGGGATGCAAATCCAAAACCTTGGAGGGTATGTCTAAATAGGGAAAATTTTTGGTACTACGGGAATATGGATACTCATGTTTGAAACATGCTTACTTGTTATGACGTTTTCCATTCAATTTTGATCTCATTGAATTGAGTTCATATAGGATCAAATACTAGTCACCAAGAAGCATATATAAAAGAACTAAATTAGTGTTAAAAACCATCATAGCTAGCTTGGTGGTCTTCTGTTGTGGTTCTTCACAGCTCTGTCTTACTGTAACCCTTTCTTTATTCATTTACTTCGTGCTCCTCCTTTTTTTCTTTGTATATTTGTAACAGTCCAACCCCATCGCTAGTAGATATTGTCCTATTTGGACTTTCCTTTTCGAGCTTCCCCTCAAGGTTTTTAAAATGCGTCTGTTAGGGATTCGAGCTTCCCCTCAAGGTTTTTAAAATGCGTCTGATAGAGAGAGGTTTCCACGCACTCATAAGAAATGCTTCGTTCTCCTCTCCCACCGACGTGGGGATCTCAAAATTCACCCCAGTGTCCTCATTGACACACTACTAGGTGTCTAGCTCTGATACCATTTGTAACAGCCAAAACCCATCGATAGCAGATGTTGTCTTTTTTGGGTTTTCCCTTCAGAGGTTTCCACACCCATATAAGGAATGTTTTGTTCTCCTCTCTAATCAACATGGGATCTCACAATATTCTTTCTGTAAAAGGATCCCTTTTGTTCTCTAGCCGGTGGTTATAAATATAAAGCATATTGATGAAGGCTCCAGAATTTCGAGCTGAACTCACACAAGTCCTACACTATTCTTGGTGAAAAAGATGAGGGACTTTCCTTAAATTTTTTCTTATAGCTAAGACCTATATAGGCAATGAAATGAGTTCTAAACTACTGTCTCATTTACTTTTGAGCCACGTCTCCAAAAATATGCCTATTAATATTTACTAGATGTTCCAAATTATAGCCTTAAAGCTGAATTTATATATTTTTTGCTCTTCTCTGTTAGTTGATGACTAGCAGAAGAACTTATACAGTTGGATACAATTTTCGACACATTACATGGTGCATGTTATTGTAGTAATAGTTTCAGTCATTGGAAATGTTAGCACTCTACTCTTTGAAATATTATTTGACAAATAGTTAGAATCCAAGACCTAGAAAGGAAATGAAACAGAATTCAACAAATTTTCCCCTTCTTGATCCTTTACCTTGGGTGTATTCTTTTTAATCACGAAACAGTATTTTTTCTCTGCTAATTGATACATCATTCTTGATAGTTTCTTTTCCTTCCAGGTGGGGTTGGAATAGGGATCAAGACGTCGGAAAGAGTACACACAGAACGAGGGGTCAAGCATTCCGAATTTTGGCTAACCCTAATGTACGCTTCAACTCAAGGCTTCTGCATGTTTAATGGCAATATATTTGGTTTGAATATGGTCAAAGATTTTGTAGGTATGTCATTAGAAATTAATTAGTGGATGCATATATTCAGAGAATTCACACCTGCCCCCCATTCGGATTTGAATAGAACCAATCTTTCAGCATCTCTTTATGATTGAAATGAATTTGATTGAGTTGTCTGTCTGATTCATCATAATTATCTTGATTGGTTTTGATTTTGTTCTCTGAATGAAAACCATATTCTAAGTTGTTTATGGGCTTTTGTTCTGCAACAAACATATATCATGTCAATTGTTTAGGTCTCTCCCGGGAAAGATGACTTAATTAAGAAGGTGATTATGGTTGATCCTTTGGAAGCCAAACGTTTGGCTGCAAAAGAAATGGAAAAAATCAAAGCAAAAGAGAAGTTCAAGGTATGGGAAGCAATCATCAGTGATGCAAAACTTGTTTAATAAACCATATGGATATGCAGATAATGTTGTGAAATGTGATTGCAGAGACGACGTCAAATAGAAGCGATAAATGGAGCGTGGGCAATGATTGGTTTGACGGCAGGGCTCATCGTTGAAGGTCAAACTGGAAAAGGCATTCTAGCACAGGTGAGAAGTTATAGCGTTTTACGTTCTTTTGTATTCGTGCCATTTCTTTAACATTCTTTTGAACAAATTGATTGGTTTAGAACATTTGTTTATTCCTATATGCCAAGGAGTGATAGCTTAAGAAAGCTACCAAAGTAGCCACAATGACGACAGGAACTTATGGGTTCGGCCGCTTCGTTTCAATAGGTTATTTAAATACCAAAATTTTATAAGGTTATAACATAGTTACCATTTTTTATTTGAGTAAACATGGAATGCTTGTGTAATGTACCACATTGGTTGGGGAAGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCACACGCTTTTTAAAGCCTCGAGGAGAAGTTTGAAAGGGACAATATTTGTTAGCGGTAGGTCTGGGTCGTTACTACTTGTCAACTCTAACCAGTAGCCTCTTATGCCTTTGTTAAGCTTTCAAAGTGGAGAGAAGAAAAAAAGGAGAGAGAAAAACGAAAGATTGTGAGCTAACGAACTTGATTTTTACGAACAAAGATACTAAAATAAAAACGGAAATATAATGATATGGGACCTTACTGTGTAGAAACGAGACAACCAACCTAAACATGGTTAAGTGGATAAAAAGTAACATTACTTTCTTCCTATTAGAAGTTTTTTAAACACGAGTATTCTTTTGGTATATTGTGAGGTGTTCGGCTTGAGAGAAACAATATGATTTTTGGAGTGGAGAGGCCCTTTAACTGGGGCCGAGAGGAGGTGAGGTTTAATGGCTCAGTGTGAGCTTCGGTCGCTTAGCTTTTCTTTAGTTATGATCTTGGTTTGATTTTGTTGGATTCGAGTCCTTTTCGATAGCCTGTTCTTTGGGATTCTCTTCTATCGAGCTTGTTTTTTGTATGCACATGTCGTTTTTTTCGACGAAAGTTTAGTTTTTTACCGAACGAAAGCCTCTTACTCAATGTTGTTTTTCACTTATTTTCTAGTTGGCCGGCTACTTGGCCGCGGTTGTGAACTTCTTTGTACGGTAGACATCTTCAAGGGCAAAAGGACTTCTCCTTTGAATGGAAGAGTTATTCTCGTCTCGACCATCGAAAGTTCGGTATGTTAAATATTTTCGAGCTAAGTCCTATTGTTTGTTTATCGTTTTATACCTAAAGAAAAGGATGTTTCCATCCTAAGAAACAGAAGTCTGATTCTTCCTTCTTTTCAAGACTGATTTCTTCACATTTCATGTACAAATTTGACATTTAATTGTGAAAGTGTATTGAGATGGTTTGTTGC AAAACCGTCCCTCTCTGCAAGATAAGTGTGGATGTGGCCAACGGAAATCTGTTACTAATTCCATATAACAATGCTTTACTTCACCAATAGATAAGGGTTCTTGTGAAGAAGCGTGGTTTTTGAAGATGGCTTCCACTGCGCTGATTCTCCCCATCCATGGAGGAAACCTCTCTTTCCGCCATACCCACCCTTCTGCAACATTTTCCAGGTGGGGTTGGAATAGGGATCAAGACGTCGGAAAGAGTACACACAGAACGAGGGGTCAAGCATTCCGAATTTTGGCTAACCCTAATGTCTCTCCCGGGAAAGATGACTTAATTAAGAAGGTGATTATGGTTGATCCTTTGGAAGCCAAACGTTTGGCTGCAAAAGAAATGGAAAAAATCAAAGCAAAAGAGAAGTTCAAGAGACGACGTCAAATAGAAGCGATAAATGGAGCGTGGGCAATGATTGGTTTGACGGCAGGGCTCATCGTTGAAGGTCAAACTGGAAAAGGCATTCTAGCACAGTTGGCCGGCTACTTGGCCGCGGTTGTGAACTTCTTTGTACGGTAGACATCTTCAAGGGCAAAAGGACTTCTCCTTTGAATGGAAGAGTTATTCTCGTCTCGACCATCGAAAGTTCGGTATGTTAAATATTTTCGAGCTAAGTCCTATTGTTTGTTTATCGTTTTATACCTAAAGAAAAGGATGTTTCCATCCTAAGAAACAGAAGTCTGATTCTTCCTTCTTTTCAAGACTGATTTCTTCACATTTCATGTACAAATTTGACATTTAATTGTGAAAGTGTATTGAGATGGTTTGTTGC ATGGCTTCCACTGCGCTGATTCTCCCCATCCATGGAGGAAACCTCTCTTTCCGCCATACCCACCCTTCTGCAACATTTTCCAGGTGGGGTTGGAATAGGGATCAAGACGTCGGAAAGAGTACACACAGAACGAGGGGTCAAGCATTCCGAATTTTGGCTAACCCTAATGTCTCTCCCGGGAAAGATGACTTAATTAAGAAGGTGATTATGGTTGATCCTTTGGAAGCCAAACGTTTGGCTGCAAAAGAAATGGAAAAAATCAAAGCAAAAGAGAAGTTCAAGAGACGACGTCAAATAGAAGCGATAAATGGAGCGTGGGCAATGATTGGTTTGACGGCAGGGCTCATCGTTGAAGGTCAAACTGGAAAAGGCATTCTAGCACAGTTGGCCGGCTACTTGGCCGCGGTTGTGAACTTCTTTGTACGGTAG MASTALILPIHGGNLSFRHTHPSATFSRWGWNRDQDVGKSTHRTRGQAFRILANPNVSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLIVEGQTGKGILAQLAGYLAAVVNFFVR Homology
BLAST of Carg27984 vs. NCBI nr
Match: XP_022937783.1 (uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata] >XP_022937784.1 uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata] >KAG6586074.1 hypothetical protein SDJN03_18807, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020898.1 hypothetical protein SDJN02_17586 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg27984 vs. NCBI nr
Match: XP_023538319.1 (uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg27984 vs. NCBI nr
Match: XP_022969695.1 (uncharacterized protein LOC111468645 isoform X1 [Cucurbita maxima]) HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67 Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of Carg27984 vs. NCBI nr
Match: XP_038889814.1 (uncharacterized protein LOC120079625 [Benincasa hispida]) HSP 1 Score: 231.9 bits (590), Expect = 3.5e-57 Identity = 120/147 (81.63%), Postives = 132/147 (89.80%), Query Frame = 0
BLAST of Carg27984 vs. NCBI nr
Match: XP_022937785.1 (uncharacterized protein LOC111444076 isoform X2 [Cucurbita moschata]) HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Carg27984 vs. ExPASy TrEMBL
Match: A0A6J1FC77 (uncharacterized protein LOC111444076 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.4e-72 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg27984 vs. ExPASy TrEMBL
Match: A0A6J1I0N1 (uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468645 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67 Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of Carg27984 vs. ExPASy TrEMBL
Match: A0A6J1FHS7 (uncharacterized protein LOC111444076 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.4e-56 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Carg27984 vs. ExPASy TrEMBL
Match: A0A1S3BSE0 (uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.1e-55 Identity = 117/147 (79.59%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Carg27984 vs. ExPASy TrEMBL
Match: A0A6J1HYI7 (uncharacterized protein LOC111468645 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468645 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54 Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Carg27984 vs. TAIR 10
Match: AT4G28025.2 (unknown protein. ) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31 Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of Carg27984 vs. TAIR 10
Match: AT4G28025.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31 Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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