Carg27934 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCAGAGTTTCGTACCATCGGAGTCGAAGAATAGATTACGCCTCTGTACCTTCTTCATTGCCATATTACTTGGTGCTGGAGCTTATTTCATTGCAAGTGAATTCATTACAAAGGTAGAAATCGAAGCATATCTTTCTGAAGTTCCTATAGCTTCCTGTTGCATAGTGATGATAGTAGCAATATATCTTGGAGATTAAGTTTATGGGTTTGAAGTGTCCATGTTTATTCATGGCACTAAGCTTAAGTTGGTCATCTTTGAAAATGAAGGATTCAAAGAATTGGCTTTCTGTACCGCTTACAAAATTTAGTATCCTGCATCCAAAGTATTGGCTTTGCAGTTTACCGTGCGCTCACTGTCTATGGTATTCATTGGTGGTATCCCTTATATTTCTTGAATTTAGGCCCTAGATTGCTTAGTGCTTAAGTGTGAGATCGAACGAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGCAGATGTGTTGTAATACCTTGAGGGGAAGCCCAAAAGGGATAGCCCAAAGAGGACAATATCTGCTAGCGGTGGACTTTGACTGTTACATTAAGTACCATTCGAATTAACAATAGTCCTCCACTCTTACAAGAAGGGTTATGATGTATATGTGGTTGTTAAACTTCTTCCACTTGATATTTATTTGGGTTAATATTCATTGTATGAACTTCAAGCGTTCATCTTACTGGGTGTTCTTATGCCCAGCAGTATTTTTCTTATGTAGATTGTAACCATGCTTGTCAGAACAGAGCATCATATATCATCGTGCATTCAAATCATATGTCGATACAATTCGTCACTCAAAATGACCGAAACGAGTCAATGATAGGATATTTGATAAACTTGCAGGAAATGTTTAGATGGGAGGCATTTTATCCTGCCCGAAATGTAAAGTCCAGCACGTGCAAGGTTTGTCTAGTAAAATCCCGAGTTCTTTTTATGGTTTCTCATTGTATTTGTTCTAGTTTGTTAGGTGTTATAAATCTCCTTTCTCTCGCCTCATCCTCCTTCCTACGTAGAATCGATGCAGACCTCCTGGGAGTGAGTCTTTGCCAGAAGGAATCATTACTAAAACATCTAACTTCGAATTTCATCCTCTATGGGGTTCAAGTGTACGAAATGTAAGTGATGCACCGATTGAAATGTTGCTCGCCTATACAACGAATTTTTCTTTTTCAATAGAGTTTTCAGCTCATTTGAGTATAATTGAAAGTAAAAATTTCAGTTTTCATGATGTTTTAGTATATGATATTAGGTAACTACTTTCTTTGAATCGTGTACGTGGCTTGATACTCGACTATTTTACTTATATACAACTTAGCTAATGAATTCACGATATCGCTAGATAAAAACTGCACATATTATGCATTGCCCTTAAGTGACAATACTCTTTGTGCCAGAAAATGCTGAAGATGTCTAAGAACTTGTTAGCTATTGCTGTTGGAATCAAACAAAGACATGTAGTGTCGAAAATTGTCGAAAAGGTTGTCATCTAAAGCCCTTATTCTTCACTACACTTTTTAGCAATCTGTTTGTTTTTGAATATGTAGTTTTCATTCTCAGTTCCCTCGTGACGATTTTGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGATTTCGCATGGAGTTCTCGTGCACTACATGTCTCTGCATTGAATCAGACAAAATGGTAATGCTTATTTGACCCCAAGAGTTATCTGAAATTGCTGATCGTGTGTATCATTTGGACTCGAAGTTGCTTCTTTACTCTTTAAATTCGAACCATAATTGGAATAAAACTGGCTTATGGCGTAGGTGGTTCGCCAAGCGTTTCTTGCATCCAGATATTGTTGCTGAATATAATTATATCTTTCTTTGGGATGAGGACCTTGGCGTCGAGAATTTTAACCCGAAACGGTACGTATTATTTTCCTTTTCATGATTACGGAGTTCAAACCTGCAAATGCGTAGTTTATTGTTTATTTACCGCCTTTTTTTCCCCACAAGAGCTTAGCTCAATTGGCATAAAGTACGTATTCTCAACCAAAAGATTAGAAATTCGTATCCCCCATCTTGCATATTGTTGAACTAAAAAAAAAACGCTTTTGATCATTGAACATATAAGTAATAAGTTAGCTCATGGACTTTATTATGTAACAGTTTCGTCGTTGTACTCCAAAGTATCAATTCTTAGTATGTAACGACTTAGTTTTCTTTTCTTCATCTGAAACTGGGTCAGATATGTATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCAGTTAAGTCCAAGGTGCACCAGCTGCTTACTGCACGCAAAACTGGATCGAAAGTACACAGGTTAGTTTTACATGGGTTTTTTGTAACCGATGTGGGATCTCACATCTCCAATGGTCGAGTTTACTTGAATGGAATATCGATTTTGGGTGTTAGAGCTCCGTTGAACGCTATAACGATGTTTTTCGCACCAATTTTCTTAAATCTTCAAACAGAAGGTTTTATAACTTCAAGGGCAGTGGACGGTGCAACGCTAATAGCACGGCTCCTCCATGCACAGGGTAAAAAGATTATCGATTCTTTTGATCACGGACTTTTCTATTTTTTGATGTTGGATTCAAACTCAGGTTGTTAAATTGTGTATGTTTTATAAATTTGATGTAGATGGGTAGAAATGATGGCTCCTGTGTTCTCCAGGGCAGCATGGCGATGCACATGGTATATGATTCAGGTAACAACTACTATTGAAATGAGATTCAAATTATACTTCTCAAAAGTAGGAATATAAATGATCGTAAAACTATTTTAAAGACTAGTTGTGAGATCCCACGTCGGTTGGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAATCTCTCCTTAGCAGACGCGTTTTAAACACCTTGAGAGGAAGCTCGAAAGGGTAAGCCCAAAAGAGGACATGCTAGCGGTGGGCTTGGGCCGTTAGAAATGGTATTAGAGCTAGACACCAGGCAATGTGCCAGCAAGGAGGCTGAGCCCTAAAGGGGGTAGACACGAGGCGATGTGCTAGAAGGACGCTGGGCCCGAAGGAGGGAGGGTAGATTGGGGAGTCCCACGTTGATCGGACAAAGGAACGAGTGCCAGCGAGGATGCTAGACCTCGAAGGGAGGTGGATTGTGAGATCTCACGTCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAGTCCAAAGAGGACAATATCTATTAACGGTGGGCTTAGGCCGTTACACTAGTCTTTTGTTTATATTTAGTCCATTTTCTTACAATACAACAAATGTTTCAACTCACTCGTGATATCGATATCAAACGGACGTGTGAATACTGTGGTAATATTGTGATGGGGACAGAATTTTAATGCCAAAATACTTGGCTATTGCTCTCTTTGCTTTACAGAATGACTTGATCCATGCATGGGGCTTAGATCGACAGCTTGGCTATTGTGCACAAGTAATTTCCATACTCTACCATTACTTTTGCTTTGCTAGTAAGCCACTAGTTTCTTGTAGAGTTTGTGATCATGGATTCTCTTTTAGGGTGACCGAACACAAAAAGTTGGCGTTGTCGATGCCGAATACATCGTTCATCTAGGTCTGCCCACGCTCGGTGCTTCCCATGACAATGTGGTAAAGTTTTGCAGTCACAATCCTATGAATTTACGACTTCAAACGGTCATTTGTTGCACTTCCTTTTCTATGAATTTACGACTTCAAACGGTCATTTTGTTCGATTCTTGCAGGAACCCAAAATGGATAATCGAGTTAAAGTAAGTTACTACGATCGATCCAAGTATTTATTTCCTGAATGGATCGTTCATTGTTTGTAATGTATCCTAATATGTGTAGGTGAGGATGCAATCTTCCTTAGAAATGCAGATCTTTAAGGAACGATGGACGGACGCTGCAAAGAAGGACAAGTGTTGGATCGACCGGTATCGGTAGTTACCGGAATCGTTTAATGTTCATCTTAATGAATAAAACTGGAAGTGAAGGTGTTCCAGTCTTTCAGTAACAGAGCTCAAACACAGGCTGAGCATGCAGCTGCTTAGATAAGATTCTAGTTGTCTCACAACAACTTATACCCAACAAATTCAAATTAACCAAGAACGAGGCTTTTCATTGGATCAACTCACTTTCTTTTACTGTATACAAAATCATATCTTACATAACTTTTTTTTTTTGGTTGGTTGTAAATGCATTATAGTCTTTCGAGAAAATTAAGGTTTGGAAATTTGGTGTTTGTAAAAGTTTCCATGTAATTTGAATAAATGTAAACTTTCTTTTA ATGTTTCAGAGTTTCGTACCATCGGAGTCGAAGAATAGATTACGCCTCTGTACCTTCTTCATTGCCATATTACTTGGTGCTGGAGCTTATTTCATTGCAAGTGAATTCATTACAAAGGAAATGTTTAGATGGGAGGCATTTTATCCTGCCCGAAATGTAAAGTCCAGCACGTGCAAGAATCGATGCAGACCTCCTGGGAGTGAGTCTTTGCCAGAAGGAATCATTACTAAAACATCTAACTTCGAATTTCATCCTCTATGGGGTTCAAGTGTACGAAATAAAATGCTGAAGATGTCTAAGAACTTGTTAGCTATTGCTGTTGGAATCAAACAAAGACATGTAGTGTCGAAAATTGTCGAAAAGTTCCCTCGTGACGATTTTGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGATTTCGCATGGAGTTCTCGTGCACTACATGTCTCTGCATTGAATCAGACAAAATGGTGGTTCGCCAAGCGTTTCTTGCATCCAGATATTGTTGCTGAATATAATTATATCTTTCTTTGGGATGAGGACCTTGGCGTCGAGAATTTTAACCCGAAACGATATGTATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCAGTTAAGTCCAAGGTGCACCAGCTGCTTACTGCACGCAAAACTGGATCGAAAAGCTCCGTTGAACGCTATAACGATGTTTTTCGCACCAATTTTCTTAAATCTTCAAACAGAAGGTTTTATAACTTCAAGGGCAGTGGACGGTGCAACGCTAATAGCACGGCTCCTCCATGCACAGGATGGGTAGAAATGATGGCTCCTGTGTTCTCCAGGGCAGCATGGCGATGCACATGGTATATGATTCAGAATGACTTGATCCATGCATGGGGCTTAGATCGACAGCTTGGCTATTGTGCACAAGGTGACCGAACACAAAAAGTTGGCGTTGTCGATGCCGAATACATCGTTCATCTAGGTCTGCCCACGCTCGGTGCTTCCCATGACAATGTGGAACCCAAAATGGATAATCGAGTTAAAGTGAGGATGCAATCTTCCTTAGAAATGCAGATCTTTAAGGAACGATGGACGGACGCTGCAAAGAAGGACAAGTGTTGGATCGACCGGTATCGGTAGTTACCGGAATCGTTTAATGTTCATCTTAATGAATAAAACTGGAAGTGAAGGTGTTCCAGTCTTTCAGTAACAGAGCTCAAACACAGGCTGAGCATGCAGCTGCTTAGATAAGATTCTAGTTGTCTCACAACAACTTATACCCAACAAATTCAAATTAACCAAGAACGAGGCTTTTCATTGGATCAACTCACTTTCTTTTACTGTATACAAAATCATATCTTACATAACTTTTTTTTTTTGGTTGGTTGTAAATGCATTATAGTCTTTCGAGAAAATTAAGGTTTGGAAATTTGGTGTTTGTAAAAGTTTCCATGTAATTTGAATAAATGTAAACTTTCTTTTA ATGTTTCAGAGTTTCGTACCATCGGAGTCGAAGAATAGATTACGCCTCTGTACCTTCTTCATTGCCATATTACTTGGTGCTGGAGCTTATTTCATTGCAAGTGAATTCATTACAAAGGAAATGTTTAGATGGGAGGCATTTTATCCTGCCCGAAATGTAAAGTCCAGCACGTGCAAGAATCGATGCAGACCTCCTGGGAGTGAGTCTTTGCCAGAAGGAATCATTACTAAAACATCTAACTTCGAATTTCATCCTCTATGGGGTTCAAGTGTACGAAATAAAATGCTGAAGATGTCTAAGAACTTGTTAGCTATTGCTGTTGGAATCAAACAAAGACATGTAGTGTCGAAAATTGTCGAAAAGTTCCCTCGTGACGATTTTGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGATTTCGCATGGAGTTCTCGTGCACTACATGTCTCTGCATTGAATCAGACAAAATGGTGGTTCGCCAAGCGTTTCTTGCATCCAGATATTGTTGCTGAATATAATTATATCTTTCTTTGGGATGAGGACCTTGGCGTCGAGAATTTTAACCCGAAACGATATGTATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCAGTTAAGTCCAAGGTGCACCAGCTGCTTACTGCACGCAAAACTGGATCGAAAAGCTCCGTTGAACGCTATAACGATGTTTTTCGCACCAATTTTCTTAAATCTTCAAACAGAAGGTTTTATAACTTCAAGGGCAGTGGACGGTGCAACGCTAATAGCACGGCTCCTCCATGCACAGGATGGGTAGAAATGATGGCTCCTGTGTTCTCCAGGGCAGCATGGCGATGCACATGGTATATGATTCAGAATGACTTGATCCATGCATGGGGCTTAGATCGACAGCTTGGCTATTGTGCACAAGGTGACCGAACACAAAAAGTTGGCGTTGTCGATGCCGAATACATCGTTCATCTAGGTCTGCCCACGCTCGGTGCTTCCCATGACAATGTGGAACCCAAAATGGATAATCGAGTTAAAGTGAGGATGCAATCTTCCTTAGAAATGCAGATCTTTAAGGAACGATGGACGGACGCTGCAAAGAAGGACAAGTGTTGGATCGACCGGTATCGGTAG MFQSFVPSESKNRLRLCTFFIAILLGAGAYFIASEFITKEMFRWEAFYPARNVKSSTCKNRCRPPGSESLPEGIITKTSNFEFHPLWGSSVRNKMLKMSKNLLAIAVGIKQRHVVSKIVEKFPRDDFDVILFHYDGVVDEWRDFAWSSRALHVSALNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFNPKRYVSILKEEGLEISQPALDPVKSKVHQLLTARKTGSKSSVERYNDVFRTNFLKSSNRRFYNFKGSGRCNANSTAPPCTGWVEMMAPVFSRAAWRCTWYMIQNDLIHAWGLDRQLGYCAQGDRTQKVGVVDAEYIVHLGLPTLGASHDNVEPKMDNRVKVRMQSSLEMQIFKERWTDAAKKDKCWIDRYR Homology
BLAST of Carg27934 vs. NCBI nr
Match: KAG7032449.1 (hypothetical protein SDJN02_06497, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 798.5 bits (2061), Expect = 2.5e-227 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
BLAST of Carg27934 vs. NCBI nr
Match: XP_022930038.1 (uncharacterized protein LOC111436473 [Cucurbita moschata]) HSP 1 Score: 740.7 bits (1911), Expect = 6.2e-210 Identity = 359/380 (94.47%), Postives = 361/380 (95.00%), Query Frame = 0
BLAST of Carg27934 vs. NCBI nr
Match: XP_023530516.1 (uncharacterized protein LOC111793051 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 738.8 bits (1906), Expect = 2.4e-209 Identity = 357/380 (93.95%), Postives = 360/380 (94.74%), Query Frame = 0
BLAST of Carg27934 vs. NCBI nr
Match: KAG6601692.1 (hypothetical protein SDJN03_06925, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 734.2 bits (1894), Expect = 5.8e-208 Identity = 356/378 (94.18%), Postives = 359/378 (94.97%), Query Frame = 0
BLAST of Carg27934 vs. NCBI nr
Match: XP_022994238.1 (uncharacterized protein LOC111490034 [Cucurbita maxima]) HSP 1 Score: 732.3 bits (1889), Expect = 2.2e-207 Identity = 353/380 (92.89%), Postives = 360/380 (94.74%), Query Frame = 0
BLAST of Carg27934 vs. ExPASy TrEMBL
Match: A0A6J1ETW7 (uncharacterized protein LOC111436473 OS=Cucurbita moschata OX=3662 GN=LOC111436473 PE=4 SV=1) HSP 1 Score: 740.7 bits (1911), Expect = 3.0e-210 Identity = 359/380 (94.47%), Postives = 361/380 (95.00%), Query Frame = 0
BLAST of Carg27934 vs. ExPASy TrEMBL
Match: A0A6J1K4M3 (uncharacterized protein LOC111490034 OS=Cucurbita maxima OX=3661 GN=LOC111490034 PE=4 SV=1) HSP 1 Score: 732.3 bits (1889), Expect = 1.1e-207 Identity = 353/380 (92.89%), Postives = 360/380 (94.74%), Query Frame = 0
BLAST of Carg27934 vs. ExPASy TrEMBL
Match: A0A6J1FRZ3 (uncharacterized protein LOC111447910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447910 PE=4 SV=1) HSP 1 Score: 651.0 bits (1678), Expect = 3.1e-183 Identity = 313/402 (77.86%), Postives = 343/402 (85.32%), Query Frame = 0
BLAST of Carg27934 vs. ExPASy TrEMBL
Match: A0A6J1FS01 (uncharacterized protein LOC111447910 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447910 PE=4 SV=1) HSP 1 Score: 648.7 bits (1672), Expect = 1.6e-182 Identity = 312/402 (77.61%), Postives = 341/402 (84.83%), Query Frame = 0
BLAST of Carg27934 vs. ExPASy TrEMBL
Match: A0A6J1IIQ2 (uncharacterized protein LOC111474390 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474390 PE=4 SV=1) HSP 1 Score: 648.3 bits (1671), Expect = 2.0e-182 Identity = 314/402 (78.11%), Postives = 342/402 (85.07%), Query Frame = 0
BLAST of Carg27934 vs. TAIR 10
Match: AT4G18530.1 (Protein of unknown function (DUF707) ) HSP 1 Score: 446.0 bits (1146), Expect = 3.0e-125 Identity = 223/402 (55.47%), Postives = 278/402 (69.15%), Query Frame = 0
BLAST of Carg27934 vs. TAIR 10
Match: AT4G12840.1 (Protein of unknown function (DUF707) ) HSP 1 Score: 414.5 bits (1064), Expect = 9.5e-116 Identity = 207/393 (52.67%), Postives = 265/393 (67.43%), Query Frame = 0
BLAST of Carg27934 vs. TAIR 10
Match: AT4G12840.2 (Protein of unknown function (DUF707) ) HSP 1 Score: 414.5 bits (1064), Expect = 9.5e-116 Identity = 207/393 (52.67%), Postives = 265/393 (67.43%), Query Frame = 0
BLAST of Carg27934 vs. TAIR 10
Match: AT1G11170.1 (Protein of unknown function (DUF707) ) HSP 1 Score: 344.7 bits (883), Expect = 9.3e-95 Identity = 176/351 (50.14%), Postives = 231/351 (65.81%), Query Frame = 0
BLAST of Carg27934 vs. TAIR 10
Match: AT1G61240.1 (Protein of unknown function (DUF707) ) HSP 1 Score: 343.2 bits (879), Expect = 2.7e-94 Identity = 170/330 (51.52%), Postives = 225/330 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|