Carg27856 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27856
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein CONSTANS-LIKE 16-like
Location	Carg_Chr15: 6195637 .. 6196793 (-)
RNA-Seq Expression	Carg27856
Synteny	Carg27856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAATTGTAGATAAATGTTATTGCTTTCAAATTTTGAATTTTGTTTCTGAAAAGACTATAGGGTGGGCGTGGGCCGCCTTTCTCTGCCAATCCTGCGACTCCGCCGTCCATTCAGCCAACCCCCTGGCCCGTCGCCACCAACGCCTCCGCCTTAACTCACCCACCTCCTCCAATTCCAAAGCCCCTTCTCCCTCGTGGGTGTCCGGCTTCACCCGCAAGCCCCGCACCCCTCGGCCCCCTCCCCGCCCAAAATCCGACGACCTCCTCTCTAACCCCTCCTTCTCCCTCGTCCCCGAGGCCGACGACGCTACCTCCCATGAAGACAATGAAGAGGATCACCTCTTGTATAGAGTCCCCACCTTCGACCCCTTCCTCCCCTCCGATGATCTGGATCTTGCGGATTTTGCTACCGATTTGGAGAGGCAGTGCTTTGACATGGAGGGGCTCGGGTTGGTTAAGGTGGAGGATCTTCACGAACAACAAGAGGCTGATTACTGTAGGGCTCAACATCCATTCGAGGCTCAGATGGATCTGATGCGAGAGCCCTTCGAGTTGATACCAGTGGTGGATGTCAAGAATGAAAGACAAGAGGATTGTGCAGAGGAAACAGAGGCTGAATCGAAAACGCAGAGGAAAGGAAGAGTGACATTGCGATTGGATTGTGAGGCAGTAATTGCCGCCTGGGGTGACGACAAGTCTCCATGGACTACCGGAGAACGCCCCGATTTAGACCCCGACCAACCCTGGCCTCACTTCATGGTTGTCTTCAACTCCCTCTCACTCAAAACTCGCATAATTCTAAATAACATTTGCAAATACGGAAAAAAAATGAAATGAAATCAAATGTGGCCTTCTAACCCATTAATCAATTAATGTTGTTAATGTTAAGAATGATATTGCAGGCGTTTTGTGAAGTGAGGAACGGGCAGGGGTGTGGGGAATATGGGATGAGCACGGCGGCGATGGGGGACGGCGGGAGGGAGGCGCGTGTTTCGCGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTACGAAGTTAGGAAATTGAATGCGGAGAAGAGACCCAGAATGAAAGGGAGGTTCGTGAAGAGAACAGCTTTTACACACCCAGTTCTTCCCATTATGAGTATCAAGTAA

mRNA sequence

ATGGAGGAAATTGTAGATAAATGTTATTGCTTTCAAATTTTGAATTTTGTTTCTGAAAAGACTATAGGGTGGGCGTGGGCCGCCTTTCTCTGCCAATCCTGCGACTCCGCCGTCCATTCAGCCAACCCCCTGGCCCGTCGCCACCAACGCCTCCGCCTTAACTCACCCACCTCCTCCAATTCCAAAGCCCCTTCTCCCTCGTGGGTGTCCGGCTTCACCCGCAAGCCCCGCACCCCTCGGCCCCCTCCCCGCCCAAAATCCGACGACCTCCTCTCTAACCCCTCCTTCTCCCTCGTCCCCGAGGCCGACGACGCTACCTCCCATGAAGACAATGAAGAGGATCACCTCTTGTATAGAGTCCCCACCTTCGACCCCTTCCTCCCCTCCGATGATCTGGATCTTGCGGATTTTGCTACCGATTTGGAGAGGCAGTGCTTTGACATGGAGGGGCTCGGGTTGGTTAAGGTGGAGGATCTTCACGAACAACAAGAGGCTGATTACTGTAGGGCTCAACATCCATTCGAGGCTCAGATGGATCTGATGCGAGAGCCCTTCGAGTTGATACCAGTGGTGGATGTCAAGAATGAAAGACAAGAGGATTGTGCAGAGGAAACAGAGGCTGAATCGAAAACGCAGAGGAAAGGAAGAGTGACATTGCGATTGGATTGTGAGGCAGTAATTGCCGCCTGGGGTGACGACAAGTCTCCATGGACTACCGGAGAACGCCCCGATTTAGACCCCGACCAACCCTGGCCTCACTTCATGGCGTTTTGTGAAGTGAGGAACGGGCAGGGGTGTGGGGAATATGGGATGAGCACGGCGGCGATGGGGGACGGCGGGAGGGAGGCGCGTGTTTCGCGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTACGAAGTTAGGAAATTGAATGCGGAGAAGAGACCCAGAATGAAAGGGAGGTTCGTGAAGAGAACAGCTTTTACACACCCAGTTCTTCCCATTATGAGTATCAAGTAA

Coding sequence (CDS)

ATGGAGGAAATTGTAGATAAATGTTATTGCTTTCAAATTTTGAATTTTGTTTCTGAAAAGACTATAGGGTGGGCGTGGGCCGCCTTTCTCTGCCAATCCTGCGACTCCGCCGTCCATTCAGCCAACCCCCTGGCCCGTCGCCACCAACGCCTCCGCCTTAACTCACCCACCTCCTCCAATTCCAAAGCCCCTTCTCCCTCGTGGGTGTCCGGCTTCACCCGCAAGCCCCGCACCCCTCGGCCCCCTCCCCGCCCAAAATCCGACGACCTCCTCTCTAACCCCTCCTTCTCCCTCGTCCCCGAGGCCGACGACGCTACCTCCCATGAAGACAATGAAGAGGATCACCTCTTGTATAGAGTCCCCACCTTCGACCCCTTCCTCCCCTCCGATGATCTGGATCTTGCGGATTTTGCTACCGATTTGGAGAGGCAGTGCTTTGACATGGAGGGGCTCGGGTTGGTTAAGGTGGAGGATCTTCACGAACAACAAGAGGCTGATTACTGTAGGGCTCAACATCCATTCGAGGCTCAGATGGATCTGATGCGAGAGCCCTTCGAGTTGATACCAGTGGTGGATGTCAAGAATGAAAGACAAGAGGATTGTGCAGAGGAAACAGAGGCTGAATCGAAAACGCAGAGGAAAGGAAGAGTGACATTGCGATTGGATTGTGAGGCAGTAATTGCCGCCTGGGGTGACGACAAGTCTCCATGGACTACCGGAGAACGCCCCGATTTAGACCCCGACCAACCCTGGCCTCACTTCATGGCGTTTTGTGAAGTGAGGAACGGGCAGGGGTGTGGGGAATATGGGATGAGCACGGCGGCGATGGGGGACGGCGGGAGGGAGGCGCGTGTTTCGCGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTACGAAGTTAGGAAATTGAATGCGGAGAAGAGACCCAGAATGAAAGGGAGGTTCGTGAAGAGAACAGCTTTTACACACCCAGTTCTTCCCATTATGAGTATCAAGTAA

Protein sequence

MEEIVDKCYCFQILNFVSEKTIGWAWAAFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPIMSIK

Homology

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BLAST of Carg27856 vs. NCBI nr
Match: KAG7016788.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 688.7 bits (1776), Expect = 2.5e-194
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MEEIVDKCYCFQILNFVSEKTIGWAWAAFLCQSCDSAVHSANPLARRHQRLRLNSPTSSN 60
           MEEIVDKCYCFQILNFVSEKTIGWAWAAFLCQSCDSAVHSANPLARRHQRLRLNSPTSSN
Sbjct: 1   MEEIVDKCYCFQILNFVSEKTIGWAWAAFLCQSCDSAVHSANPLARRHQRLRLNSPTSSN 60

Query: 61  SKAPSPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHEDNEEDHLLYRV 120
           SKAPSPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHEDNEEDHLLYRV
Sbjct: 61  SKAPSPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHEDNEEDHLLYRV 120

Query: 121 PTFDPFLPSDDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDL 180
           PTFDPFLPSDDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDL
Sbjct: 121 PTFDPFLPSDDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDL 180

Query: 181 MREPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTG 240
           MREPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTG
Sbjct: 181 MREPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTG 240

Query: 241 ERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKK 300
           ERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKK
Sbjct: 241 ERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKK 300

Query: 301 IRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPIMSIK 338
           IRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPIMSIK
Sbjct: 301 IRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPIMSIK 337

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BLAST of Carg27856 vs. NCBI nr
Match: KAG6579277.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 627.5 bits (1617), Expect = 6.8e-176
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 35  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 94

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD
Sbjct: 95  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 154

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA
Sbjct: 155 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 214

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG
Sbjct: 215 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 274

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGMSTA MGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT
Sbjct: 275 EYGMSTAVMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 334

Query: 328 HPVLPIMSIK 338
           HPVLPIMSIK
Sbjct: 335 HPVLPIMSIK 344

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BLAST of Carg27856 vs. NCBI nr
Match: XP_022938378.1 (zinc finger protein CONSTANS-LIKE 16-like [Cucurbita moschata])

HSP 1 Score: 616.3 bits (1588), Expect = 1.6e-172
Identity = 303/310 (97.74%), Postives = 307/310 (99.03%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSK PSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 36  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKPPSPSWVSGFTRKPRTPRPPPRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCF+
Sbjct: 96  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFE 155

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLM+EPFELIPV+DVKNERQEDCAEETE 
Sbjct: 156 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMQEPFELIPVMDVKNERQEDCAEETED 215

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFC VRNGQGCG
Sbjct: 216 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCGVRNGQGCG 275

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT
Sbjct: 276 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 335

Query: 328 HPVLPIMSIK 338
           HPVLPI+SIK
Sbjct: 336 HPVLPIVSIK 345

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BLAST of Carg27856 vs. NCBI nr
Match: XP_023520465.1 (zinc finger protein CONSTANS-LIKE 16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.8 bits (1553), Expect = 1.8e-168
Identity = 300/310 (96.77%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDS VHSANPLARRHQRLRLNSPTSS+SK PSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 36  AFLCQSCDS-VHSANPLARRHQRLRLNSPTSSDSKPPSPSWVSGFTRKPRTPRPPPRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFA DLERQCFD
Sbjct: 96  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFAADLERQCFD 155

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQH FEAQMDLMREPFELIPVVDVKNERQEDCAEETE 
Sbjct: 156 MEGLGLVKVEDLHEQQEADYCRAQHQFEAQMDLMREPFELIPVVDVKNERQEDCAEETED 215

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQRK RVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRN QGCG
Sbjct: 216 ESKTQRKRRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNRQGCG 275

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGMST AMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT
Sbjct: 276 EYGMSTVAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 335

Query: 328 HPVLPIMSIK 338
           HPVLPI+SIK
Sbjct: 336 HPVLPIVSIK 344

[Close]

BLAST of Carg27856 vs. NCBI nr
Match: XP_022973550.1 (zinc finger protein CONSTANS-LIKE 16-like [Cucurbita maxima])

HSP 1 Score: 591.3 bits (1523), Expect = 5.4e-165
Identity = 294/310 (94.84%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSK PSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 36  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKPPSPSWVSGFTRKPRTPRPPPRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPS DLDLADFA+DLERQCFD
Sbjct: 96  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSHDLDLADFASDLERQCFD 155

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQH FEAQMD+MREPFELIPVVDVKNERQEDCAEETE 
Sbjct: 156 MEGLGLVKVEDLHEQQEADYCRAQHQFEAQMDVMREPFELIPVVDVKNERQEDCAEETED 215

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQ K RVTL LDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMA C  RNGQGCG
Sbjct: 216 ESKTQMKRRVTLLLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMALCGGRNGQGCG 275

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGM TAAMGDG REARV RYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTA T
Sbjct: 276 EYGMGTAAMGDGRREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTALT 335

Query: 328 HPVLPIMSIK 338
           HPVLPIMSIK
Sbjct: 336 HPVLPIMSIK 345

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BLAST of Carg27856 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-43
Identity = 146/396 (36.87%), Postives = 192/396 (48.48%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPT------SSNSKAPSP----SWVSGFTRKPR 87
           AFLCQSCDS VHSANPLARRH+R+RL + +      S++S A  P    +W  GFTRK R
Sbjct: 34  AFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKAR 93

Query: 88  TPRPPPRPKSDDLLSNPSFSLVPE--ADDATSHEDNEEDHLLYRVPTFDP---------- 147
           TPR   +  +  +  +    LVP+   +D T + + EE  L+ +VP  DP          
Sbjct: 94  TPRGSGKKNNSSIFHD----LVPDISIEDQTDNYELEE-QLICQVPVLDPLVSEQFLNDV 153

Query: 148 -----------------------------FLPSDDLDLADFATD--------LERQCFDM 207
                                        F P+ D++L +FA D        L+ + + M
Sbjct: 154 VEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPT-DMELEEFAADVETLLGRGLDTESYAM 213

Query: 208 EGLGL-----VKVEDLHEQQEADYCRAQH---------------PFEAQMDLMREPFELI 267
           E LGL      K+E    ++E +  +A                 PFE   D         
Sbjct: 214 EELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSE 273

Query: 268 PVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPD 327
             V    E   +C  + + E   + K  + LRL+ ++VI+ WG    PW++GE P+ D D
Sbjct: 274 EEVMKNVESSGECVVKVKEE---EHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMD 333

Query: 328 -QPWPHFMAFCEVRNG----------QGCGEYGMSTAAMGDGGREARVSRYREKRRTRLF 334
              WP   AF  V NG           GC    + ++  GDGGREARVSRYREKRRTRLF
Sbjct: 334 ISGWP---AFSMVENGGESTHQKQYVGGC----LPSSGFGDGGREARVSRYREKRRTRLF 393

[Close]

BLAST of Carg27856 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 9.5e-40
Identity = 144/378 (38.10%), Postives = 185/378 (48.94%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSP----SWVSGFTRKPRTPRPPP 87
           AFLC +CD +VHSANPLARRH+R+RL S ++   +  SP    +W  GFTRK RTPR   
Sbjct: 34  AFLCHACDGSVHSANPLARRHERVRLKSASAGKYRHASPPHQATWHQGFTRKARTPR--G 93

Query: 88  RPKSDDLLSNPSFSLVPE---ADDATSHEDNEEDHLLYRVPTFD---------------- 147
             KS  ++ +    LVPE    D A S+E   E+ L++ VP  +                
Sbjct: 94  GKKSHTMVFH---DLVPEMSTEDQAESYE--VEEQLIFEVPVMNSMVEEQCFNQSLEKQN 153

Query: 148 --PFLP-----SD-----------------DLDLADFATDLE-------RQCFDMEGLGL 207
             P +P     SD                 D++LA F  D+E       R+   +E LGL
Sbjct: 154 EFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGL 213

Query: 208 ---VKVE------------DLHEQQEADYCRAQHPFEAQMD------LMREPFELIPVVD 267
              +K+E            ++H+Q E D      PFE   D         +  E     D
Sbjct: 214 GEMLKIEKEEVEEEGVVTREVHDQDEGD---ETSPFEISFDYEYTHKTTFDEGEEDEKED 273

Query: 268 VKNERQEDCAEETEAESKTQRKGR-VTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPW 326
           V     E    E     K ++K + + LRLD E+VI+ WG    PWT     ++D D   
Sbjct: 274 VMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVC 333

[Close]

BLAST of Carg27856 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-36
Identity = 136/352 (38.64%), Postives = 181/352 (51.42%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRL--NSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRP 87
           AFLCQSCD+++HSAN LA+RH+R+RL  +SPT +  K  S  W  GF RK RTPR     
Sbjct: 40  AFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTS-VWYEGFRRKARTPRSKSCA 99

Query: 88  KSDDLLSNPSFSLVPE----ADD---ATSHEDNEEDHLLYRVPTFDPF--LPSDDL---- 147
               L    +  LVPE     DD   + S  +  E+ L   VP FDPF  +  DD+    
Sbjct: 100 FEKLLQIESNDPLVPELGGDEDDGFFSFSSVEETEESLNCCVPVFDPFSDMLIDDINGFC 159

Query: 148 ---DLADFAT------DLERQCFDMEG-LGLVKVE--------DLHEQQEADYCRAQHPF 207
              D  +  T      ++E+   D EG +G V ++        D+    E +        
Sbjct: 160 LVPDEVNNTTTNGELGEVEKAIMDDEGFMGFVPLDMDLEDLTMDVESLLEEEQLCLGFKE 219

Query: 208 EAQMDLMREPFEL---IPVVDVKNERQEDCAEE-------------TEAESKTQRKGRVT 267
              + +++E  ++   I   D+K  + ED  EE              EA +   RK  + 
Sbjct: 220 PNDVGVIKEENKVGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLF 279

Query: 268 LRLDCEAVIAAWGDDKSPWTTGERPD--LDPDQPWPHFMAFCE---VRNGQGCGEYGMST 326
           LRLD  AVI+AW +  SPW TG +P+  L  +   PH +   E     +G    + G   
Sbjct: 280 LRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDG 339

[Close]

BLAST of Carg27856 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-22
Identity = 107/322 (33.23%), Postives = 143/322 (44.41%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPS----WVSGFTRKPRTPR--- 87
           AFLC  CD +VHSAN +A +H+R+ L +   SN      +    W SGF RK RTPR   
Sbjct: 38  AFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTLTSVWHSGFRRKARTPRSRY 97

Query: 88  -PPPRPKSDD----------LLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPS 147
              P+ K DD           +       +PEA+D         D +   VP F+ F   
Sbjct: 98  EKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND---------DDMTSLVPEFEGFTEM 157

Query: 148 DDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQE-------ADYCRAQHPFEAQMDLMR 207
                    T+   + F+ E      +EDL+   E       A+ C  Q+    + D   
Sbjct: 158 GFFLSNHNGTEETTKQFNFEE-EADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKD--- 217

Query: 208 EPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGER 267
             ++ +  V  K E  EDC E                RL+ E VIAAW   +SP     +
Sbjct: 218 --YDNVITVSEKTEEIEDCYENNARH-----------RLNYENVIAAWDKQESP--RDVK 277

Query: 268 PDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIR 325
            +    Q  P  +    VR+                  REARV RYR+KR+ RLF KKIR
Sbjct: 278 NNTSSFQLVPPGIEEKRVRS-----------------EREARVWRYRDKRKNRLFEKKIR 314

[Close]

BLAST of Carg27856 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-14
Identity = 58/122 (47.54%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 203 EETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRN 262
           E+TE E+  +R G + L+LD + V+ AW D  SP+         PD+           R 
Sbjct: 323 EDTE-ETSLKRTGPL-LKLDYDGVLEAWSDKTSPF---------PDEIQGSEAVDVNARL 382

Query: 263 GQGCGEYGMSTAAMGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 322
            Q            GD G REA V RY+EKRRTRLFSKKIRY+VRKLNA++RPRMKGRFV
Sbjct: 383 AQ--------IDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFV 425

Query: 323 KR 324
           +R
Sbjct: 443 RR 425

[Close]

BLAST of Carg27856 vs. ExPASy TrEMBL
Match: A0A6J1FIQ3 (zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC111444644 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.5e-173
Identity = 303/310 (97.74%), Postives = 307/310 (99.03%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSK PSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 36  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKPPSPSWVSGFTRKPRTPRPPPRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCF+
Sbjct: 96  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFE 155

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLM+EPFELIPV+DVKNERQEDCAEETE 
Sbjct: 156 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMQEPFELIPVMDVKNERQEDCAEETED 215

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFC VRNGQGCG
Sbjct: 216 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCGVRNGQGCG 275

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT
Sbjct: 276 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 335

Query: 328 HPVLPIMSIK 338
           HPVLPI+SIK
Sbjct: 336 HPVLPIVSIK 345

[Close]

BLAST of Carg27856 vs. ExPASy TrEMBL
Match: A0A6J1IBM5 (zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita maxima OX=3661 GN=LOC111472084 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.6e-165
Identity = 294/310 (94.84%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSK PSPSWVSGFTRKPRTPRPPPRPKS
Sbjct: 36  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKPPSPSWVSGFTRKPRTPRPPPRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSDDLDLADFATDLERQCFD 147
           DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPS DLDLADFA+DLERQCFD
Sbjct: 96  DDLLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPSHDLDLADFASDLERQCFD 155

Query: 148 MEGLGLVKVEDLHEQQEADYCRAQHPFEAQMDLMREPFELIPVVDVKNERQEDCAEETEA 207
           MEGLGLVKVEDLHEQQEADYCRAQH FEAQMD+MREPFELIPVVDVKNERQEDCAEETE 
Sbjct: 156 MEGLGLVKVEDLHEQQEADYCRAQHQFEAQMDVMREPFELIPVVDVKNERQEDCAEETED 215

Query: 208 ESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCG 267
           ESKTQ K RVTL LDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMA C  RNGQGCG
Sbjct: 216 ESKTQMKRRVTLLLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMALCGGRNGQGCG 275

Query: 268 EYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFT 327
           EYGM TAAMGDG REARV RYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTA T
Sbjct: 276 EYGMGTAAMGDGRREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTALT 335

Query: 328 HPVLPIMSIK 338
           HPVLPIMSIK
Sbjct: 336 HPVLPIMSIK 345

[Close]

BLAST of Carg27856 vs. ExPASy TrEMBL
Match: A0A6J1I7W9 (zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita maxima OX=3661 GN=LOC111470448 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 5.9e-101
Identity = 224/359 (62.40%), Postives = 249/359 (69.36%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLN   +++SK PSPSWVSGFTRKPRTPR  PR KS
Sbjct: 35  AFLCQSCDSAVHSANPLARRHQRLRLN---TASSKPPSPSWVSGFTRKPRTPR--PRRKS 94

Query: 88  DD---LLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDP------------------- 147
           DD   LLSNPSFSLVPEADD T  E+NEEDHLLYRVPTF+P                   
Sbjct: 95  DDVVPLLSNPSFSLVPEADDGTWVEENEEDHLLYRVPTFEPFVEETQSSKSMGDEAGNFH 154

Query: 148 -FLPSDDLDLADFATD--------LERQCFDMEGLGL-------------VKVEDLHEQQ 207
            FLPS DLDL +FA D        LE +CFDMEGLG+             VK E+  E+ 
Sbjct: 155 GFLPS-DLDLEEFAADVESLLGRNLESECFDMEGLGIGLSIEKDDTSTRRVKGEEDGEEA 214

Query: 208 EADYCRAQHPFEAQMDLMREPFEL--------IPVVDVKNER-QEDCAEETEAESKTQRK 267
           +   CR ++  EA++DLMREPFEL        + +V VKNER +EDC  E   E K ++K
Sbjct: 215 DRGNCRFENELEAEVDLMREPFELNFEEYEQELKMVGVKNEREEEDCKVE---EDKVKKK 274

Query: 268 GRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTA 327
            +V L+LDC+AVIAAWG+DKSPWTTGERPD +PD  WPH MA C VR    CGEYG    
Sbjct: 275 RKVGLQLDCDAVIAAWGNDKSPWTTGERPDFEPDSSWPHCMAICGVR----CGEYGGGR- 334

Query: 328 AMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPI 334
              DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT F    LPI
Sbjct: 335 ---DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTGFPQSTLPI 376

[Close]

BLAST of Carg27856 vs. ExPASy TrEMBL
Match: A0A6J1E1S4 (zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC111430009 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.7e-98
Identity = 221/359 (61.56%), Postives = 247/359 (68.80%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCDSAVHSANPLARRHQRLRLN   +++SK PSPSWVSGFTRKPRTPR  PR KS
Sbjct: 35  AFLCQSCDSAVHSANPLARRHQRLRLN---TASSKPPSPSWVSGFTRKPRTPR--PRRKS 94

Query: 88  DD---LLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDP------------------- 147
           DD   LLSNPSFSLVPEAD+ T  E+NEEDHLLYRVPTF+P                   
Sbjct: 95  DDVVSLLSNPSFSLVPEADEGTWVEENEEDHLLYRVPTFEPFVDETQSSKSMGDEAGNFH 154

Query: 148 -FLPSDDLDLADFATD--------LERQCFDMEGLGL-------------VKVEDLHEQQ 207
            FLPS DLDL +FA D        LE +CFDMEGLG+             VKVE+  E+ 
Sbjct: 155 GFLPS-DLDLEEFAADVESLLGRNLESECFDMEGLGIGLSIEKDDTSTRRVKVEEDGEEA 214

Query: 208 EADYCRAQHPFEAQMDLMREPFEL--------IPVVDVKNER-QEDCAEETEAESKTQRK 267
               CR ++  EA++DLMREPFEL        + +V VK ER +EDC  E   E K ++K
Sbjct: 215 NRGNCRFENELEAEVDLMREPFELNLEEYVQELKMVGVKKEREEEDCKVE---EDKLKKK 274

Query: 268 GRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTA 327
            +V L+LD +AVIAAWG+DKSPWTTGERPD +PD  WPH +A C VR    CGEYG    
Sbjct: 275 RKVGLQLDWDAVIAAWGNDKSPWTTGERPDFEPDNSWPHCVAICGVR----CGEYGGR-- 334

Query: 328 AMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTAFTHPVLPI 334
              DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT F    LPI
Sbjct: 335 ---DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTGFPQSTLPI 375

[Close]

BLAST of Carg27856 vs. ExPASy TrEMBL
Match: A0A0A0K964 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039540 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.3e-89
Identity = 202/320 (63.12%), Postives = 235/320 (73.44%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRPKS 87
           AFLCQSCD+ VHSANPLARRHQRLRLN+  S++S   SPSWVSGFTRKPRTPR  PRPKS
Sbjct: 36  AFLCQSCDTTVHSANPLARRHQRLRLNA--SNSSPLNSPSWVSGFTRKPRTPR--PRPKS 95

Query: 88  DDLLSNPSFSLVPEADDATSHEDNE-EDHLLYRVPTFDPFLPSDDLDLADFATD----LE 147
           +DL+     S+VPE DDATSHE+   ED LLYRVP         D++++DF  D    LE
Sbjct: 96  NDLI---HVSVVPETDDATSHENEHLEDQLLYRVPNL-------DVNVSDFGGDVERNLE 155

Query: 148 RQCFDM-EGLGLVKVEDLHEQQEADYCRAQHPFEA-QMDLMR--EPFELIP-VVDVKNER 207
           R+ FD+ E LGLVKVE+       D  R    F++ Q+D     E  ++ P VV VKNER
Sbjct: 156 REWFDIEEELGLVKVEE-------DCWRIGEGFDSDQVDFFMDFEEIKMPPLVVGVKNER 215

Query: 208 QEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAF 267
            ED  +E+    K +R+  ++LRLDCEAVIAAWG+ +SPWT G+RPD DPDQPWP+ M  
Sbjct: 216 HEDEGDESGITDKNKRR-VLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMDL 275

Query: 268 CEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 327
           CEVR GQ CGEYG  TAA+GDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK
Sbjct: 276 CEVRYGQRCGEYGFRTAAIGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 333

Query: 328 GRFVKRTAFT-HPVLPIMSI 337
           GRFVKRT F   P LPI++I
Sbjct: 336 GRFVKRTPFAPQPTLPIITI 333

[Close]

BLAST of Carg27856 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-44
Identity = 146/396 (36.87%), Postives = 192/396 (48.48%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPT------SSNSKAPSP----SWVSGFTRKPR 87
           AFLCQSCDS VHSANPLARRH+R+RL + +      S++S A  P    +W  GFTRK R
Sbjct: 34  AFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKAR 93

Query: 88  TPRPPPRPKSDDLLSNPSFSLVPE--ADDATSHEDNEEDHLLYRVPTFDP---------- 147
           TPR   +  +  +  +    LVP+   +D T + + EE  L+ +VP  DP          
Sbjct: 94  TPRGSGKKNNSSIFHD----LVPDISIEDQTDNYELEE-QLICQVPVLDPLVSEQFLNDV 153

Query: 148 -----------------------------FLPSDDLDLADFATD--------LERQCFDM 207
                                        F P+ D++L +FA D        L+ + + M
Sbjct: 154 VEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPT-DMELEEFAADVETLLGRGLDTESYAM 213

Query: 208 EGLGL-----VKVEDLHEQQEADYCRAQH---------------PFEAQMDLMREPFELI 267
           E LGL      K+E    ++E +  +A                 PFE   D         
Sbjct: 214 EELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSE 273

Query: 268 PVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGERPDLDPD 327
             V    E   +C  + + E   + K  + LRL+ ++VI+ WG    PW++GE P+ D D
Sbjct: 274 EEVMKNVESSGECVVKVKEE---EHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMD 333

Query: 328 -QPWPHFMAFCEVRNG----------QGCGEYGMSTAAMGDGGREARVSRYREKRRTRLF 334
              WP   AF  V NG           GC    + ++  GDGGREARVSRYREKRRTRLF
Sbjct: 334 ISGWP---AFSMVENGGESTHQKQYVGGC----LPSSGFGDGGREARVSRYREKRRTRLF 393

[Close]

BLAST of Carg27856 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 165.6 bits (418), Expect = 6.8e-41
Identity = 144/378 (38.10%), Postives = 185/378 (48.94%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSP----SWVSGFTRKPRTPRPPP 87
           AFLC +CD +VHSANPLARRH+R+RL S ++   +  SP    +W  GFTRK RTPR   
Sbjct: 34  AFLCHACDGSVHSANPLARRHERVRLKSASAGKYRHASPPHQATWHQGFTRKARTPR--G 93

Query: 88  RPKSDDLLSNPSFSLVPE---ADDATSHEDNEEDHLLYRVPTFD---------------- 147
             KS  ++ +    LVPE    D A S+E   E+ L++ VP  +                
Sbjct: 94  GKKSHTMVFH---DLVPEMSTEDQAESYE--VEEQLIFEVPVMNSMVEEQCFNQSLEKQN 153

Query: 148 --PFLP-----SD-----------------DLDLADFATDLE-------RQCFDMEGLGL 207
             P +P     SD                 D++LA F  D+E       R+   +E LGL
Sbjct: 154 EFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGL 213

Query: 208 ---VKVE------------DLHEQQEADYCRAQHPFEAQMD------LMREPFELIPVVD 267
              +K+E            ++H+Q E D      PFE   D         +  E     D
Sbjct: 214 GEMLKIEKEEVEEEGVVTREVHDQDEGD---ETSPFEISFDYEYTHKTTFDEGEEDEKED 273

Query: 268 VKNERQEDCAEETEAESKTQRKGR-VTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPW 326
           V     E    E     K ++K + + LRLD E+VI+ WG    PWT     ++D D   
Sbjct: 274 VMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVC 333

[Close]

BLAST of Carg27856 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-37
Identity = 136/352 (38.64%), Postives = 181/352 (51.42%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRL--NSPTSSNSKAPSPSWVSGFTRKPRTPRPPPRP 87
           AFLCQSCD+++HSAN LA+RH+R+RL  +SPT +  K  S  W  GF RK RTPR     
Sbjct: 40  AFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTS-VWYEGFRRKARTPRSKSCA 99

Query: 88  KSDDLLSNPSFSLVPE----ADD---ATSHEDNEEDHLLYRVPTFDPF--LPSDDL---- 147
               L    +  LVPE     DD   + S  +  E+ L   VP FDPF  +  DD+    
Sbjct: 100 FEKLLQIESNDPLVPELGGDEDDGFFSFSSVEETEESLNCCVPVFDPFSDMLIDDINGFC 159

Query: 148 ---DLADFAT------DLERQCFDMEG-LGLVKVE--------DLHEQQEADYCRAQHPF 207
              D  +  T      ++E+   D EG +G V ++        D+    E +        
Sbjct: 160 LVPDEVNNTTTNGELGEVEKAIMDDEGFMGFVPLDMDLEDLTMDVESLLEEEQLCLGFKE 219

Query: 208 EAQMDLMREPFEL---IPVVDVKNERQEDCAEE-------------TEAESKTQRKGRVT 267
              + +++E  ++   I   D+K  + ED  EE              EA +   RK  + 
Sbjct: 220 PNDVGVIKEENKVGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLF 279

Query: 268 LRLDCEAVIAAWGDDKSPWTTGERPD--LDPDQPWPHFMAFCE---VRNGQGCGEYGMST 326
           LRLD  AVI+AW +  SPW TG +P+  L  +   PH +   E     +G    + G   
Sbjct: 280 LRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDG 339

[Close]

BLAST of Carg27856 vs. TAIR 10
Match: AT1G49130.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 107/322 (33.23%), Postives = 143/322 (44.41%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPS----WVSGFTRKPRTPR--- 87
           AFLC  CD +VHSAN +A +H+R+ L +   SN      +    W SGF RK RTPR   
Sbjct: 45  AFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTLTSVWHSGFRRKARTPRSRY 104

Query: 88  -PPPRPKSDD----------LLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPS 147
              P+ K DD           +       +PEA+D         D +   VP F+ F   
Sbjct: 105 EKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND---------DDMTSLVPEFEGFTEM 164

Query: 148 DDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQE-------ADYCRAQHPFEAQMDLMR 207
                    T+   + F+ E      +EDL+   E       A+ C  Q+    + D   
Sbjct: 165 GFFLSNHNGTEETTKQFNFEE-EADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKD--- 224

Query: 208 EPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGER 267
             ++ +  V  K E  EDC E                RL+ E VIAAW   +SP     +
Sbjct: 225 --YDNVITVSEKTEEIEDCYENNARH-----------RLNYENVIAAWDKQESP--RDVK 284

Query: 268 PDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIR 325
            +    Q  P  +    VR+                  REARV RYR+KR+ RLF KKIR
Sbjct: 285 NNTSSFQLVPPGIEEKRVRS-----------------EREARVWRYRDKRKNRLFEKKIR 321

[Close]

BLAST of Carg27856 vs. TAIR 10
Match: AT1G49130.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 107/322 (33.23%), Postives = 143/322 (44.41%), Query Frame = 0


Query: 28  AFLCQSCDSAVHSANPLARRHQRLRLNSPTSSNSKAPSPS----WVSGFTRKPRTPR--- 87
           AFLC  CD +VHSAN +A +H+R+ L +   SN      +    W SGF RK RTPR   
Sbjct: 38  AFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTLTSVWHSGFRRKARTPRSRY 97

Query: 88  -PPPRPKSDD----------LLSNPSFSLVPEADDATSHEDNEEDHLLYRVPTFDPFLPS 147
              P+ K DD           +       +PEA+D         D +   VP F+ F   
Sbjct: 98  EKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND---------DDMTSLVPEFEGFTEM 157

Query: 148 DDLDLADFATDLERQCFDMEGLGLVKVEDLHEQQE-------ADYCRAQHPFEAQMDLMR 207
                    T+   + F+ E      +EDL+   E       A+ C  Q+    + D   
Sbjct: 158 GFFLSNHNGTEETTKQFNFEE-EADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKD--- 217

Query: 208 EPFELIPVVDVKNERQEDCAEETEAESKTQRKGRVTLRLDCEAVIAAWGDDKSPWTTGER 267
             ++ +  V  K E  EDC E                RL+ E VIAAW   +SP     +
Sbjct: 218 --YDNVITVSEKTEEIEDCYENNARH-----------RLNYENVIAAWDKQESP--RDVK 277

Query: 268 PDLDPDQPWPHFMAFCEVRNGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIR 325
            +    Q  P  +    VR+                  REARV RYR+KR+ RLF KKIR
Sbjct: 278 NNTSSFQLVPPGIEEKRVRS-----------------EREARVWRYRDKRKNRLFEKKIR 314

The following BLAST results are available for this feature:

BLAST of Carg27856 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016788.1	2.5e-194	100.00	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAG6579277.1	6.8e-176	99.68	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022938378.1	1.6e-172	97.74	zinc finger protein CONSTANS-LIKE 16-like [Cucurbita moschata]	[more]
XP_023520465.1	1.8e-168	96.77	zinc finger protein CONSTANS-LIKE 16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973550.1	5.4e-165	94.84	zinc finger protein CONSTANS-LIKE 16-like [Cucurbita maxima]	[more]

BLAST of Carg27856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD0	1.4e-43	36.87	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q8LG76	9.5e-40	38.10	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	6.4e-36	38.64	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	1.8e-22	33.23	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
Q9LU68	4.0e-14	47.54	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]

BLAST of Carg27856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIQ3	7.5e-173	97.74	zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IBM5	2.6e-165	94.84	zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1I7W9	5.9e-101	62.40	zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E1S4	2.7e-98	61.56	zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0K964	2.3e-89	63.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039540 PE=3 SV=1	[more]

BLAST of Carg27856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25440.1	1.0e-44	36.87	B-box type zinc finger protein with CCT domain	[more]
AT1G68520.1	6.8e-41	38.10	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	4.5e-37	38.64	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.1	1.3e-23	33.23	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.2	1.3e-23	33.23	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 281..323 e-value: 7.3E-18 score: 64.4
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 281..323 score: 16.082605
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..115
None	No IPR available	PANTHER	PTHR31874:SF43	ZINC FINGER PROTEIN CONSTANS-LIKE 6	coord: 28..129
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 152..329
None	No IPR available	PANTHER	PTHR31874:SF43	ZINC FINGER PROTEIN CONSTANS-LIKE 6	coord: 152..329
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 28..129
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 28..53 e-value: 4.16203E-9 score: 49.6035

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27856-RA	Carg27856-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding