Carg27848 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27848
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr05: 8092419 .. 8094257 (+)
RNA-Seq Expression	Carg27848
Synteny	Carg27848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAAGTTGAACTTTTTTCCAAAGAAGTGTGTGAGATAATATTGGACAAGTATCCTGACCTCAAAACATTGAATAAACTCCACTCCAAGATTATTGTTAACGAACATCTTCGGATTGATCCAACTCTTGCTATTAAGCTTATGAGAGCTTACTCTGCTAATGGGGAAACAAGAGTTGCCCGATACATATTCGATAGAACTCTTGAAAAGAATGTTGTGTTTTTTAATGTCATGATAAGAAGTTATGTGAACAACAACTTGTATGTTGAAGCTCTTTCCATTTATCAAGTCATGTCAAGTTGTGCTTTTAATCCTGATCATTACACATTCCCTTGTGTTTTGAAGGCGTGTTCTGGATTGGATAATTTGAGGGTTGGGTTACAAGTTCATGATGCAATAGTGAAAGTTGGTCTTGACTCAAATTTGTTTATTGGTAATGCTTTGGTAGCCATGTATGGTAAATGTGGTCGTTTAAGGGAGGCTCGAAAAGTCCTTGATCAGATGCCAAATAGAGATGTGGTTTCTTGGAATTCAATGGTTGCTGGGTATGCACAAAGTGGGCAATTTGATGATGCTTTGGAAATTTGTAAGGAAATGGATTCTCTAAAGCTGAATCATGATGCTGGTACAATGGCTAGCCTTTTGCCTGTCGTGAAAGCTGAATCATCACCGGAAAATGTTCGGTATGTCCATAACATGTTTGAGAAGATGGCTAGGAAGAGTTTGGTTTCATGGAACGTGATGATAGCAATATATGTGAATAATTCTATGCCAAATGAAGCCGTTAGCTTATTTTTACAAATGGAGGAATGCGGGATGAAGCCCGATGCAGTTACAATTGCGAGCCTTCTTCCTGCTTGTGGGGACCTTTCAGCTTTATTTCTAGGAAGGCGTCTTCATAAATATATCGAGAAGGACAATCTTTTGCCGAATTTGTTATTGGAGAATGCATTGCTTGACATGTATGCTAAATGTGGCTGTTTAGAAGAAGCTAGGGATGTATTTGATAAGATGAAGTTGCGAGATGTCGTGTCATGGACATCGATGATGTCTGCATATGGAAAAAGCGGTCAAGGCTATGATGCTGTGGCACTCTTTGTGAAAATGCTAGACTCGGGTCTGAACCCGGATTCCATTTCTTTTGTTTCTGTACTCTCTGCTTGTAGCCATGCAGGATTCTTGGAGCAGGGGCGTCGTTACTTCCATATCATGACTGAACAATATAGGATAGTTCCTAGGATAGAACACTTCGCATGCATGGTAGATCTATTCGGACGAGCTGGTGAAGTGGAAGAAGCATATAGTTTCATCAAGCAGATGCCAATGGAGCCAAATGAAAGAGTTTGGGGTGCACTTTTGAGTGCTTGTCGAGTGCACTCGAAGATGGATATCGGACTCATAGCTGCCGATTGTCTTTTTCAATTGGCCCCTAAGCAATCGGGCTACTATGTCTTGTTATCGAACATTTATGCAAAGGCCGGTATGTGGAAAGACGTAATGAATGTTCGAAACGCAATGAAGAAAATAGGAATTAAGAAAGTGCCGGGCATTAGTAATGTCGAGCTTAAGGGTCAAGTTCATACATTTCTTGCCGGTGATCAATATCATCCACAGGCAAAGAGTATATATGAAGAGCTGGATTTATTAGTTGGGAAGATGAAGGAGTTAGGCTACATTCCTCAAACTGAGTCGGCTCTCCACGACGTCGAGGTTGAGGATAAAGAATGTCATCTAGCTATTCATAGTGAAAAGTTGGCGATTGTCTTTGCTATTTTGAACACGAAGCATGGTACACCGATTAGAATTACGAAGAACCTTCGTGTTTGTGGGGATTGCCAT

mRNA sequence

TCTAAAGTTGAACTTTTTTCCAAAGAAGTGTGTGAGATAATATTGGACAAGTATCCTGACCTCAAAACATTGAATAAACTCCACTCCAAGATTATTGTTAACGAACATCTTCGGATTGATCCAACTCTTGCTATTAAGCTTATGAGAGCTTACTCTGCTAATGGGGAAACAAGAGTTGCCCGATACATATTCGATAGAACTCTTGAAAAGAATGTTGTGTTTTTTAATGTCATGATAAGAAGTTATGTGAACAACAACTTGTATGTTGAAGCTCTTTCCATTTATCAAGTCATGTCAAGTTGTGCTTTTAATCCTGATCATTACACATTCCCTTGTGTTTTGAAGGCGTGTTCTGGATTGGATAATTTGAGGGTTGGGTTACAAGTTCATGATGCAATAGTGAAAGTTGGTCTTGACTCAAATTTGTTTATTGGTAATGCTTTGGTAGCCATGTATGGTAAATGTGGTCGTTTAAGGGAGGCTCGAAAAGTCCTTGATCAGATGCCAAATAGAGATGTGGTTTCTTGGAATTCAATGGTTGCTGGGTATGCACAAAGTGGGCAATTTGATGATGCTTTGGAAATTTGTAAGGAAATGGATTCTCTAAAGCTGAATCATGATGCTGGTACAATGGCTAGCCTTTTGCCTGTCGTGAAAGCTGAATCATCACCGGAAAATGTTCGGTATGTCCATAACATGTTTGAGAAGATGGCTAGGAAGAGTTTGGTTTCATGGAACGTGATGATAGCAATATATGTGAATAATTCTATGCCAAATGAAGCCGTTAGCTTATTTTTACAAATGGAGGAATGCGGGATGAAGCCCGATGCAGTTACAATTGCGAGCCTTCTTCCTGCTTGTGGGGACCTTTCAGCTTTATTTCTAGGAAGGCGTCTTCATAAATATATCGAGAAGGACAATCTTTTGCCGAATTTGTTATTGGAGAATGCATTGCTTGACATGTATGCTAAATGTGGCTGTTTAGAAGAAGCTAGGGATGTATTTGATAAGATGAAGTTGCGAGATGTCGTGTCATGGACATCGATGATGTCTGCATATGGAAAAAGCGGTCAAGGCTATGATGCTGTGGCACTCTTTGTGAAAATGCTAGACTCGGGTCTGAACCCGGATTCCATTTCTTTTGTTTCTGTACTCTCTGCTTGTAGCCATGCAGGATTCTTGGAGCAGGGGCGTCGTTACTTCCATATCATGACTGAACAATATAGGATAGTTCCTAGGATAGAACACTTCGCATGCATGGTAGATCTATTCGGACGAGCTGGTGAAGTGGAAGAAGCATATAGTTTCATCAAGCAGATGCCAATGGAGCCAAATGAAAGAGTTTGGGGTGCACTTTTGAGTGCTTGTCGAGTGCACTCGAAGATGGATATCGGACTCATAGCTGCCGATTGTCTTTTTCAATTGGCCCCTAAGCAATCGGGCTACTATGTCTTGTTATCGAACATTTATGCAAAGGCCGGTATGTGGAAAGACGTAATGAATGTTCGAAACGCAATGAAGAAAATAGGAATTAAGAAAGTGCCGGGCATTAGTAATGTCGAGCTTAAGGGTCAAGTTCATACATTTCTTGCCGGTGATCAATATCATCCACAGGCAAAGAGTATATATGAAGAGCTGGATTTATTAGTTGGGAAGATGAAGGAGTTAGGCTACATTCCTCAAACTGAGTCGGCTCTCCACGACGTCGAGGTTGAGGATAAAGAATGTCATCTAGCTATTCATAGTGAAAAGTTGGCGATTGTCTTTGCTATTTTGAACACGAAGCATGGTACACCGATTAGAATTACGAAGAACCTTCGTGTTTGTGGGGATTGCCAT

Coding sequence (CDS)

TCTAAAGTTGAACTTTTTTCCAAAGAAGTGTGTGAGATAATATTGGACAAGTATCCTGACCTCAAAACATTGAATAAACTCCACTCCAAGATTATTGTTAACGAACATCTTCGGATTGATCCAACTCTTGCTATTAAGCTTATGAGAGCTTACTCTGCTAATGGGGAAACAAGAGTTGCCCGATACATATTCGATAGAACTCTTGAAAAGAATGTTGTGTTTTTTAATGTCATGATAAGAAGTTATGTGAACAACAACTTGTATGTTGAAGCTCTTTCCATTTATCAAGTCATGTCAAGTTGTGCTTTTAATCCTGATCATTACACATTCCCTTGTGTTTTGAAGGCGTGTTCTGGATTGGATAATTTGAGGGTTGGGTTACAAGTTCATGATGCAATAGTGAAAGTTGGTCTTGACTCAAATTTGTTTATTGGTAATGCTTTGGTAGCCATGTATGGTAAATGTGGTCGTTTAAGGGAGGCTCGAAAAGTCCTTGATCAGATGCCAAATAGAGATGTGGTTTCTTGGAATTCAATGGTTGCTGGGTATGCACAAAGTGGGCAATTTGATGATGCTTTGGAAATTTGTAAGGAAATGGATTCTCTAAAGCTGAATCATGATGCTGGTACAATGGCTAGCCTTTTGCCTGTCGTGAAAGCTGAATCATCACCGGAAAATGTTCGGTATGTCCATAACATGTTTGAGAAGATGGCTAGGAAGAGTTTGGTTTCATGGAACGTGATGATAGCAATATATGTGAATAATTCTATGCCAAATGAAGCCGTTAGCTTATTTTTACAAATGGAGGAATGCGGGATGAAGCCCGATGCAGTTACAATTGCGAGCCTTCTTCCTGCTTGTGGGGACCTTTCAGCTTTATTTCTAGGAAGGCGTCTTCATAAATATATCGAGAAGGACAATCTTTTGCCGAATTTGTTATTGGAGAATGCATTGCTTGACATGTATGCTAAATGTGGCTGTTTAGAAGAAGCTAGGGATGTATTTGATAAGATGAAGTTGCGAGATGTCGTGTCATGGACATCGATGATGTCTGCATATGGAAAAAGCGGTCAAGGCTATGATGCTGTGGCACTCTTTGTGAAAATGCTAGACTCGGGTCTGAACCCGGATTCCATTTCTTTTGTTTCTGTACTCTCTGCTTGTAGCCATGCAGGATTCTTGGAGCAGGGGCGTCGTTACTTCCATATCATGACTGAACAATATAGGATAGTTCCTAGGATAGAACACTTCGCATGCATGGTAGATCTATTCGGACGAGCTGGTGAAGTGGAAGAAGCATATAGTTTCATCAAGCAGATGCCAATGGAGCCAAATGAAAGAGTTTGGGGTGCACTTTTGAGTGCTTGTCGAGTGCACTCGAAGATGGATATCGGACTCATAGCTGCCGATTGTCTTTTTCAATTGGCCCCTAAGCAATCGGGCTACTATGTCTTGTTATCGAACATTTATGCAAAGGCCGGTATGTGGAAAGACGTAATGAATGTTCGAAACGCAATGAAGAAAATAGGAATTAAGAAAGTGCCGGGCATTAGTAATGTCGAGCTTAAGGGTCAAGTTCATACATTTCTTGCCGGTGATCAATATCATCCACAGGCAAAGAGTATATATGAAGAGCTGGATTTATTAGTTGGGAAGATGAAGGAGTTAGGCTACATTCCTCAAACTGAGTCGGCTCTCCACGACGTCGAGGTTGAGGATAAAGAATGTCATCTAGCTATTCATAGTGAAAAGTTGGCGATTGTCTTTGCTATTTTGAACACGAAGCATGGTACACCGATTAGAATTACGAAGAACCTTCGTGTTTGTGGGGATTGCCAT

Protein sequence

SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH

Homology

[Close]

BLAST of Carg27848 vs. NCBI nr
Match: KAG7029999.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA
Sbjct: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL
Sbjct: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV
Sbjct: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM
Sbjct: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 601 RITKNLRVCGDCH 613

[Close]

BLAST of Carg27848 vs. NCBI nr
Match: XP_022946769.1 (putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moschata] >XP_022946770.1 putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moschata])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 610/613 (99.51%), Postives = 610/613 (99.51%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA
Sbjct: 29  SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAF PDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFYPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQGRRYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGRRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 628

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 629 RITKNLRVCGDCH 641

[Close]

BLAST of Carg27848 vs. NCBI nr
Match: XP_023546028.1 (putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 607/613 (99.02%), Postives = 607/613 (99.02%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANG TRVA
Sbjct: 29  SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGVTRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLF QMEECGMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFSQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMS YGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSVYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQGRRYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGRRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAAD LFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADSLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 628

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 629 RITKNLRVCGDCH 641

[Close]

BLAST of Carg27848 vs. NCBI nr
Match: XP_022999640.1 (putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucurbita maxima] >XP_022999641.1 putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 605/613 (98.69%), Postives = 606/613 (98.86%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILD+YPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANG TRVA
Sbjct: 29  SKVELFSKEVCEIILDQYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGVTRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCG LREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGCLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEERGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQG RYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGSRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVR AMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 628

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 629 RITKNLRVCGDCH 641

[Close]

BLAST of Carg27848 vs. NCBI nr
Match: KAG6599061.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1191.4 bits (3081), Expect = 0.0e+00
Identity = 594/596 (99.66%), Postives = 594/596 (99.66%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA
Sbjct: 29  SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQGRRYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGRRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH 597
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH 624

[Close]

BLAST of Carg27848 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 2.7e-234
Identity = 394/605 (65.12%), Postives = 482/605 (79.67%), Query Frame = 0


Query: 14  ILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVV 73
           +LD YPD++TL  +HS+II+ E LR + +L +KLMRAY++  +   AR +FD   E+NV+
Sbjct: 48  VLDTYPDIRTLRTVHSRIIL-EDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVI 107

Query: 74  FFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI 133
             NVMIRSYVNN  Y E + ++  M  C   PDHYTFPCVLKACS    + +G ++H + 
Sbjct: 108 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 167

Query: 134 VKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDAL 193
            KVGL S LF+GN LV+MYGKCG L EAR VLD+M  RDVVSWNS+V GYAQ+ +FDDAL
Sbjct: 168 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 227

Query: 194 EICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYV 253
           E+C+EM+S+K++HDAGTMASLLP V + ++ ENV YV +MF KM +KSLVSWNVMI +Y+
Sbjct: 228 EVCREMESVKISHDAGTMASLLPAV-SNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 287

Query: 254 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLL 313
            N+MP EAV L+ +ME  G +PDAV+I S+LPACGD SAL LG+++H YIE+  L+PNLL
Sbjct: 288 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 347

Query: 314 LENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSG 373
           LENAL+DMYAKCGCLE+ARDVF+ MK RDVVSWT+M+SAYG SG+G DAVALF K+ DSG
Sbjct: 348 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 407

Query: 374 LNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEA 433
           L PDSI+FV+ L+ACSHAG LE+GR  F +MT+ Y+I PR+EH ACMVDL GRAG+V+EA
Sbjct: 408 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 467

Query: 434 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKA 493
           Y FI+ M MEPNERVWGALL ACRVHS  DIGL+AAD LFQLAP+QSGYYVLLSNIYAKA
Sbjct: 468 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 527

Query: 494 GMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKM 553
           G W++V N+RN MK  G+KK PG SNVE+   +HTFL GD+ HPQ+  IY ELD+LV KM
Sbjct: 528 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 587

Query: 554 KELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH-----GTPIRITKNLRV 613
           KELGY+P +ESALHDVE EDKE HLA+HSEKLAIVFA++NTK         IRITKNLR+
Sbjct: 588 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 647

[Close]

BLAST of Carg27848 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.5e-123
Identity = 225/634 (35.49%), Postives = 377/634 (59.46%), Query Frame = 0


Query: 14  ILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVV 73
           ++D       L ++H++++V   L+    L  KL+ A S+ G+   AR +FD      + 
Sbjct: 27  LIDSATHKAQLKQIHARLLV-LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 86

Query: 74  FFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI 133
            +N +IR Y  NN + +AL +Y  M     +PD +TFP +LKACSGL +L++G  VH  +
Sbjct: 87  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 146

Query: 134 VKVGLDSNLFIGNALVAMYGKCGRLREARKVLD--QMPNRDVVSWNSMVAGYAQSGQFDD 193
            ++G D+++F+ N L+A+Y KC RL  AR V +   +P R +VSW ++V+ YAQ+G+  +
Sbjct: 147 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 206

Query: 194 ALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHN------------------- 253
           ALEI  +M  + +  D   + S+L         +  R +H                    
Sbjct: 207 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 266

Query: 254 -------------MFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 313
                        +F+KM   +L+ WN MI+ Y  N    EA+ +F +M    ++PD ++
Sbjct: 267 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 326

Query: 314 IASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMK 373
           I S + AC  + +L   R +++Y+ + +   ++ + +AL+DM+AKCG +E AR VFD+  
Sbjct: 327 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 386

Query: 374 LRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRR 433
            RDVV W++M+  YG  G+  +A++L+  M   G++P+ ++F+ +L AC+H+G + +G  
Sbjct: 387 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 446

Query: 434 YFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 493
           +F+ M + ++I P+ +H+AC++DL GRAG +++AY  IK MP++P   VWGALLSAC+ H
Sbjct: 447 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 506

Query: 494 SKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISN 553
             +++G  AA  LF + P  +G+YV LSN+YA A +W  V  VR  MK+ G+ K  G S 
Sbjct: 507 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 566

Query: 554 VELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLA 613
           VE++G++  F  GD+ HP+ + I  +++ +  ++KE G++   +++LHD+  E+ E  L 
Sbjct: 567 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 626

[Close]

BLAST of Carg27848 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-121
Identity = 222/602 (36.88%), Postives = 343/602 (56.98%), Query Frame = 0


Query: 43  LAIKLMRAYSANGETRVARYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQ--VMSS 102
           L   +++ Y        AR +FDR  EK+ + +N MI  Y  N +YVE++ +++  +  S
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215

Query: 103 CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLRE 162
           C    D  T   +L A + L  LR+G+Q+H    K G  S+ ++    +++Y KCG+++ 
Sbjct: 216 CT-RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 275

Query: 163 ARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV--- 222
              +  +    D+V++N+M+ GY  +G+ + +L + KE+        + T+ SL+PV   
Sbjct: 276 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 335

Query: 223 --------------------------VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAI 282
                                         S    +     +F++   KSL SWN MI+ 
Sbjct: 336 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 395

Query: 283 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPN 342
           Y  N +  +A+SLF +M++    P+ VTI  +L AC  L AL LG+ +H  +   +   +
Sbjct: 396 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 455

Query: 343 LLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLD 402
           + +  AL+ MYAKCG + EAR +FD M  ++ V+W +M+S YG  GQG +A+ +F +ML+
Sbjct: 456 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 515

Query: 403 SGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVE 462
           SG+ P  ++F+ VL ACSHAG +++G   F+ M  +Y   P ++H+ACMVD+ GRAG ++
Sbjct: 516 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 575

Query: 463 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYA 522
            A  FI+ M +EP   VW  LL ACR+H   ++    ++ LF+L P   GY+VLLSNI++
Sbjct: 576 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 635

Query: 523 KAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVG 582
               +     VR   KK  + K PG + +E+    H F +GDQ HPQ K IYE+L+ L G
Sbjct: 636 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 695

Query: 583 KMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGD 614
           KM+E GY P+TE ALHDVE E++E  + +HSE+LAI F ++ T+ GT IRI KNLRVC D
Sbjct: 696 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 755

[Close]

BLAST of Carg27848 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 9.0e-121
Identity = 233/656 (35.52%), Postives = 372/656 (56.71%), Query Frame = 0


Query: 26  KLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVVFFNVMIRSYVNN 85
           +LH++ I  + L    T A  ++  Y+       A  +F       V+ +  +IR + + 
Sbjct: 26  QLHAQFIRTQSL--SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 85

Query: 86  NLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIG 145
           +L+ +AL+ +  M +    PDH  FP VLK+C+ + +LR G  VH  IV++G+D +L+ G
Sbjct: 86  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 145

Query: 146 NALVAMYGKC------------------------------------GRLREARKVLDQMP 205
           NAL+ MY K                                       +   R+V + MP
Sbjct: 146 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 205

Query: 206 NRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRY 265
            +DVVS+N+++AGYAQSG ++DAL + +EM +  L  D+ T++S+LP+          + 
Sbjct: 206 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 265

Query: 266 VH-------------------NMFEKMAR-------------KSLVSWNVMIAIYVNNSM 325
           +H                   +M+ K AR             +  +SWN ++A YV N  
Sbjct: 266 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 325

Query: 326 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENA 385
            NEA+ LF QM    +KP AV  +S++PAC  L+ L LG++LH Y+ +     N+ + +A
Sbjct: 326 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 385

Query: 386 LLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPD 445
           L+DMY+KCG ++ AR +FD+M + D VSWT+++  +   G G++AV+LF +M   G+ P+
Sbjct: 386 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 445

Query: 446 SISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFI 505
            ++FV+VL+ACSH G +++   YF+ MT+ Y +   +EH+A + DL GRAG++EEAY+FI
Sbjct: 446 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 505

Query: 506 KQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWK 565
            +M +EP   VW  LLS+C VH  +++    A+ +F +  +  G YVL+ N+YA  G WK
Sbjct: 506 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 565

Query: 566 DVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELG 614
           ++  +R  M+K G++K P  S +E+K + H F++GD+ HP    I E L  ++ +M++ G
Sbjct: 566 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 625

[Close]

BLAST of Carg27848 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.2e-120
Identity = 228/593 (38.45%), Postives = 349/593 (58.85%), Query Frame = 0


Query: 63  IFDRTLEKNVVF-FNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLD 122
           +F+R ++K  VF +N +I     +    EAL  +  M   +  P   +FPC +KACS L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 123 NLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVA 182
           ++  G Q H      G  S++F+ +AL+ MY  CG+L +ARKV D++P R++VSW SM+ 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 183 GYAQSGQFDDALEICKE-------------MDS--------------------------L 242
           GY  +G   DA+ + K+             +DS                          +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 243 KLNHDAG-TMASLLPVVKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEA 302
           K   D G ++ + L    A+     V     +F+++  K  VS+N ++++Y  + M NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 303 VSLFLQMEECGMKP-DAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLD 362
             +F ++ +  +   +A+T++++L A     AL +G+ +H  + +  L  ++++  +++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 363 MYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPDSIS 422
           MY KCG +E AR  FD+MK ++V SWT+M++ YG  G    A+ LF  M+DSG+ P+ I+
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 423 FVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 482
           FVSVL+ACSHAG   +G R+F+ M  ++ + P +EH+ CMVDL GRAG +++AY  I++M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 483 PMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVM 542
            M+P+  +W +LL+ACR+H  +++  I+   LF+L     GYY+LLS+IYA AG WKDV 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 543 NVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIP 602
            VR  MK  G+ K PG S +EL G+VH FL GD+ HPQ + IYE L  L  K+ E GY+ 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 603 QTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH 614
            T S  HDV+ E+KE  L +HSEKLAI F I+NT  G+ + + KNLRVC DCH
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCH 623

[Close]

BLAST of Carg27848 vs. ExPASy TrEMBL
Match: A0A6J1G4Z8 (putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucurbita moschata OX=3662 GN=LOC111450738 PE=3 SV=1)

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 610/613 (99.51%), Postives = 610/613 (99.51%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA
Sbjct: 29  SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAF PDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFYPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQGRRYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGRRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 628

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 629 RITKNLRVCGDCH 641

[Close]

BLAST of Carg27848 vs. ExPASy TrEMBL
Match: A0A6J1KDN5 (putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493940 PE=3 SV=1)

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 605/613 (98.69%), Postives = 606/613 (98.86%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           SKVELFSKEVCEIILD+YPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANG TRVA
Sbjct: 29  SKVELFSKEVCEIILDQYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGVTRVA 88

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL
Sbjct: 89  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 148

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCG LREARKVLDQMPNRDVVSWNSMV
Sbjct: 149 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGCLREARKVLDQMPNRDVVSWNSMV 208

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK
Sbjct: 209 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 268

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMIAIYVNNSMPNEAVSLFLQMEE GMKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 269 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEERGMKPDAVTIASLLPACGDLSALFLGRRLH 328

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY
Sbjct: 329 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 388

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           DAVALF KMLDSGLNPDSISFVSVLSACSHAG LEQG RYFHIMTEQYRIVPRIEHFACM
Sbjct: 389 DAVALFAKMLDSGLNPDSISFVSVLSACSHAGLLEQGSRYFHIMTEQYRIVPRIEHFACM 448

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS
Sbjct: 449 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 508

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDVMNVR AMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK
Sbjct: 509 GYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 568

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
           SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 569 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 628

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 629 RITKNLRVCGDCH 641

[Close]

BLAST of Carg27848 vs. ExPASy TrEMBL
Match: A0A0A0KE24 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404230 PE=3 SV=1)

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 560/612 (91.50%), Postives = 584/612 (95.42%), Query Frame = 0


Query: 2   KVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVAR 61
           KVE+FSKE CE+ILD+YP +KTLNKLHSKI++NEHLRIDPTLAIKLMRAYSA GET VAR
Sbjct: 32  KVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVAR 91

Query: 62  YIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLD 121
           YIFDR+LEKNVVFFNVMIRSYVNNNLYVEALSI+QVM SCAFNPDHYTFPCVLKACSGLD
Sbjct: 92  YIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151

Query: 122 NLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVA 181
           NLRVGLQVHDAIVKVGLD+NLFIGNALVAMYGKCG LREARKVLDQMP RDVVSWNSMVA
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211

Query: 182 GYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARKS 241
           GYAQSGQFDDALEICKEMDSL LNHDAGTMASL PVV   +S ENV+Y+HNMFE+M +K+
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVV-CYTSLENVQYIHNMFERMTKKN 271

Query: 242 LVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 301
           L+SWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK
Sbjct: 272 LISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 331

Query: 302 YIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYD 361
           YIEK NL PNLLLENALLDMYAKCGCLEEARDVFDKM+LRDVVSWTSMMSAYG+SGQGYD
Sbjct: 332 YIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYD 391

Query: 362 AVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMV 421
           AVALF KMLDSG NPDSI+FVSVLSACSH G L+QGR YF +MTEQY IVPRIEHFACMV
Sbjct: 392 AVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMV 451

Query: 422 DLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSG 481
           DLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL+AAD LFQLAPKQSG
Sbjct: 452 DLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSG 511

Query: 482 YYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKS 541
           YYVLLSNIYAKAGMWKDVMNVR AMKKIGIKKVPGISNVEL GQVHTFLAGDQYHPQAK+
Sbjct: 512 YYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKN 571

Query: 542 IYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIR 601
           IY ELD+LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTK GTPIR
Sbjct: 572 IYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIR 631

Query: 602 ITKNLRVCGDCH 614
           ITKNLRVCGDCH
Sbjct: 632 ITKNLRVCGDCH 642

[Close]

BLAST of Carg27848 vs. ExPASy TrEMBL
Match: A0A1S3C3E6 (putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucumis melo OX=3656 GN=LOC103496411 PE=3 SV=1)

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 560/612 (91.50%), Postives = 583/612 (95.26%), Query Frame = 0


Query: 2   KVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVAR 61
           KVE+FSKEVCEIILD+YP +KTLNKLHSKI+VNEHLRIDPTLAIKLMRAYSA GET VAR
Sbjct: 32  KVEVFSKEVCEIILDQYPGIKTLNKLHSKIVVNEHLRIDPTLAIKLMRAYSACGETSVAR 91

Query: 62  YIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLD 121
           YIFDR+LEKNVVFFNVMIRSYVNNNLY EALSI+QVM SCAFNPDHYTFPCVLKACSGLD
Sbjct: 92  YIFDRSLEKNVVFFNVMIRSYVNNNLYFEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151

Query: 122 NLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVA 181
           NLRVGLQVHDAI+KVGLDSNLFIGNALVAMYGKCG LREARKVLDQMP RDVVSWNSMVA
Sbjct: 152 NLRVGLQVHDAILKVGLDSNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211

Query: 182 GYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARKS 241
           GYAQSGQFDDALEICKEMDSL LNHDAGTMASL PVV   +S ENV+Y+H+MFE+MA+K+
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVV-CYTSLENVQYIHSMFERMAKKN 271

Query: 242 LVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 301
           LVSWNVMIAIYVNNSMPNEAV LFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK
Sbjct: 272 LVSWNVMIAIYVNNSMPNEAVGLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 331

Query: 302 YIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYD 361
           YIEK NL PNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYG+SGQGYD
Sbjct: 332 YIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGRSGQGYD 391

Query: 362 AVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMV 421
           AVALF KMLDSG  PDSI+FVSVLSACSH G L+QGR YF +MTEQY IVPRIEHFACMV
Sbjct: 392 AVALFAKMLDSGQIPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMV 451

Query: 422 DLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSG 481
           DLFGRAGEVEEAYSF+KQMPMEPNERVWGALLSACRVH KMDIGL+AAD LFQLAPKQSG
Sbjct: 452 DLFGRAGEVEEAYSFVKQMPMEPNERVWGALLSACRVHLKMDIGLVAADRLFQLAPKQSG 511

Query: 482 YYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKS 541
           YYVLLSNIYAKAGMWKDVMNVR AMKK+GIKKVPGISNVEL GQVHTFLAGDQYHPQAK+
Sbjct: 512 YYVLLSNIYAKAGMWKDVMNVRYAMKKMGIKKVPGISNVELNGQVHTFLAGDQYHPQAKN 571

Query: 542 IYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIR 601
           IYEELD+LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTK GTPIR
Sbjct: 572 IYEELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIR 631

Query: 602 ITKNLRVCGDCH 614
           ITKNLRVCGDCH
Sbjct: 632 ITKNLRVCGDCH 642

[Close]

BLAST of Carg27848 vs. ExPASy TrEMBL
Match: A0A6J1DSL6 (putative pentatricopeptide repeat-containing protein At3g49142 OS=Momordica charantia OX=3673 GN=LOC111023932 PE=3 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 548/613 (89.40%), Postives = 578/613 (94.29%), Query Frame = 0


Query: 1   SKVELFSKEVCEIILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVA 60
           S++EL +KE+CEIILD+YPD+KTL+KLHSKI+VNEHL++DPTLAIKLMRAYSA G+TRVA
Sbjct: 31  SRIELVAKEMCEIILDRYPDIKTLSKLHSKIVVNEHLKVDPTLAIKLMRAYSACGKTRVA 90

Query: 61  RYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGL 120
           RYIFD T EKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSC FNPDHYTFPCVLKACSGL
Sbjct: 91  RYIFDGTFEKNVVFFNVMIRSYVNNNLYVEALSIYQVMSSCGFNPDHYTFPCVLKACSGL 150

Query: 121 DNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMV 180
           DNLRVGLQVHDAIVKVGLDSN+FIGNALVAMYGKCG LREARKVLDQMPNRDVVSWNSMV
Sbjct: 151 DNLRVGLQVHDAIVKVGLDSNVFIGNALVAMYGKCGCLREARKVLDQMPNRDVVSWNSMV 210

Query: 181 AGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARK 240
           AGYAQ GQFDDALEICKEMD+L LNHDAGTMASLLP V + +S ENV+YVH MFEKM RK
Sbjct: 211 AGYAQRGQFDDALEICKEMDTLNLNHDAGTMASLLPAV-SNTSSENVQYVHKMFEKMDRK 270

Query: 241 SLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH 300
           SLVSWNVMI IYVNNSMPNEAV+LF QMEEC MKPDAVTIASLLPACGDLSALFLGRRLH
Sbjct: 271 SLVSWNVMIGIYVNNSMPNEAVNLFSQMEECRMKPDAVTIASLLPACGDLSALFLGRRLH 330

Query: 301 KYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGY 360
           +YIEKDNL PNLLLENALLDMYAKCGCLEEARDVF+KMK RDVVSWTSMMSAYG SGQG+
Sbjct: 331 EYIEKDNLRPNLLLENALLDMYAKCGCLEEARDVFNKMKFRDVVSWTSMMSAYGVSGQGH 390

Query: 361 DAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACM 420
           D V LF KM +SGLNPDSI+FVSVLSACSHAG L+QGR YFH+MTEQY IVPRIEHFACM
Sbjct: 391 DVVVLFAKMQESGLNPDSIAFVSVLSACSHAGLLDQGRHYFHVMTEQYGIVPRIEHFACM 450

Query: 421 VDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQS 480
           VDL GRAGEVEEAY+FIK MPMEPNERVWGALLSACRVH KMDIGL+AA+CLFQLAPKQS
Sbjct: 451 VDLLGRAGEVEEAYAFIKHMPMEPNERVWGALLSACRVHLKMDIGLLAANCLFQLAPKQS 510

Query: 481 GYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAK 540
           GYYVLLSNIYAKAGMWKDV NVR AMK  GIKKVPGISNVELKGQVHTFLAGDQYHPQ+K
Sbjct: 511 GYYVLLSNIYAKAGMWKDVANVRYAMKNKGIKKVPGISNVELKGQVHTFLAGDQYHPQSK 570

Query: 541 SIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 600
            IYEELD+LVGKMKELGYIP+TESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI
Sbjct: 571 KIYEELDVLVGKMKELGYIPETESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPI 630

Query: 601 RITKNLRVCGDCH 614
           RITKNLRVCGDCH
Sbjct: 631 RITKNLRVCGDCH 642

[Close]

BLAST of Carg27848 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 812.8 bits (2098), Expect = 1.9e-235
Identity = 394/605 (65.12%), Postives = 482/605 (79.67%), Query Frame = 0


Query: 14  ILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVV 73
           +LD YPD++TL  +HS+II+ E LR + +L +KLMRAY++  +   AR +FD   E+NV+
Sbjct: 48  VLDTYPDIRTLRTVHSRIIL-EDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVI 107

Query: 74  FFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI 133
             NVMIRSYVNN  Y E + ++  M  C   PDHYTFPCVLKACS    + +G ++H + 
Sbjct: 108 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 167

Query: 134 VKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDAL 193
            KVGL S LF+GN LV+MYGKCG L EAR VLD+M  RDVVSWNS+V GYAQ+ +FDDAL
Sbjct: 168 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 227

Query: 194 EICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYV 253
           E+C+EM+S+K++HDAGTMASLLP V + ++ ENV YV +MF KM +KSLVSWNVMI +Y+
Sbjct: 228 EVCREMESVKISHDAGTMASLLPAV-SNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 287

Query: 254 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLL 313
            N+MP EAV L+ +ME  G +PDAV+I S+LPACGD SAL LG+++H YIE+  L+PNLL
Sbjct: 288 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 347

Query: 314 LENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSG 373
           LENAL+DMYAKCGCLE+ARDVF+ MK RDVVSWT+M+SAYG SG+G DAVALF K+ DSG
Sbjct: 348 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 407

Query: 374 LNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEA 433
           L PDSI+FV+ L+ACSHAG LE+GR  F +MT+ Y+I PR+EH ACMVDL GRAG+V+EA
Sbjct: 408 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 467

Query: 434 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKA 493
           Y FI+ M MEPNERVWGALL ACRVHS  DIGL+AAD LFQLAP+QSGYYVLLSNIYAKA
Sbjct: 468 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 527

Query: 494 GMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKM 553
           G W++V N+RN MK  G+KK PG SNVE+   +HTFL GD+ HPQ+  IY ELD+LV KM
Sbjct: 528 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 587

Query: 554 KELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKH-----GTPIRITKNLRV 613
           KELGY+P +ESALHDVE EDKE HLA+HSEKLAIVFA++NTK         IRITKNLR+
Sbjct: 588 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 647

[Close]

BLAST of Carg27848 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-124
Identity = 225/634 (35.49%), Postives = 377/634 (59.46%), Query Frame = 0


Query: 14  ILDKYPDLKTLNKLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVV 73
           ++D       L ++H++++V   L+    L  KL+ A S+ G+   AR +FD      + 
Sbjct: 27  LIDSATHKAQLKQIHARLLV-LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 86

Query: 74  FFNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI 133
            +N +IR Y  NN + +AL +Y  M     +PD +TFP +LKACSGL +L++G  VH  +
Sbjct: 87  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 146

Query: 134 VKVGLDSNLFIGNALVAMYGKCGRLREARKVLD--QMPNRDVVSWNSMVAGYAQSGQFDD 193
            ++G D+++F+ N L+A+Y KC RL  AR V +   +P R +VSW ++V+ YAQ+G+  +
Sbjct: 147 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 206

Query: 194 ALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRYVHN------------------- 253
           ALEI  +M  + +  D   + S+L         +  R +H                    
Sbjct: 207 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 266

Query: 254 -------------MFEKMARKSLVSWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 313
                        +F+KM   +L+ WN MI+ Y  N    EA+ +F +M    ++PD ++
Sbjct: 267 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 326

Query: 314 IASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLDMYAKCGCLEEARDVFDKMK 373
           I S + AC  + +L   R +++Y+ + +   ++ + +AL+DM+AKCG +E AR VFD+  
Sbjct: 327 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 386

Query: 374 LRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPDSISFVSVLSACSHAGFLEQGRR 433
            RDVV W++M+  YG  G+  +A++L+  M   G++P+ ++F+ +L AC+H+G + +G  
Sbjct: 387 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 446

Query: 434 YFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 493
           +F+ M + ++I P+ +H+AC++DL GRAG +++AY  IK MP++P   VWGALLSAC+ H
Sbjct: 447 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 506

Query: 494 SKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRNAMKKIGIKKVPGISN 553
             +++G  AA  LF + P  +G+YV LSN+YA A +W  V  VR  MK+ G+ K  G S 
Sbjct: 507 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 566

Query: 554 VELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIPQTESALHDVEVEDKECHLA 613
           VE++G++  F  GD+ HP+ + I  +++ +  ++KE G++   +++LHD+  E+ E  L 
Sbjct: 567 VEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLC 626

[Close]

BLAST of Carg27848 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 438.3 bits (1126), Expect = 9.9e-123
Identity = 222/602 (36.88%), Postives = 343/602 (56.98%), Query Frame = 0


Query: 43  LAIKLMRAYSANGETRVARYIFDRTLEKNVVFFNVMIRSYVNNNLYVEALSIYQ--VMSS 102
           L   +++ Y        AR +FDR  EK+ + +N MI  Y  N +YVE++ +++  +  S
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215

Query: 103 CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLRE 162
           C    D  T   +L A + L  LR+G+Q+H    K G  S+ ++    +++Y KCG+++ 
Sbjct: 216 CT-RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 275

Query: 163 ARKVLDQMPNRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPV--- 222
              +  +    D+V++N+M+ GY  +G+ + +L + KE+        + T+ SL+PV   
Sbjct: 276 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 335

Query: 223 --------------------------VKAESSPENVRYVHNMFEKMARKSLVSWNVMIAI 282
                                         S    +     +F++   KSL SWN MI+ 
Sbjct: 336 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 395

Query: 283 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPN 342
           Y  N +  +A+SLF +M++    P+ VTI  +L AC  L AL LG+ +H  +   +   +
Sbjct: 396 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 455

Query: 343 LLLENALLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLD 402
           + +  AL+ MYAKCG + EAR +FD M  ++ V+W +M+S YG  GQG +A+ +F +ML+
Sbjct: 456 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 515

Query: 403 SGLNPDSISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVE 462
           SG+ P  ++F+ VL ACSHAG +++G   F+ M  +Y   P ++H+ACMVD+ GRAG ++
Sbjct: 516 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 575

Query: 463 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYA 522
            A  FI+ M +EP   VW  LL ACR+H   ++    ++ LF+L P   GY+VLLSNI++
Sbjct: 576 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 635

Query: 523 KAGMWKDVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVG 582
               +     VR   KK  + K PG + +E+    H F +GDQ HPQ K IYE+L+ L G
Sbjct: 636 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 695

Query: 583 KMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGD 614
           KM+E GY P+TE ALHDVE E++E  + +HSE+LAI F ++ T+ GT IRI KNLRVC D
Sbjct: 696 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 755

[Close]

BLAST of Carg27848 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 435.6 bits (1119), Expect = 6.4e-122
Identity = 233/656 (35.52%), Postives = 372/656 (56.71%), Query Frame = 0


Query: 26  KLHSKIIVNEHLRIDPTLAIKLMRAYSANGETRVARYIFDRTLEKNVVFFNVMIRSYVNN 85
           +LH++ I  + L    T A  ++  Y+       A  +F       V+ +  +IR + + 
Sbjct: 26  QLHAQFIRTQSL--SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 85

Query: 86  NLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDSNLFIG 145
           +L+ +AL+ +  M +    PDH  FP VLK+C+ + +LR G  VH  IV++G+D +L+ G
Sbjct: 86  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 145

Query: 146 NALVAMYGKC------------------------------------GRLREARKVLDQMP 205
           NAL+ MY K                                       +   R+V + MP
Sbjct: 146 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 205

Query: 206 NRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLKLNHDAGTMASLLPVVKAESSPENVRY 265
            +DVVS+N+++AGYAQSG ++DAL + +EM +  L  D+ T++S+LP+          + 
Sbjct: 206 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 265

Query: 266 VH-------------------NMFEKMAR-------------KSLVSWNVMIAIYVNNSM 325
           +H                   +M+ K AR             +  +SWN ++A YV N  
Sbjct: 266 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 325

Query: 326 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENA 385
            NEA+ LF QM    +KP AV  +S++PAC  L+ L LG++LH Y+ +     N+ + +A
Sbjct: 326 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 385

Query: 386 LLDMYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPD 445
           L+DMY+KCG ++ AR +FD+M + D VSWT+++  +   G G++AV+LF +M   G+ P+
Sbjct: 386 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 445

Query: 446 SISFVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFI 505
            ++FV+VL+ACSH G +++   YF+ MT+ Y +   +EH+A + DL GRAG++EEAY+FI
Sbjct: 446 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 505

Query: 506 KQMPMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWK 565
            +M +EP   VW  LLS+C VH  +++    A+ +F +  +  G YVL+ N+YA  G WK
Sbjct: 506 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 565

Query: 566 DVMNVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELG 614
           ++  +R  M+K G++K P  S +E+K + H F++GD+ HP    I E L  ++ +M++ G
Sbjct: 566 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 625

[Close]

BLAST of Carg27848 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 435.3 bits (1118), Expect = 8.3e-122
Identity = 228/593 (38.45%), Postives = 349/593 (58.85%), Query Frame = 0


Query: 63  IFDRTLEKNVVF-FNVMIRSYVNNNLYVEALSIYQVMSSCAFNPDHYTFPCVLKACSGLD 122
           +F+R ++K  VF +N +I     +    EAL  +  M   +  P   +FPC +KACS L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 123 NLRVGLQVHDAIVKVGLDSNLFIGNALVAMYGKCGRLREARKVLDQMPNRDVVSWNSMVA 182
           ++  G Q H      G  S++F+ +AL+ MY  CG+L +ARKV D++P R++VSW SM+ 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 183 GYAQSGQFDDALEICKE-------------MDS--------------------------L 242
           GY  +G   DA+ + K+             +DS                          +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 243 KLNHDAG-TMASLLPVVKAESSPENVRYVHNMFEKMARKSLVSWNVMIAIYVNNSMPNEA 302
           K   D G ++ + L    A+     V     +F+++  K  VS+N ++++Y  + M NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 303 VSLFLQMEECGMKP-DAVTIASLLPACGDLSALFLGRRLHKYIEKDNLLPNLLLENALLD 362
             +F ++ +  +   +A+T++++L A     AL +G+ +H  + +  L  ++++  +++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 363 MYAKCGCLEEARDVFDKMKLRDVVSWTSMMSAYGKSGQGYDAVALFVKMLDSGLNPDSIS 422
           MY KCG +E AR  FD+MK ++V SWT+M++ YG  G    A+ LF  M+DSG+ P+ I+
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 423 FVSVLSACSHAGFLEQGRRYFHIMTEQYRIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 482
           FVSVL+ACSHAG   +G R+F+ M  ++ + P +EH+ CMVDL GRAG +++AY  I++M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 483 PMEPNERVWGALLSACRVHSKMDIGLIAADCLFQLAPKQSGYYVLLSNIYAKAGMWKDVM 542
            M+P+  +W +LL+ACR+H  +++  I+   LF+L     GYY+LLS+IYA AG WKDV 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 543 NVRNAMKKIGIKKVPGISNVELKGQVHTFLAGDQYHPQAKSIYEELDLLVGKMKELGYIP 602
            VR  MK  G+ K PG S +EL G+VH FL GD+ HPQ + IYE L  L  K+ E GY+ 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 603 QTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKHGTPIRITKNLRVCGDCH 614
            T S  HDV+ E+KE  L +HSEKLAI F I+NT  G+ + + KNLRVC DCH
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCH 623

The following BLAST results are available for this feature:

BLAST of Carg27848 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029999.1	0.0e+00	100.00	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022946769.1	0.0e+00	99.51	putative pentatricopeptide repeat-containing protein At3g49142 [Cucurbita moscha...	[more]
XP_023546028.1	0.0e+00	99.02	putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucur...	[more]
XP_022999640.1	0.0e+00	98.69	putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 [Cucur...	[more]
KAG6599061.1	0.0e+00	99.66	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]

BLAST of Carg27848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C899	2.7e-234	65.12	Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th...	[more]
Q9LTV8	1.5e-123	35.49	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9SUH6	1.4e-121	36.88	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	9.0e-121	35.52	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9LW32	1.2e-120	38.45	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]

BLAST of Carg27848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Z8	0.0e+00	99.51	putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucurbita mosc...	[more]
A0A6J1KDN5	0.0e+00	98.69	putative pentatricopeptide repeat-containing protein At3g49142 isoform X1 OS=Cuc...	[more]
A0A0A0KE24	0.0e+00	91.50	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4042...	[more]
A0A1S3C3E6	0.0e+00	91.50	putative pentatricopeptide repeat-containing protein At3g49142 OS=Cucumis melo O...	[more]
A0A6J1DSL6	0.0e+00	89.40	putative pentatricopeptide repeat-containing protein At3g49142 OS=Momordica char...	[more]

BLAST of Carg27848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49142.1	1.9e-235	65.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G12770.1	1.1e-124	35.49	mitochondrial editing factor 22	[more]
AT4G30700.1	9.9e-123	36.88	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	6.4e-122	35.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	8.3e-122	38.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 15..122 e-value: 3.8E-11 score: 45.0 coord: 396..586 e-value: 1.8E-11 score: 46.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 292..395 e-value: 4.4E-26 score: 93.3 coord: 123..222 e-value: 7.6E-22 score: 79.5 coord: 223..291 e-value: 1.2E-12 score: 49.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 43..438
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 75..106 e-value: 1.2E-4 score: 20.0 coord: 344..378 e-value: 5.4E-7 score: 27.4 coord: 146..173 e-value: 5.5E-4 score: 17.9 coord: 174..204 e-value: 9.8E-7 score: 26.6 coord: 316..344 e-value: 1.3E-5 score: 23.0 coord: 243..277 e-value: 6.4E-8 score: 30.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 146..172 e-value: 0.0011 score: 19.1 coord: 419..441 e-value: 0.033 score: 14.4 coord: 174..201 e-value: 2.0E-7 score: 30.8 coord: 485..511 e-value: 0.21 score: 11.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 241..287 e-value: 5.3E-10 score: 39.4 coord: 70..117 e-value: 6.6E-9 score: 35.8 coord: 341..389 e-value: 7.3E-10 score: 38.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..341 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 12.046526
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..171 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 241..275 score: 11.32308
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..206 score: 11.23539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 71..105 score: 9.536388
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 515..613 e-value: 2.2E-29 score: 101.9
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 6..613
None	No IPR available	PANTHER	PTHR47924:SF26	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATED	coord: 6..613

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27848-RA	Carg27848-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding